DY262954

Overview
NameDY262954
Unique NameDY262954
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN21_ARATH (Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.560e-31
Identity = 90/249 (36.14%), Postives = 131/249 (52.61%), Query Frame = 1
Query:   97 DYGDALSKSILFFEGQRSGYLPQD-QRLAWRGNSGLSDG----WTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDS-MPPHELRNALVAVRWATDYLLKIV-SQPNRIFVQV-----------GDPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            +Y  AL  ++ FF  Q+SG LP++   ++WR +S L DG         DLVGGYYDAGD++KFNFPMS+  T+LSWS+IE+        EL +    ++W TDY LK   S  + I+V V            + + DH CW RPED+  +RTV      ++ SD+              F+ +   Y++ L+  A   ++FA + R  YS N      +  FY +   ++DELLWG AWL  A+ + TY
Sbjct:  108 NYTIALRTALKFFNAQQSGKLPKNIYNVSWRHDSCLQDGKGDPGQCYKDLVGGYYDAGDSIKFNFPMSYAMTMLSWSVIEYSAKYQAAGELEHVKELIKWGTDYFLKTFNSSADNIYVMVEQVGSGVSGRGSELHNDHYCWMRPEDIHYKRTV--SQCYSSCSDLAAEMAAALASASIVFKDNRL-YSKNLVHGAKTLYRFATTSRNRYSQNGK---ESSKFY-NSSMFEDELLWGGAWLYYATGNVTY 349          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.972e-29
Identity = 89/265 (33.58%), Postives = 135/265 (50.94%), Query Frame = 1
Query:   61 LPTLLIAAVVGH--------DYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTD-LVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPP-HELRNALVAVRWATDYLL----KIVSQPNRIFVQVG------DPNIDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQF--ADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTY 789
            LP +++ ++  H        +Y  AL K++ FF+ Q+SG LP+  +++WRG+SG  DG       LVGGYYD G NVKF+FPM+F+ T+LSWS+IE+        E  +    ++W TDYLL       ++ + I+ QVG      +   D  CW++PEDM  +R V    +  +A+D+              F +    YA+ L + A   + F  + S R  YSD    +  A  FY     + DE +W  AWL  A+ + TY
Sbjct:   96 LPIIIVKSLPRHKSAPPPPDNYTLALHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDGLPDVVGGLVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDYLLLTFNNSATRLDHIYTQVGGGLRDSESPDDIYCWQKPEDMSYDRPVL---SSTSAADLGAEVSAALAAASIVF-TDKPDYAKKLKKGAETLYPFFRSKSRRKRYSDG---QPTAQAFYNSTSMF-DEFMWAGAWLYYATGNKTY 352          
BLAST of DY262954 vs. ExPASy Swiss-Prot
Match: GUNX_PRUPE (Endoglucanase CX (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.042e-24
Identity = 56/114 (49.12%), Postives = 68/114 (59.65%), Query Frame = 1
Query:  472 PEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLKRASQDDTYPYYIEMNG 813
            PEDMDT R VY V   N  SDV              F+ SD  Y+  LL  A+K F FAD YRG+YSD  +I    CPFYC + G+ DELLWGA+W+ RASQ+ +Y  YI+ NG
Sbjct:    1 PEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASIVFKDSDPSYSGKLLHTAMKVFDFADRYRGSYSD--SIGSVVCPFYCSYSGHHDELLWGASWIHRASQNRSYLVYIKSNG 112          
The following BLAST results are available for this feature:
BLAST of DY262954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN21_ARATH2.560e-3136.14Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 P... [more]
GUN7_ARATH6.972e-2933.58Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUNX_PRUPE1.042e-2449.12Endoglucanase CX (Fragment) OS=Prunus persica PE=2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BF12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262954 ID=DY262954; Name=DY262954; organism=Citrus clementina; type=EST; length=1192bp
CTTCATTACCCACAAGACCCACCGGCCACCATGAAGAAGAAGCTCCGATT
TTCATTTCTATTGCCTACTCTACTCATCGCGGCTGTTGTTGGCCACGACT
ACGGCGACGCATTGTCCAAGTCGATCCTCTTCTTCGAAGGCCAGCGCTCG
GGTTACCTGCCGCAGGACCAGCGCCTCGCTTGGCGTGGCAATTCCGGCCT
CAGCGATGGCTGGACGTACAACACCGACCTGGTTGGCGGCTACTACGACG
CCGGCGATAACGTCAAGTTCAATTTCCCCATGTCATTCACCACCACTCTC
TTATCTTGGAGCATCATCGAATTCGGAGACTCCATGCCTCCCCATGAGCT
GAGAAATGCACTCGTCGCTGTCCGCTGGGCCACTGATTATCTCCTCAAGA
TCGTTTCTCAGCCTAATCGGATTTTTGTCCAGGTGGGGGATCCTAATATT
GATCACAACTGTTGGGAGAGACCAGAGGATATGGACACAGAAAGGACTGT
GTATGCAGTTGATGCACCAAATGCAGCTTCTGATGTAGCTGGCGAGACTG
CAGCCGCTCTAGCAGCTGCATCCATGGCGTTCCGGTCTTCGGACTCGGGA
TACGCAGAGACATTGCTGAGAAATGCTGTCAAGGCGTTTCAATTTGCAGA
CAGTTACAGGGGAGCTTATAGTGACAACCCTAATATCAGAGATGGTGCCT
GCCCATTTTACTGTGACTTTGATGGATACCAAGATGAGTTGCTTTGGGGA
GCAGCTTGGTTAAAAAGAGCTTCTCAGGATGACACTTACCCTTATTACAT
TGAAATGAATGGCAAACACTTGGTGCTGATGAAAATATTAATGATTTGGG
CTGGGACATAAGCATGCTGGCATAAATGTTCTAGTCTCCAGGGAAGACTA
AAAGCTAACGAGTAAACTCTGCAATCATACAAAGCCTCACCTGAAACCTT
CATGTGCCCGTTAGTCCCCGAAATCATCCTCCTCCCACTCCGATTACAGC
CCCCGGGGGCCAAATCAACAACCTGGGGGGCAGCAACCTGCGACAAGGCC
CAAACCCTTTCCTTTTCTGCCTTCGGGTTTTTGCAAATTTCCTAAACCCA
AAATTTCCCAAACTCGGTTACTTGGGGGCAACCCTTTTAGTTTTCCCCCC
CCTTTCCCCTTCTCCTTGGGGAACCCACAAAAAACAAAGTTT
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