DY262963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.881e-15 Identity = 58/184 (31.52%), Postives = 82/184 (44.57%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 ++V NLP VD L LF G + V+V+ D +G SR FGFV EE + A NG E+ GR L +YV NL +DD L F G + AKV+ E G S+GFGFV +SS EE A+ +NG + + + V++A+ + + Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEE 373 HSP 2 Score: 81.2629 bits (199), Expect = 1.344e-14 Identity = 58/181 (32.04%), Postives = 82/181 (45.30%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +F+ NL S+D+ L F T GN+ +V D+ SRGFGFV + E + A NG L R + V +YV NL VD+ L+ LF + GK+L KV+ D SG SR FGFV + EE A+ +NG +++GR + A+ R Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEF---------TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.029e-14 Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYEL-EGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 ++V N D +L FE G + +V+ K G+S+GFGFV + E EAA Q NG ++ EG+ L V +YV NL +DD L F G + AKV+ D E GRS+GFGFV +++A E A+ LNG + + + V++A+ + + Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEE 367 HSP 2 Score: 76.2554 bits (186), Expect = 4.324e-13 Identity = 49/175 (28.00%), Postives = 79/175 (45.14%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRV 875 L+VG+LP V+ + L F +AG V + V D +T RS G+ +V + E A N + +P+R+ V++ NL +D+ A+ F G +L KV D E G S+G+GFV + + E + +ID +NG+ L G+ + V Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRI---------------MWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162 HSP 3 Score: 76.2554 bits (186), Expect = 4.324e-13 Identity = 56/212 (26.42%), Postives = 94/212 (44.34%), Query Frame = 3 Query: 261 VRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLA-GRAIRVSVAEAR 893 VRN + + Q + L N +F+ NL ++D+ + F GN+ +V D+ G S+G+GFV + E + + NG L G+ + V VYV N + DD L+ F GK+ KV+ +E G+S+GFGFV + + E + A+ +LNG D+ G+++ V+ A+ + Sbjct: 68 VRNKPIRIMWSQRDPSLRRSGVGN------VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVG---------KFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.029e-14 Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 657 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHKG 902 R +VG L+W +D L+ F + G V+++K++ DRESGRSRGFGFVT+ + + +AI+ +NG +L GR I V+ A++R G Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSG 88
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.029e-14 Identity = 48/192 (25.00%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 321 DGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 +G+ L V LP ++ + LF + G++E +++ DK+TG+S G+GFV S + + A NG +L+ + ++V+ +YV L + +E LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G A ++V A + Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 1.344e-14 Identity = 48/192 (25.00%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 321 DGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 +G+ L V LP ++ + LF + G++E +++ DK+TG+S G+GFV S + + A NG +L+ + ++V+ +YV L + +E LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G A ++V A + Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.756e-14 Identity = 36/82 (43.90%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 657 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHKG 902 R +VG L+W +D +LE F + G + ++K++ DRE+GRSRGFGFVT+ + + +AI+ +NG +L GR I V+ A++R G Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRGSG 88
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.756e-14 Identity = 49/193 (25.39%), Postives = 87/193 (45.08%), Query Frame = 3 Query: 318 EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 + G+ L V LP ++ +L LF + G +E +++ DK+TG+S G+GFV ++ E A NG L+ + ++V+ +YV L + LE LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G ++V A + Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.756e-14 Identity = 49/193 (25.39%), Postives = 87/193 (45.08%), Query Frame = 3 Query: 318 EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 + G+ L V LP ++ +L LF + G +E +++ DK+TG+S G+GFV ++ E A NG L+ + ++V+ +YV L + LE LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G ++V A + Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.756e-14 Identity = 49/193 (25.39%), Postives = 87/193 (45.08%), Query Frame = 3 Query: 318 EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 + G+ L V LP ++ +L LF + G +E +++ DK+TG+S G+GFV ++ E A NG L+ + ++V+ +YV L + LE LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G ++V A + Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 2.293e-14 Identity = 56/196 (28.57%), Postives = 88/196 (44.90%), Query Frame = 3 Query: 291 DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVS 878 DQ++ E S + L+VG+L SV A L +F G+V + V D +T S G+ +V + E A +Q N ++GR R+ +++ NL +D+ AL F G +L +K+ D E+G+S+GFGFV + AID+LNG+ L G+ I V+ Sbjct: 20 DQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRI---------------MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 HSP 2 Score: 70.0922 bits (170), Expect = 3.099e-11 Identity = 56/201 (27.86%), Postives = 86/201 (42.79%), Query Frame = 3 Query: 294 QEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +E D +E ++++ L+V N+ Q LF G + + D G+ +GFGFV E+ A + N EL G L V ++V NL VDD LE F G + AKV+ E+G+S+GFGFV +S+ EE AI N +AG+ + V++A+ + Sbjct: 205 KERDSQLEETKAHYT---NLYVKNINSETTDEQFQELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRK 400 The following BLAST results are available for this feature:
BLAST of DY262963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262963 ID=DY262963; Name=DY262963; organism=Citrus clementina; type=EST; length=1246bpback to top |