DY262963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.138e-13 Identity = 57/213 (26.76%), Postives = 90/213 (42.25%), Query Frame = 3 Query: 267 NVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAG--RAIRVSVAEARHK 899 N + S + S G+N S L V LP + +L LF T G + ++ D TG S G+GFV S + A NG + + ++V+ +YV NLS + D LET+F + G++++ ++ D+ +G RG F+ ++ EE AI +LN V G + + V VAE K Sbjct: 53 NCGLGSVGNMANSTNSLNSGTNNS-GTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRD-----------------TNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEEHGK 247
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.138e-13 Identity = 54/195 (27.69%), Postives = 90/195 (46.15%), Query Frame = 3 Query: 318 EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 E G+ +++ N ++ +L +F G V+V+ D G+S+GFGFV+ E+ + A + NG ++ G+ + V +YV NL G+DD L F G + AKV+ E GRS+GFGFV +SS EE A+ +NG +A + + V++A+ + + Sbjct: 182 ELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373 HSP 2 Score: 76.6406 bits (187), Expect = 3.311e-13 Identity = 54/185 (29.19%), Postives = 83/185 (44.86%), Query Frame = 3 Query: 339 PDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 P L+VG+L V A L F AG + + V D +T RS G+ +V + E A N ++GRP+R+ +++ NL +D+ AL F G +L KVV D E+G S+G+GFV + + E + AID +NG+ L R + V ++R Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRI---------------MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV2_RAT (ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.138e-13 Identity = 48/193 (24.87%), Postives = 86/193 (44.56%), Query Frame = 3 Query: 318 EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 + G+ L LP ++ +L LF + G +E +++ DK+TG+S G+GFV ++ E A NG L+ + ++V+ +YV L + LE LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G ++V A + Sbjct: 30 DSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 205
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV1_HUMAN (ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.138e-13 Identity = 48/186 (25.81%), Postives = 83/186 (44.62%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHKGVN 908 L V LP ++ +L LF + G VE ++I DKV G S G+GFV + ++ E A NG L+ + ++V+ +Y+ L + +E +F G+++ ++V+ D+ +G SRG F+ + E + AI S NG G + ++V A + N Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDA-----------------NLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQN 190
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PUF60_RAT (Poly(U)-binding-splicing factor PUF60 OS=Rattus norvegicus GN=Puf60 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 43/179 (24.02%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 884 +++VG++ + + + F G ++ +++ +D VT + +GF FV E + A +Q N L GR ++V NR+YV ++ + D ++++F GK+ + D +G+ +G+GF+ Y A+ +A+ S+N DL G+ +RV A Sbjct: 135 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAF------NRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 307
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PUF60_PONAB (Poly(U)-binding-splicing factor PUF60 OS=Pongo abelii GN=PUF60 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 43/179 (24.02%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 884 +++VG++ + + + F G ++ +++ +D VT + +GF FV E + A +Q N L GR ++V NR+YV ++ + D ++++F GK+ + D +G+ +G+GF+ Y A+ +A+ S+N DL G+ +RV A Sbjct: 129 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAF------NRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 301
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PUF60_MOUSE (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus GN=Puf60 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 43/179 (24.02%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 884 +++VG++ + + + F G ++ +++ +D VT + +GF FV E + A +Q N L GR ++V NR+YV ++ + D ++++F GK+ + D +G+ +G+GF+ Y A+ +A+ S+N DL G+ +RV A Sbjct: 135 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAF------NRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 307
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PUF60_HUMAN (Poly(U)-binding-splicing factor PUF60 OS=Homo sapiens GN=PUF60 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 43/179 (24.02%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 884 +++VG++ + + + F G ++ +++ +D VT + +GF FV E + A +Q N L GR ++V NR+YV ++ + D ++++F GK+ + D +G+ +G+GF+ Y A+ +A+ S+N DL G+ +RV A Sbjct: 130 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAF------NRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 302
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PUF60_BOVIN (Poly(U)-binding-splicing factor PUF60 OS=Bos taurus GN=PUF60 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 43/179 (24.02%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 884 +++VG++ + + + F G ++ +++ +D VT + +GF FV E + A +Q N L GR ++V NR+YV ++ + D ++++F GK+ + D +G+ +G+GF+ Y A+ +A+ S+N DL G+ +RV A Sbjct: 101 RVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAF------NRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKA 273
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-13 Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +FV N+ +D +L LF G E V+VI D +G+S+GFGFV + E + A +G ++G+ L V +Y+ NL ++D L+ F G + AKV+ E G+ +GFG V +SS EE A+D +NG + + + V++ +AR + Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRR 381 HSP 2 Score: 70.8626 bits (172), Expect = 1.817e-11 Identity = 51/181 (28.18%), Postives = 78/181 (43.09%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +F+ NL S+D+ L LF GN+ +V+ D S+G+ +V S+ A NG L R + V V+V N+ +DD L+ LF E G KV+ D SG+S+GFGFV Y + E A+ L+G + G+ + V A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF--------TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKK 277 The following BLAST results are available for this feature:
BLAST of DY262963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262963 ID=DY262963; Name=DY262963; organism=Citrus clementina; type=EST; length=1246bpback to top |