DY262963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: GBP2_YEAST (Single-strand telomeric DNA-binding protein GBP2 OS=Saccharomyces cerevisiae GN=GBP2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.324e-13 Identity = 59/193 (30.57%), Postives = 87/193 (45.08%), Query Frame = 3 Query: 297 EEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRV 875 E DL D + + + +FV NL F L LF T G V ++I K G RG G V + E V+ A +F+G R L V V++ NL + ++ +L+ +F+E G VL A V D +G SRGFG V Y + +E+ AID+ NG+++ GR + V Sbjct: 106 ERDLERQFDATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGF----EVFIINLPYSMNWQSLKDMFKECGHVLRADVELDF-NGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEV 291
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV2_XENLA (ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 4.324e-13 Identity = 52/193 (26.94%), Postives = 89/193 (46.11%), Query Frame = 3 Query: 327 SNFSPDLK--LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVT-GRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 SN + D K L V LP ++ +L LF + G +E +++ DK+T G+S G+GFV ++ E A NG L+ + ++V+ +YV L + LE LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G ++V A + Sbjct: 58 SNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA-----------------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 233
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_RAT (Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_PANTR (Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_MOUSE (Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_HUMAN (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_BOVIN (Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: RA1L3_HUMAN (Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3 OS=Homo sapiens GN=HNRPA1L3 PE=5 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ELAV3_XENTR (ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.648e-13 Identity = 47/198 (23.74%), Postives = 92/198 (46.46%), Query Frame = 3 Query: 306 LLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGR-SRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 +L+ +G+ L V LP ++ + LF + G +E +++ DK+TG+S G+GFV + + A NG +L+ + ++V+ +YV +L ++ +E LF + G+++ ++++ D+ +G SRG GF+ + E + AI LNG G + ++V A + Sbjct: 22 ILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA-----------------NLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANN 202
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: RO32_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.376e-13 Identity = 50/161 (31.06%), Postives = 72/161 (44.72%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT S VEEV+A+ + RP +V+ +++VG + ++ L F GK+ +V+ DR+SG+ RGF FVT+ + VD + Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAS--------MSARPHKVD----GRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176 The following BLAST results are available for this feature:
BLAST of DY262963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262963 ID=DY262963; Name=DY262963; organism=Citrus clementina; type=EST; length=1246bpback to top |