DY262963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: RA1L2_HUMAN (Heterogeneous nuclear ribonucleoprotein A1-like protein 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 7.376e-13 Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VEEV+ AA ++++GR + +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ + VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD-AAMNTTPHKVDGRVVE-----------PKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 7.376e-13 Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +F+ NL ++D+ L F GN+ +V D++ G S+G+GFV + E A + NG L + + V +YV N+ V D LF + G + A + D + G+SRGFGFV Y E A+D LN ++ G+ + V A+ +H+ Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEL-GNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANF---------TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHE 309
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.258e-12 Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNG-YELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 KLFVG L + L+ F G++ V+ + +GRSRGFGFVT + V Q NG + L+GR + +V++G L V + L T F GKV E ++YD+E +SRGFGF+++ V++ + + ++L G+ + + AE R Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ--NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY-------------KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEH-VTNERYINLNGKQVEIKKAEPR 174
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.643e-12 Identity = 54/203 (26.60%), Postives = 96/203 (47.29%), Query Frame = 3 Query: 291 DQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARH 896 D+E +L S S F+ +++ N +D +L +F G V+V+ D +G+S+GFGFV+ S E + A ++ NG ++ G+ + V ++Y+ NL +DD L F G + KV+ +E G+S+GFG + +SS E+ A+ +NG L + + +++A+ RH Sbjct: 177 DREAELRSK--ASEFT---NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQ-RH 370 HSP 2 Score: 72.0182 bits (175), Expect = 8.155e-12 Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +F+ NL S+D+ L F G + +V+ D S+G+ FV + + A ++ NG L+G + V VY+ N +DD L+ +F + GK L KV+ D SG+S+GFGFV++ S E A++ +NG D+ G+ I V A+ + Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEF---------TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 268
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.146e-12 Identity = 48/182 (26.37%), Postives = 86/182 (47.25%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +++ NL + + + LF G + + ++ D+ + RGFGFV ++ E + A + N E +G+ L V +++ NL VDD L+ F G + AK++ D E G+S+GFGFV Y++ EE + A+ +N LAG+ + V++A+ + Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRK 442 HSP 2 Score: 72.4034 bits (176), Expect = 6.244e-12 Identity = 48/183 (26.23%), Postives = 82/183 (44.81%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +F+ NL ++D+ L F G + +V D++ G ++G+GFV SVE AA + NG L + + V VY+ NL + + LF + G++ +V D ++ + RGFGFV Y++ E A+D LN + G+ + V A+ +H+ Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANF---------TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHE 341
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.146e-12 Identity = 48/183 (26.23%), Postives = 83/183 (45.36%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +F+ NL ++D+ L F GN+ +V D+ G S+G+GFV + E A + NG L + + V VY+ NL + + +F + G++ A + D+E G+SRGFGFV YS+ + A+D +N ++ G+ + V A+ +H+ Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANF---------TNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQE-GKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHE 309
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.146e-12 Identity = 58/197 (29.44%), Postives = 87/197 (44.16%), Query Frame = 3 Query: 306 LLSDEDGSN-FSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 893 +LS+ D S S +F+ NL S+D+ L F + G + +V D V GRS+G+GFV E +AA + NG L + + V VYV NL + D L+ F + G + A V+ D +SG SR FGFV + S E A++ +NG+ L + V A+ + Sbjct: 118 MLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVG---------HFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKK 303 HSP 2 Score: 72.7886 bits (177), Expect = 4.781e-12 Identity = 58/205 (28.29%), Postives = 92/205 (44.88%), Query Frame = 3 Query: 288 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 F + +D E G+ S ++V NLP + +L F G++ V+ D+ +G SR FGFV S E A ++ NG L L V + +Y+ NL V+D L+ +F E G V KV+ + + G SRGFGFV YS+ EE A+ +NG + + + V++A+ + + Sbjct: 207 FVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEE 408
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: ROA1_MACMU (Heterogeneous nuclear ribonucleoprotein A1 OS=Macaca mulatta GN=HNRNPA1 PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 2.803e-12 Identity = 48/161 (29.81%), Postives = 72/161 (44.72%), Query Frame = 3 Query: 348 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 830 KLF+G L F L FE G + V+ D T RSRGFGFVT ++VE+V+AA + RP +V+ +++VG + ++ L F + GK+ +++ DR SG+ RGF FVT+ VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAA--------MNARPHKVD----GRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 163
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.803e-12 Identity = 48/183 (26.23%), Postives = 83/183 (45.36%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +F+ NL ++D+ L F GN+ +V D+ G S+G+GFV + E A + NG L + + V VY+ N+ V D +F + G++ A + D+E G+SRGFGFV +S+ + A+D +N ++ G+ + V A+ +H+ Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANF---------TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHE 313
BLAST of DY262963 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.803e-12 Identity = 48/183 (26.23%), Postives = 83/183 (45.36%), Query Frame = 3 Query: 351 LFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARHK 899 +F+ NL ++D+ L F GN+ +V D+ G S+G+GFV + E A + NG L + + V VY+ N+ V D +F + G++ A + D+E G+SRGFGFV +S+ + A+D +N ++ G+ + V A+ +H+ Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANF---------TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHE 313 The following BLAST results are available for this feature:
BLAST of DY262963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262963 ID=DY262963; Name=DY262963; organism=Citrus clementina; type=EST; length=1246bpback to top |