DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHB1_HUMAN (Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.257e-15
Identity = 62/196 (31.63%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN---GVRDSDIHCYLSNFLSISTVILVIFSCILVR----A*FIYTRFLKISDI 692
            EID S +K E  I +G + ++YKG           VAIK L   + +E  RR+F  E  IM +  H N+++  G  T+   + I+TEFM  G++  +L +      +  L+ +   ++ GM YL   N +HRDL A N+L+N N    V D  +  YL +  S  T    +   I VR        Y +F   SD+
Sbjct:  613 EIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGY-SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDV 807          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHB1_CHICK (Ephrin type-B receptor 1 (Fragment) OS=Gallus gallus GN=EPHB1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.257e-15
Identity = 62/196 (31.63%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN---GVRDSDIHCYLSNFLSISTVILVIFSCILVR----A*FIYTRFLKISDI 692
            EID S +K E  I +G + ++YKG           VAIK L   + +E  RR+F  E  IM +  H N+++  G  T+   + I+TEFM  G++  +L +      +  L+ +   ++ GM YL   N +HRDL A N+L+N N    V D  +  YL +  S  T    +   I VR        Y +F   SD+
Sbjct:  613 EIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGY-SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDV 807          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.257e-15
Identity = 62/196 (31.63%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN---GVRDSDIHCYLSNFLSISTVILVIFSCILVR----A*FIYTRFLKISDI 692
            EID S +K E  I +G + ++YKG           VAIK L   + +E  RR+F  E  IM +  H N+++  G  T+   + I+TEFM  G++  +L +      +  L+ +   ++ GM YL   N +HRDL A N+L+N N    V D  +  YL +  S  T    +   I VR        Y +F   SD+
Sbjct:  531 EIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGY-SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIRYRKFTSASDV 725          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FES_MOUSE (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Mus musculus GN=Fes PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.948e-15
Identity = 44/145 (30.34%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            D W +    L    +I  G++ +++ G   + +  + V +  E L  +++ +F QE  I+++  H N+V+ IG CT+   ++IV E + GG    +L  +   L++  LL++  D + GM YL     IHRDL A N L+ E  V
Sbjct:  552 DKWVLKHEDLVLGEQIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYNHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV 696          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BLK_HUMAN (Tyrosine-protein kinase Blk OS=Homo sapiens GN=BLK PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 2.948e-15
Identity = 48/143 (33.57%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            D WEI    L+   K+ SG + +++ G + +   VAIK L    ++      F  E ++M+ ++H  +V+     T+ P ++IVTE+M+ G + D+L   +   L LP L+ ++  +++GM Y+ R N IHRDL+AAN+L++E
Sbjct:  232 DEWEIPRQSLRLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSPEA---FLGEANVMKALQHERLVRLYAVVTKEP-IYIVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQIAEGMAYIERMNSIHRDLRAANILVSE 370          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y9849_DICDI (Probable serine/threonine-protein kinase DDB_G0278535 OS=Dictyostelium discoideum GN=DDB_G0278535 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.850e-15
Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  129 IDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR--NNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            ++ W ID S L++  K+ SGS   +YKG +  ++VA+KVL +      +  EF +E  IM  +R   +V F GAC   P+L +V E+ S  S+Y  ++ +K  +      +  + ++ G+  LH     I+HRD K+ NLL+NE      D  C +S+F
Sbjct:  519 LEHWVIDHSELEYTLKLGSGSSGKVYKGLYKGKEVAVKVLKSITTQSQL-EEFKKEFQIMGSIRSQFMVTFYGACIE-PKLCMVMEYCSRDSLYHVMNTKKYDIGWDRFFQFTMQMTLGVQCLHNWTPQIVHRDFKSLNLLVNE------DWECKVSDF 669          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLMN 551
            KI +GS+  +YK  +  + VAIKVL  E  +E I   F +E  I+  V   N+++F GAC +  +L +VTE+   GS+Y  + K+K  +  PL+ +       G+N LH  R  ++HRD+K+ NLL+N
Sbjct: 1481 KIGAGSFSKVYKAKYMGEIVAIKVLKGEATSEQIEL-FKKEYDILSLVSSQNLIKFYGAC-KEKKLRMVTEYCQHGSLYHIMSKRKMDISWPLVFKWMHQAVDGINSLHTMRPALVHRDIKSQNLLIN 1606          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: LCK_HUMAN (Proto-oncogene tyrosine-protein kinase LCK OS=Homo sapiens GN=LCK PE=1 SV=6)

HSP 1 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 47/159 (29.56%), Postives = 92/159 (57.86%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            D WE+    LK   ++ +G + +++ G +     VA+K L    ++ +    F  E ++M++++H  +V+     T+ P ++I+TE+M  GS+ D+L K   G+KL +  LL +A  +++GM ++   N IHRDL+AAN+L+++       + C +++F
Sbjct:  236 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 383          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 47/159 (29.56%), Postives = 92/159 (57.86%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            D WE+    LK   ++ +G + +++ G +     VA+K L    ++ +    F  E ++M++++H  +V+     T+ P ++I+TE+M  GS+ D+L K   G+KL +  LL +A  +++GM ++   N IHRDL+AAN+L+++       + C +++F
Sbjct:  236 DEWEVPRETLKLVERLGAGQFGEVWMGYYNDHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 383          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 57/158 (36.08%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  183 SGSYCDLYKGAFFSQDV-AIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH-KQKCGLKL--PLLLRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMNEN-GVRDSD-----IHCYLSNFLSISTV 617
            SG + D+YK       V AIK L   H++    REF  E+  + K++H N+V  +G C       +V E+M  GS+ D LH ++K G+KL  P   ++AI  ++G+ +LH N   +IIHRD+K++N+L++EN   R SD     +   +   LS+ST+
Sbjct:  896 SGGFGDVYKAQLKDGSVVAIKKLI--HVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTL 1051          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
EPHB1_HUMAN2.257e-1531.63Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 ... [more]
EPHB1_CHICK2.257e-1531.63Ephrin type-B receptor 1 (Fragment) OS=Gallus gall... [more]
EPB1B_XENLA2.257e-1531.63Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]
FES_MOUSE2.948e-1530.34Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
BLK_HUMAN2.948e-1533.57Tyrosine-protein kinase Blk OS=Homo sapiens GN=BLK... [more]
Y9849_DICDI3.850e-1533.33Probable serine/threonine-protein kinase DDB_G0278... [more]
Y9844_DICDI5.029e-1537.50Probable serine/threonine-protein kinase DDB_G0282... [more]
LCK_HUMAN5.029e-1529.56Proto-oncogene tyrosine-protein kinase LCK OS=Homo... [more]
LCK_AOTNA5.029e-1529.56Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
BRI1_SOLPE5.029e-1536.08Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
back to top