DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.133e-21
Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RAF1_CHICK (RAF proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.133e-21
Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.133e-21
Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 478          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 6.133e-21
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI  + +  +HK+  G Y ++Y+  +  +   VA+K L  + +     ++F +E  IM++++H N+VQ IG CTR P  +I+TEFMS G++ D+L    +  L    LL +A  ++ GM+YL   N IHRDL A N L+ +N
Sbjct:  362 DEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTM---ALKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRSAGRETLDAVALLYMATQIASGMSYLESRNYIHRDLAARNCLVGDN 503          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.046e-20
Identity = 60/145 (41.38%), Postives = 91/145 (62.76%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLF-IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR--NNIIHRDLKAANLLMNENG 560
            + +  S ++F   I SGS+  +YKG   ++ VAIK    N + +++    F +EV I+ ++ H  V+QF+GAC   P  F IVT+++SGGS++  LH+QK  L L   L +A+DV+KGM YLH     IIHRDL + N+L+ E+G
Sbjct:  557 FHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDG 701          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ABL2_MOUSE (Tyrosine-protein kinase ABL2 OS=Mus musculus GN=Abl2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.046e-20
Identity = 53/147 (36.05%), Postives = 86/147 (58.50%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            D WE++ + +  +HK+  G Y ++Y G +  +S  VA+K    + +      EF +E  +M++++H N+VQ +G CT  P  +IVTE+M  G++ DYL +  +  +   +LL +A  +S  M YL + N IHRDL A N L+ EN V
Sbjct:  279 DKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTFKEDTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHV 422          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 1.046e-20
Identity = 57/182 (31.32%), Postives = 97/182 (53.30%), Query Frame = 3
Query:   54 HHHVVYPVG---------EQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLL-RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            HHH V+  G          ++  G    ++     D WE+D S +   +K+  G Y D+Y+G +   D  +A+K L  + +  +   EF  E  IM+ + H N+V+ +G CT     +I+TEFM  G++ +YL +    L  P++L ++A  ++ GM+YL   + IHRDL A N L++E+ +
Sbjct:  267 HHHSVHADGLICLLMYPASKKDKGRGLFSLSPNAPDEWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLH---EFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNI 445          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 1.784e-20
Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLF-IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLMNENG 560
            + +  S ++F   I SGS+  +YKG   ++ VAIK    N + +++    F +EV I+ ++ H  VVQF+GAC   P  F IVT+++SGGS++  LH+QK  L L   L +A+DV+KGM YLH     IIHRDL + N+L+ E+G
Sbjct:  456 FHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDG 600          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 1.784e-20
Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLF-IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLMNENG 560
            + +  S ++F   I SGS+  +YKG   ++ VAIK    N + +++    F +EV I+ ++ H  VVQF+GAC   P  F IVT+++SGGS++  LH+QK  L L   L +A+DV+KGM YLH     IIHRDL + N+L+ E+G
Sbjct:  455 FHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVVQFVGACLDDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDG 599          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.331e-20
Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            D+WEI    +    K+ +G + ++Y+G +  S  VA+K L    +       F  E  IM+K+RH  ++Q    CT+   ++I+TE MS GS+ DYL  +   LKLP L+ +A  V+ GM YL  +N IHRDL A N+L+ +N +
Sbjct:   86 DMWEISRDSITLIRKLGAGQFGEVYQGLWNNSTPVAVKTLKAGTMQP---AAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYLQGEAGALKLPQLIDMAAQVAAGMAYLELHNYIHRDLAARNILVGDNNI 227          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
RAF1_HUMAN6.133e-2138.85RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_CHICK6.133e-2138.85RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN6.133e-2138.85RAF proto-oncogene serine/threonine-protein kinase... [more]
ABL_DROME6.133e-2137.24Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
TNI3K_HUMAN1.046e-2041.38Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]
ABL2_MOUSE1.046e-2036.05Tyrosine-protein kinase ABL2 OS=Mus musculus GN=Ab... [more]
ABL1_CAEEL1.046e-2031.32Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
TNI3K_RAT1.784e-2042.07Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
TNI3K_MOUSE1.784e-2042.07Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
SRK2_SPOLA2.331e-2037.24Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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