DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14824 contig Ccv1_Contig14824:251..1572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.044e-20
Identity = 52/139 (37.41%), Postives = 87/139 (62.59%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            W+++AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E
Sbjct:   17 WKMEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 153          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.044e-20
Identity = 53/138 (38.41%), Postives = 86/138 (62.32%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 551
            WEI+AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++
Sbjct:   75 WEIEASEVLLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 210          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.044e-20
Identity = 54/176 (30.68%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   36 IPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            IP++ +HH+    V   ++SG+  +N P      W ++   +     +  G++ ++YKG    +         E L + ++ +F QE  I+++  H N+V+ IG CT+   ++I+ E + GG    +L K+K  +KL  L++ ++D + GM+YL   N IHRDL A N L+ EN V
Sbjct:  524 IPQLIDHHYTTKQV-ITKKSGVVLLN-PIPKDKKWVLNHEDVTLGELLGKGNFGEVYKGILKDKTAVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPIYIIMELVPGGDFLSFLRKKKDEIKLKQLVKFSLDAASGMSYLESKNCIHRDLAARNCLVGENNV 697          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PYK3_DICDI (Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum GN=pyk3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.975e-20
Identity = 53/138 (38.41%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            EI    +    K+ +GS+ +++ G +    VAIK+L NE ++ +   +F +EV  + K  H NVV F+GAC  PP +F  TE++ GGS+YD LH QK  L   ++ ++  D+S GM +LH   ++HRDL + N+L++E
Sbjct: 1051 EIKFDEVAIVEKVGAGSFANVFLGIWNGYKVAIKILKNESISND--EKFIKEVSSLIKSHHPNVVTFMGACIDPPCIF--TEYLQGGSLYDVLHIQKIKLNPLMMYKMIHDLSLGMEHLHSIQMLHRDLTSKNILLDE 1184          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BTK_HUMAN (Tyrosine-protein kinase BTK OS=Homo sapiens GN=BTK PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 3.975e-20
Identity = 60/190 (31.58%), Postives = 99/190 (52.11%), Query Frame = 3
Query:   24 LAKEIPKVENHHH---------VVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            L   IP++ N+H          + YPV +Q ++  +   +   G   WEID   L F  ++ +G +  +  G +  Q DVAIK++    ++E+   EF +E  +M  + H  +VQ  G CT+   +FI+TE+M+ G + +YL + +   +   LL +  DV + M YL     +HRDL A N L+N+ GV
Sbjct:  351 LFSTIPELINYHQHNSAGLISRLKYPVSQQNKNAPSTAGL---GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV 534          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TXK_HUMAN (Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 5.192e-20
Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 551
            WEID S L F  +I SG +  ++ G + S   VAIK +    ++E    +F +E  +M K+ H  +VQ  G C +   L+IVTEFM  G + +YL + K  L+  +LL V  D+ +GM YL RN  IHRDL A N L++
Sbjct:  264 WEIDPSELAFIKEIGSGQFGVVHLGEWRSHIQVAIKAINEGSMSEE---DFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVS 399          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BTK_MOUSE (Tyrosine-protein kinase BTK OS=Mus musculus GN=Btk PE=1 SV=4)

HSP 1 Score: 99.3673 bits (246), Expect = 5.192e-20
Identity = 60/190 (31.58%), Postives = 99/190 (52.11%), Query Frame = 3
Query:   24 LAKEIPKVENHHH---------VVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            L   IP++ N+H          + YPV +Q ++  +   +   G   WEID   L F  ++ +G +  +  G +  Q DVAIK++    ++E+   EF +E  +M  + H  +VQ  G CT+   +FI+TE+M+ G + +YL + +   +   LL +  DV + M YL     +HRDL A N L+N+ GV
Sbjct:  351 LFSTIPELINYHQHNSAGLISRLKYPVSKQNKNAPSTAGL---GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV 534          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TEC_MOUSE (Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 3
Query:   69 YPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            YPV  +   G N         D WEI+ S L F  ++ SG +  +  G + +Q  VAIK +    + E    +F +E  +M K+ H  +VQ  G CT+   ++IVTEFM  G + ++L +++      +LL +  DV +GM YL RN+ IHRDL A N L+NE GV
Sbjct:  342 YPVSTK---GKNAPTTAGFSYDKWEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEE---DFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVNEAGV 501          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRK1_SPOLA (Tyrosine-protein kinase isoform SRK1 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 51/143 (35.66%), Postives = 87/143 (60.84%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            WEI+ + +K   ++ +G + ++++G +  +  VA+K L    ++     EF QE  IM+++RH  ++Q    CT+   ++IVTE M  GS+ +YL  +   LK+  L+ VA  V+ GM+YL + N IHRDL A N+L+ E+G+
Sbjct:  233 WEIEKTQIKLLRRLGAGQFGEVWEGLWNGTTSVAVKTLKPGTMSVE---EFLQEASIMKRLRHPKLIQLYAVCTKEEPIYIVTELMKYGSLLEYLRGEDGVLKIEQLVDVAAQVASGMSYLEQQNYIHRDLAARNILVGEHGI 372          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:   58 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 197          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
RAF_MSV363.044e-2037.41Serine/threonine-protein kinase-transforming prote... [more]
MIL_AVIMH3.044e-2038.41Serine/threonine-protein kinase-transforming prote... [more]
FER_CANFA3.044e-2030.68Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
PYK3_DICDI3.975e-2038.41Dual specificity protein kinase pyk3 OS=Dictyostel... [more]
BTK_HUMAN3.975e-2031.58Tyrosine-protein kinase BTK OS=Homo sapiens GN=BTK... [more]
TXK_HUMAN5.192e-2040.29Tyrosine-protein kinase TXK OS=Homo sapiens GN=TXK... [more]
BTK_MOUSE5.192e-2031.58Tyrosine-protein kinase BTK OS=Mus musculus GN=Btk... [more]
TEC_MOUSE8.856e-2036.75Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec... [more]
SRK1_SPOLA8.856e-2035.66Tyrosine-protein kinase isoform SRK1 OS=Spongilla ... [more]
RMIL_AVII18.856e-2037.32Serine/threonine-protein kinase-transforming prote... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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