DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M3K7_BOVIN (Mitogen-activated protein kinase kinase kinase 7 OS=Bos taurus GN=MAP3K7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  108 VNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL-----LLRVAIDVSKGMNYLHR---NNIIHRDLKAANLLMNENG 560
            +  P++ ++  EID   ++ E  +  G++  + K  + ++DVAIK + +E    + R+ F  E+  + +V H N+V+  GAC  P  + +V E+  GGS+Y+ LH  +    LP       +   +  S+G+ YLH      +IHRDLK  NLL+   G
Sbjct:   19 IEAPSQVLNFEEIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 168          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: IKKA_XENLA (Inhibitor of nuclear factor kappa-B kinase subunit alpha OS=Xenopus laevis GN=chuk PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 3
Query:  186 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL-FIVT-------EFMSGGSIYDYLHKQK--CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            G+ C LY+     +  AIK    E L+   +  + QE+ IM+++ H NVV+   AC  PP + F+V        E+ +GG +   L+K +  CGLK   +L +  D+  G+ YLH N IIHRDLK  N+++ E
Sbjct:   27 GNVC-LYQNRETGELKAIKSCRLE-LSVKNKERWCQEIQIMKRLNHPNVVK---ACDVPPEMDFLVNDVPHLAMEYCAGGDLRKLLNKPENCCGLKESQVLNLISDIGSGIQYLHENRIIHRDLKPENIVLQE 154          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 52/161 (32.30%), Postives = 92/161 (57.14%), Query Frame = 3
Query:  159 LKFEHKIVSGSYCDLYKGAFFS-QDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGSIYDYLHKQKCGL--KLPLL-----LRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            L  E  I SG    +YK    + + VA+K +L  + L  N  + F++EV  + ++RH ++V+ +G C+        ++ E+M  GSI+D+LH+ K  L  K  LL     LR+A+ +++G+ YLH +    I+HRD+K++N+L+      DS++  +L +F
Sbjct:  951 LSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSN--KSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLL------DSNMEAHLGDF 1103          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHB3_MOUSE (Ephrin type-B receptor 3 OS=Mus musculus GN=Ephb3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            EID S +K E  I +G + ++ +G           VAIK L   +  E  RR+F  E  IM +  H N+++  G  T+   + I+TEFM   ++  +L        +  L+ +   ++ GM YL   N +HRDL A N+L+N N V      C +S+F
Sbjct:  622 EIDVSCVKIEEVIGAGEFGEVCRGRLKLPGRREVFVAIKTLKVGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV------CKVSDF 772          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHB3_CHICK (Ephrin type-B receptor 3 (Fragment) OS=Gallus gallus GN=EPHB3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            EID S +K E  I +G + ++ +G           VAIK L   +  E  RR+F  E  IM +  H N++   G  T+   + I+TEFM   ++  +L        +  L+ +   ++ GM YL   N +HRDL A N+L+N N V      C +S+F
Sbjct:  617 EIDISCVKIEEVIGAGEFGEVCRGRLKLPGRREIFVAIKTLKVGY-TERQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENCALDSFLRLNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV------CKVSDF 767          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA5_RAT (Ephrin type-A receptor 5 OS=Rattus norvegicus GN=Epha5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 59/202 (29.21%), Postives = 93/202 (46.04%), Query Frame = 3
Query:   27 AKEIPKVENHH----HVVYPVGEQEQSGINHVNIPAEGIDVW--EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            AK+ P+ E  H    H+  P G +     +    P + +  +  EI+AS +  E  I +G + ++  G           VA K L   +  E  RR+F  E  IM +  H N++   G  T+   + IVTE+M  GS+  +L K      +  L+ +   ++ GM YL     +HRDL A N+L+N N V      C +S+F
Sbjct:  628 AKQDPEEEKMHFHNGHIKLP-GVRTYIDPHTYEDPTQAVHEFGKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVATKTLKVGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 821          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            E+DA+ +  +  + +G + ++  G           VAIK L   +  E  RR+F  E  IM +  H N+++  G  T+   + IVTE+M  GS+  +L K      +  L+ +   ++ GM YL     +HRDL A N+L+N N V      C +S+F
Sbjct:  616 ELDATNIAIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 766          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: STK25_MOUSE (Serine/threonine-protein kinase 25 OS=Mus musculus GN=Stk25 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.159e-11
Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            +I  GS+ ++YKG      + VAIK++  E   + I  +  QE+ ++ +     + ++ G+  +  +L+I+ E++ GGS  D L      L+   +  +  ++ KG++YLH    IHRD+KAAN+L++E G
Sbjct:   25 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG 152          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: STK25_HUMAN (Serine/threonine-protein kinase 25 OS=Homo sapiens GN=STK25 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.159e-11
Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            +I  GS+ ++YKG      + VAIK++  E   + I  +  QE+ ++ +     + ++ G+  +  +L+I+ E++ GGS  D L      L+   +  +  ++ KG++YLH    IHRD+KAAN+L++E G
Sbjct:   25 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG 152          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ROS_CHICK (Proto-oncogene tyrosine-protein kinase ROS OS=Gallus gallus GN=ROS1 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.159e-11
Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 3
Query:  171 HKIV-SGSYCDLYKGAFFS--------QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL---HKQKCG---LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            HK++ SG++ ++Y+G              VA+K L     ++  + EF +E H+M K  H ++++ +G C      +++ E M GG +  YL    KQK     L L  LL + +D+ KG  YL +   IHRDL A N L++E
Sbjct: 1964 HKLLGSGAFGEVYEGTALDILADGSGESRVAVKTLKRGATDQE-KSEFLKEAHLMSKFDHPHILKLLGVCLLNEPQYLILELMEGGDLLSYLRGARKQKFQSPLLTLTDLLDICLDICKGCVYLEKMRFIHRDLAARNCLVSE 2105          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
M3K7_BOVIN8.877e-1230.82Mitogen-activated protein kinase kinase kinase 7 O... [more]
IKKA_XENLA8.877e-1236.09Inhibitor of nuclear factor kappa-B kinase subunit... [more]
GSO1_ARATH8.877e-1232.30LRR receptor-like serine/threonine-protein kinase ... [more]
EPHB3_MOUSE8.877e-1231.65Ephrin type-B receptor 3 OS=Mus musculus GN=Ephb3 ... [more]
EPHB3_CHICK8.877e-1231.65Ephrin type-B receptor 3 (Fragment) OS=Gallus gall... [more]
EPHA5_RAT8.877e-1229.21Ephrin type-A receptor 5 OS=Rattus norvegicus GN=E... [more]
EPHA3_RAT8.877e-1230.38Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
STK25_MOUSE1.159e-1130.53Serine/threonine-protein kinase 25 OS=Mus musculus... [more]
STK25_HUMAN1.159e-1130.53Serine/threonine-protein kinase 25 OS=Homo sapiens... [more]
ROS_CHICK1.159e-1132.17Proto-oncogene tyrosine-protein kinase ROS OS=Gall... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
back to top