DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MP2K1_DICDI (Dual specificity mitogen-activated protein kinase kinase 1 OS=Dictyostelium discoideum GN=mekA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.978e-11
Identity = 40/111 (36.04%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN-NIIHRDLKAANLLMNENG 560
            +A+KV+T + + ENIR++   E+  + K  +  +V F  A      +FI  EFM  GS+ D + K+   +  P+L ++A  V +G+ YLHR  ++IHRD+K +N+L+N  G
Sbjct:  318 IALKVITLD-IQENIRKQIILELKTLHKTSYPYIVSFYDAFYTEGSIFIALEFMELGSLSDIM-KKTSTIPEPVLGKIAFQVLQGLVYLHRKLHLIHRDIKPSNILVNNKG 426          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA3_MOUSE (Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.978e-11
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            E+DA+ +  +  + +G + ++  G           VAIK L   +  E  RR+F  E  IM +  H N+++  G  T+     IVTE+M  GS+  +L K      +  L+ +   ++ GM YL     +HRDL A N+L+N N V      C +S+F
Sbjct:  615 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPEMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 765          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA2_MACFA (Ephrin type-A receptor 2 OS=Macaca fascicularis GN=EPHA2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.978e-11
Identity = 48/159 (30.19%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            EI  S +  +  I +G + ++YKG   +        VAIK L   +  E  R +F  E  IM +  H N+++  G  ++   + I+TEFM  G++  +L ++     +  L+ +   ++ GM YL   N +HRDL A N+L+N N V      C +S+F
Sbjct:  607 EIHPSCVTRQKVIGAGEFGEVYKGTLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEFMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV------CKVSDF 758          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DDR1_RAT (Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.978e-11
Identity = 37/127 (29.13%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKL------------------PLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            VA+K+L  +   +N R +F +EV IM +++ +N+++ +G C +   L ++T++M  G +  +L   +   K+                  P+LL V   ++ GM YL   N +HRDL   N L+ EN
Sbjct:  649 VAVKILRPD-ATKNARNDFLKEVKIMSRLKDLNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLENKVTQGLPGDRESDQGPTISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGEN 774          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y9877_DICDI (Serine/threonine-protein kinase DDB_G0283821 OS=Dictyostelium discoideum GN=DDB_G0283821 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  234 AIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            AIK +    ++E       QE+ +++ ++H N+V+FI +      L+   EF+ GGS+     +  C  + PLL R    V KG+ YLH   +IHRD+K+ N+L+ + GV
Sbjct:   40 AIKQIEKTIISEKQLPSIIQEIKLLQTLQHPNIVKFIESYETSRYLYFALEFIEGGSLAKIAKRYGC-FQEPLLSRYFSQVLKGLAYLHEKGVIHRDIKSDNILITKEGV 148          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 45/149 (30.20%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  123 EGIDVWEIDASLLKFEH--KIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMN 551
            +G +  E+D++   F    +I  G Y  +YKG      + + V   E  +   ++EF  E+ ++ ++ H N+V  +G C +     +V E+M  GS+ D L  + +  L L L LR+A+  ++G+ YLH      IIHRD+K +N+L++
Sbjct:  617 KGYNFTELDSATSSFSDLSQIGRGGYGKVYKG-HLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLD 764          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 38/137 (27.74%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  165 FEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNEN 557
            F+  +  G +  +Y G+   ++ VA+K+L+  H +    ++F  EV ++ +V H N+V  +G C    +L ++ E+M+ G + +++  ++ G  L     L++A++ ++G+ YLH   +  ++HRD+K  N+L+NE+
Sbjct:  579 FQKILGKGGFGIVYYGSVNGTEQVAVKMLS--HSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEH 713          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 41/137 (29.93%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  165 FEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNEN 557
            FE  +  G +  +Y G    ++ VA+KVL+         ++F  EV ++ +V H+N+V  +G C     L ++ E+MS G++  +L     +  L     LR+A + ++G+ YLH   +  +IHRD+K+ N+L++ N
Sbjct:  593 FERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGY--KQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNN 727          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  171 HKIVS-GSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP-----RLFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNE 554
            H I+  G Y +++KGA      VA K   N     +    FA EV ++  +RH+N++   G CT        +  IV + +S GS++D+L    +  L  PL  R+A+ +++G+ YLH   + +IIHRD+KA+N+L++E
Sbjct:  286 HNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDAN--FAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDE 422          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PTK6_MOUSE (Protein-tyrosine kinase 6 OS=Mus musculus GN=Ptk6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 45/155 (29.03%), Postives = 78/155 (50.32%), Query Frame = 3
Query:  105 HVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            H   P    D WE          K+ +G + ++++  +  Q  VA+KV++ ++L    +  F  E+  M+K+RH +++      T    ++I+TE M  G++   L    +  L +  L+  A  V++GM YL   N IHRDL A N+L+ EN +
Sbjct:  173 HKTEPLPHWDDWERPREEFTLCKKLGAGYFGEVFEALWKGQVHVAVKVISRDNLLH--QHTFQAEIQAMKKLRHKHILSLYAVATAGDPVYIITELMPKGNLLQLLRDSDEKALPILELVDFASQVAEGMCYLESQNYIHRDLAARNVLVTENNL 325          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
MP2K1_DICDI1.978e-1136.04Dual specificity mitogen-activated protein kinase ... [more]
EPHA3_MOUSE1.978e-1130.38Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 ... [more]
EPHA2_MACFA1.978e-1130.19Ephrin type-A receptor 2 OS=Macaca fascicularis GN... [more]
DDR1_RAT1.978e-1129.13Epithelial discoidin domain-containing receptor 1 ... [more]
Y9877_DICDI2.583e-1133.64Serine/threonine-protein kinase DDB_G0283821 OS=Di... [more]
Y5374_ARATH2.583e-1130.20Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH2.583e-1127.74Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH2.583e-1129.93Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH2.583e-1133.81Probable LRR receptor-like serine/threonine-protei... [more]
PTK6_MOUSE2.583e-1129.03Protein-tyrosine kinase 6 OS=Mus musculus GN=Ptk6 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
back to top