DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PAKF_DICDI (Serine/threonine-protein kinase pakF OS=Dictyostelium discoideum GN=pakF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  168 EHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            + K+  G+Y  +YKG        +AIKV+    + E+       E++I++  +  N+V + G+      ++I+ +F + GSI D +   +  L    +  V  +  KG+ YLH  NIIHRD+KAAN+L++E
Sbjct:  397 DEKLGDGAYGSVYKGTHKDLGFTLAIKVI---EMKESESVSLQNEINILKNCKSPNIVSYFGSLQTESHIWILLDFCALGSIRDIIESTEKTLNEAQISFVVKNTLKGLIYLHSQNIIHRDVKAANVLLSE 524          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M4K3_RAT (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Rattus norvegicus GN=Map4k3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFA---QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            +I SG+Y D+YK    +     AIKV+  E        +FA   QE+ +M+  +H N+V + G+  R  +L+I  EF  GGS+ D  H      +L +   V+ +  +G+ YLH    +HRD+K AN+L+ +NG
Sbjct:   21 RIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----GEDFAVVQQEIIMMKDCKHANIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSELQIAY-VSRETLQGLYYLHSKGKMHRDIKGANILLTDNG 148          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA2_MOUSE (Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.583e-11
Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            EI  S +  +  I +G + ++YKG   +        VAIK L   +  E  R +F  E  IM +  H N++   G  ++   + I+TE+M  G++  +L ++     +  L+ +   ++ GM YL   N +HRDL A N+L+N N V      C +S+F
Sbjct:  608 EIHPSCVARQKVIGAGEFGEVYKGTLKASSGKKEIPVAIKTLKAGY-TEKQRVDFLSEASIMGQFSHHNIIPLEGVVSKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIASGMKYLANMNYVHRDLAARNILVNSNLV------CKVSDF 759          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 42/137 (30.66%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  165 FEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ--KCGLKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNEN 557
            F+  +  G +  +Y G    S+ VA+KVL+      +  +EF  EV ++ +V H N+V  +G C     L +V EF+  G +  +L  +     +   + LR+A++ + G+ YLH      ++HRD+K AN+L++EN
Sbjct:  566 FQRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGS--KEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDEN 700          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M4K3_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFA---QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            +I SG+Y D+YK    +     AIKV+  E        +FA   QE+ +M+  +H N+V + G+  R  +L+I  EF  GGS+ D  H      +L +   V+ +  +G+ YLH    +HRD+K AN+L+ +NG
Sbjct:   21 RIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----GEDFAVVQQEIIMMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSELQIAY-VSRETLQGLYYLHSKGKMHRDIKGANILLTDNG 148          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M4K3_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Homo sapiens GN=MAP4K3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFA---QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            +I SG+Y D+YK    +     AIKV+  E        +FA   QE+ +M+  +H N+V + G+  R  +L+I  EF  GGS+ D  H      +L +   V+ +  +G+ YLH    +HRD+K AN+L+ +NG
Sbjct:   21 RIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----GEDFAVVQQEIIMMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSELQIAY-VSRETLQGLYYLHSKGKMHRDIKGANILLTDNG 148          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M3KL4_MOUSE (Mitogen-activated protein kinase kinase kinase OS=Mus musculus GN=Mlk4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 45/157 (28.66%), Postives = 77/157 (49.04%), Query Frame = 3
Query:  144 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLN------ENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP-----------LLLRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMNE 554
            +D   L+ +  I +G +  +Y+  +  Q+VA+K    +         E++RRE      +   +RH N++Q  G C R P L +V EF  GG++   L       + P           +L+  A+ +++GM YLH      I+HRDLK++N+L+ E
Sbjct:  105 VDFERLELKELIGAGGFGQVYRATWQGQEVAVKAARRDPEQDAAAAAESVRRE----ARLFAMLRHPNIIQLRGVCLRQPHLCLVLEFARGGALNRALAAAASDPRAPGPRRARRIPPQVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLE 257          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: JAK1_CYPCA (Tyrosine-protein kinase JAK1 OS=Cyprinus carpio GN=jak1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP--RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDSD 575
            VA+K L  E+  E     + +E+HI+R++ H N+V++ G         + ++ EF+  GS+ +YL + K  + L  LL  A+ + +GM+ L   N IHRDL A N+L+ NEN V+  D
Sbjct:  905 VAVKSLKPENREEQSSNLW-REIHILRELYHENIVKYKGIWHEEGGRSIKLIMEFLPAGSLKEYLPRNKAHIDLKTLLNYAVQICQGMDLLASRNYIHRDLAARNVLVENENTVKIGD 1021          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DDR1_PANTR (Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 38/127 (29.92%), Postives = 64/127 (50.39%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------------------KQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            VA+K+L  +   +N R +F +EV IM +++  N+++ +G C +   L ++T++M  G +  +L                    Q   +  P+LL VA  ++ GM YL   N +HRDL   N L+ EN
Sbjct:  648 VAVKILRPD-ATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGEN 773          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DDR1_HUMAN (Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 38/127 (29.92%), Postives = 64/127 (50.39%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------------------KQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            VA+K+L  +   +N R +F +EV IM +++  N+++ +G C +   L ++T++M  G +  +L                    Q   +  P+LL VA  ++ GM YL   N +HRDL   N L+ EN
Sbjct:  652 VAVKILRPD-ATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGEN 777          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
PAKF_DICDI2.583e-1131.30Serine/threonine-protein kinase pakF OS=Dictyostel... [more]
M4K3_RAT2.583e-1134.33Mitogen-activated protein kinase kinase kinase kin... [more]
EPHA2_MOUSE2.583e-1129.56Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 ... [more]
RLK7_ARATH3.373e-1130.66Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
M4K3_MOUSE3.373e-1134.33Mitogen-activated protein kinase kinase kinase kin... [more]
M4K3_HUMAN3.373e-1134.33Mitogen-activated protein kinase kinase kinase kin... [more]
M3KL4_MOUSE3.373e-1128.66Mitogen-activated protein kinase kinase kinase OS=... [more]
JAK1_CYPCA3.373e-1135.59Tyrosine-protein kinase JAK1 OS=Cyprinus carpio GN... [more]
DDR1_PANTR3.373e-1129.92Epithelial discoidin domain-containing receptor 1 ... [more]
DDR1_HUMAN3.373e-1129.92Epithelial discoidin domain-containing receptor 1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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