DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 48/161 (29.81%), Postives = 86/161 (53.42%), Query Frame = 3
Query:   87 EQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAI--DVSKGMNYLHRNN---IIHRDLKAANLLMN 551
            +QSGI  ++         E+        +K+  G + ++YKG   +  +VA+K L+    +E   +EF  EV ++ K++H N+V+ +G C  P    +V EF+   S+  +L       +L    R  I   +++G+ YLH+++   IIHRDLKA+N+L++
Sbjct:  343 DQSGITTLHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKT--SEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLD 501          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 39/129 (30.23%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  186 GSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQKCG---LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            G +  +Y G     + VA+K L + +       +F  EV I+  +RH N+V   G  ++  R L +V E+++ G++ D+LH  +     L   + L++A++ +  + YLH + IIHRD+K+ N+L+++N
Sbjct:  353 GGFGTVYYGKLKDGRSVAVKRLYDNNFKR--AEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHASKIIHRDVKSNNILLDQN 479          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: STK24_HUMAN (Serine/threonine-protein kinase 24 OS=Homo sapiens GN=STK24 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 42/132 (31.82%), Postives = 76/132 (57.58%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            KI  GS+ +++KG      + VAIK++  E   + I  +  QE+ ++ +     V ++ G+  +  +L+I+ E++ GGS  D L        ++  +LR   ++ KG++YLH    IHRD+KAAN+L++E+G
Sbjct:   41 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHG 168          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 41/128 (32.03%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  231 VAIKVL-TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK--QKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            VA+K L  +  L ++ R +  +E  I+ K R   ++  +G C  P  L IVTE+M  GS+ + LH+  +   +  PL  R+  +++ G+NYLH  N  ++H DLK  N+L+      D++ H  +++F
Sbjct:   44 VAVKHLHIHTPLLDSERNDILREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDIAWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILL------DNEFHVKIADF 165          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PHG2_DICDI (Serine/threonine-protein kinase phg2 OS=Dictyostelium discoideum GN=phg2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 38/140 (27.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  144 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNEN 557
            I ++ L++  +I SG+Y  +YKG +  + VAIK +   ++       F +E  I+  ++   ++ F G+C    +L +V E+ S G+++  L+            +   +V +G+ YLH  N  ++HRDLK  N+L++ +
Sbjct:  802 IPSADLEYIKRIGSGTYSKVYKGKYRDKFVAIKTMRGSNMTTEQIESFKKECDILSTIQSPLLISFYGSCIEESQLSMVVEYCSKGTLHKVLNNPLLDFDWDKWFKWMTEVVEGVRYLHSMNPPMVHRDLKTLNILISSD 941          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MYLKB_DICDI (Probable myosin light chain kinase DDB_G0271550 OS=Dictyostelium discoideum GN=DDB_G0271550 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYD-------YLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 545
            VAIK ++ +H++E   + F +E+ IM+K++H N++Q I        L++V E + GG ++D       Y  K  C L           +   + Y+H++ + HRDLK  NLL
Sbjct:   46 VAIKAISKQHVSEADMKRFTREIEIMKKLKHKNIIQLIEVFDSNDYLYLVLELIRGGELFDKIVEKGNYSEKDACNL--------VRQIVSAVEYMHQHGVCHRDLKPENLL 149          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MST4_MOUSE (Serine/threonine-protein kinase MST4 OS=Mus musculus GN=Mst4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 45/154 (29.22%), Postives = 84/154 (54.55%), Query Frame = 3
Query:  108 VNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            V +P    ++ + +    K E +I  GS+ +++KG      Q VAIK++  E   + I  +  QE+ ++ +     V ++ G+  +  +L+I+ E++ GGS  D L        ++  +L+   ++ KG++YLH    IHRD+KAAN+L++E G
Sbjct:    8 VQVPGMQNNIADPEELFTKLE-RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQG 156          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MST4_HUMAN (Serine/threonine-protein kinase MST4 OS=Homo sapiens GN=MST4 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 45/154 (29.22%), Postives = 84/154 (54.55%), Query Frame = 3
Query:  108 VNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            V +P    ++ + +    K E +I  GS+ +++KG      Q VAIK++  E   + I  +  QE+ ++ +     V ++ G+  +  +L+I+ E++ GGS  D L        ++  +L+   ++ KG++YLH    IHRD+KAAN+L++E G
Sbjct:    8 VQVPGMQNNIADPEELFTKLE-RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQG 156          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: JAK_DROME (Tyrosine-protein kinase hopscotch OS=Drosophila melanogaster GN=hop PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 3
Query:  156 LLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRD 569
            +   E+ I  G Y  +YKG     D       VAIK+L    ++     +F +E+ IMR + H N+V+F     +     I+ E++  GS   YL      L  P L+  A+D++ GM YL    +IHRDL A N+L++ NG  D
Sbjct:  891 IYNMENMIGRGHYGTVYKGHLEFNDKDQPREQVAIKMLNTMQVST----DFHREIGIMRTLSHPNIVKFKYWAEKSH--CIIMEYLQSGSFDIYLRFTAPNLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARNILVDHNGDGD 1029          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: IKKA_XENTR (Inhibitor of nuclear factor kappa-B kinase subunit alpha OS=Xenopus tropicalis GN=chuk PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 3
Query:  186 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL-FIVT-------EFMSGGSIYDYLHKQK--CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            G+ C LY+     +  AIK    E   +N  R + QE+ IM+++ H NVV+   AC  PP + F+V        E+ +GG +   L+K +  CGLK   +L +  D+  G+ YLH   IIHRDLK  N+++ E
Sbjct:   27 GNVC-LYQNRETGELKAIKSCRLELSMKNKER-WCQEIQIMKRLNHPNVVK---ACEVPPEMDFLVNDVPHLAMEYCAGGDLRKLLNKPENCCGLKESQVLNLMSDIGSGIQYLHEKRIIHRDLKPENIVLQE 154          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
CRK12_ARATH3.373e-1129.81Putative cysteine-rich receptor-like protein kinas... [more]
Y1839_ARATH4.405e-1130.23Probable serine/threonine-protein kinase At1g18390... [more]
STK24_HUMAN4.405e-1131.82Serine/threonine-protein kinase 24 OS=Homo sapiens... [more]
RIPK2_MOUSE4.405e-1132.03Receptor-interacting serine/threonine-protein kina... [more]
PHG2_DICDI4.405e-1127.14Serine/threonine-protein kinase phg2 OS=Dictyostel... [more]
MYLKB_DICDI4.405e-1131.25Probable myosin light chain kinase DDB_G0271550 OS... [more]
MST4_MOUSE4.405e-1129.22Serine/threonine-protein kinase MST4 OS=Mus muscul... [more]
MST4_HUMAN4.405e-1129.22Serine/threonine-protein kinase MST4 OS=Homo sapie... [more]
JAK_DROME4.405e-1133.10Tyrosine-protein kinase hopscotch OS=Drosophila me... [more]
IKKA_XENTR4.405e-1136.09Inhibitor of nuclear factor kappa-B kinase subunit... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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