DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.405e-11
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK-LPLLLR--VAIDVSKGMNYLHRN--NIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            +A+K L  E    +  RE+  E++ + ++ H N+V+ IG C       +V EFM  GS+ ++L ++    K LP  LR  VA+D +KG+ +LH +   +I+RD+KA+N+L+      D+D +  LS+F
Sbjct:  102 IAVKKLNQEGFQGH--REWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILL------DADYNAKLSDF 221          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 39/136 (28.68%), Postives = 75/136 (55.15%), Query Frame = 3
Query:  165 FEHKIVSGSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNEN 557
            F H +  G +  +Y+G   + + VA+KVL +   N +   +F  EV  M +  H+N+V  +G C    +  I++EF+  GS+  ++ + K     +  L  +A+ +++G+ YLH   +  I+H D+K  N+L+++N
Sbjct:  498 FSHTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNGD---DFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDN 630          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  282 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ--KCGLKLPLLLRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMNEN 557
            +F  EV ++ ++ H NVV+ +G C       +V EF++ G+++D+LH       L     LR+AI+V+  + YLH +    IIHRD+K AN+L++EN
Sbjct:  455 QFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDEN 551          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNIK_MOUSE (Traf2 and NCK-interacting protein kinase OS=Mus musculus GN=Tnik PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = 3
Query:  117 PAEGIDVWEIDASLLK-----FE--HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTR--PP----RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            PA  +D  EID S L+     FE    + +G+Y  +YKG      Q  AIKV+    +  +   E  QE+++++K   H N+  + GA  +  PP    +L++V EF   GS+ D +   K   LK   +  +  ++ +G+++LH++ +IHRD+K  N+L+ EN
Sbjct:    6 PARSLD--EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 164          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNIK_HUMAN (TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = 3
Query:  117 PAEGIDVWEIDASLLK-----FE--HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTR--PP----RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            PA  +D  EID S L+     FE    + +G+Y  +YKG      Q  AIKV+    +  +   E  QE+++++K   H N+  + GA  +  PP    +L++V EF   GS+ D +   K   LK   +  +  ++ +G+++LH++ +IHRD+K  N+L+ EN
Sbjct:    6 PARSLD--EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 164          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 3
Query:  186 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNEN 557
            G +  +YKG        + V      +E    EF  E+ ++ K+RH ++V  IG C     + +V E+M+ G +  +L+    G  LP L     L + I  ++G++YLH     +IIHRD+K  N+L++EN
Sbjct:  519 GGFGRVYKGTL-EDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLY----GADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDEN 645          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 41/128 (32.03%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  231 VAIKVL-TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK--QKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            VA+K L  +  L ++ R +  +E  I+ K R   ++  +G C  P  L IVTE+M  GS+ + LH+  +   +  PL  R+  +++ G+NYLH  N  ++H DLK  N+L+      D++ H  +++F
Sbjct:   44 VAVKHLHIHSPLLDSERNDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKIEYPDVPWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILL------DNEFHVKIADF 165          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  186 GSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH---KQKCGLKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            G +  +YKG   S  Q VA+K L    L  N  REF  EV ++  + H N+V  IG C    +  +V EFM  GS+ D+LH     K  L   + +++A   +KG+ +LH      +I+RD K++N+L++E        H  LS+F
Sbjct:   95 GGFGRVYKGRLDSTGQVVAVKQLDRNGLQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEG------FHPKLSDF 232          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 44/142 (30.99%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  186 GSYCDLYKGA-------FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV-AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDIHC 584
            G Y  +Y G        F  + + I  + ++   +N+   F++E+ +MR +RH N+V+++G       L +  E++ GGSI   L   K G     +++V    + +G+++LH N+IIHRD+K AN+L++  G V+ SD  C
Sbjct:  179 GGYGSVYLGLNKDTGELFAVKQLEIVDINSDPKLKNMILSFSKEIEVMRSLRHDNIVRYLGTSLDQSFLSVFLEYIPGGSISSLL--GKFGAFSENVIKVYTKQILQGLSFLHANSIIHRDIKGANILIDTKGIVKLSDFGC 318          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPHA2_HUMAN (Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            EI  S +  +  I +G + ++YKG   +        VAIK L   +  E  R +F  E  IM +  H N+++  G  ++   + I+TE+M  G++  +L ++     +  L+ +   ++ GM YL   N +HRDL A N+L+N N V      C +S+F
Sbjct:  607 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV------CKVSDF 758          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
BIK1_ARATH4.405e-1134.38Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5392_ARATH5.754e-1128.68Probable receptor-like protein kinase At5g39020 OS... [more]
WAK3_ARATH5.754e-1137.11Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
TNIK_MOUSE5.754e-1131.71Traf2 and NCK-interacting protein kinase OS=Mus mu... [more]
TNIK_HUMAN5.754e-1131.71TRAF2 and NCK-interacting protein kinase OS=Homo s... [more]
THE1_ARATH5.754e-1131.06Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
RIPK2_BOVIN5.754e-1132.03Receptor-interacting serine/threonine-protein kina... [more]
PBS1_ARATH5.754e-1134.25Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
MKKA_DICDI5.754e-1130.99Mitogen-activated protein kinase kinase kinase A O... [more]
EPHA2_HUMAN5.754e-1129.56Ephrin type-A receptor 2 OS=Homo sapiens GN=EPHA2 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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