DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: DDR1_MOUSE (Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL------HKQKCGL------------KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            VA+K+L  +   +N R +F +EV IM +++  N+++ +G C +   L ++T++M  G +  +L      +K   GL              P+LL V   ++ GM YL   N +HRDL   N L+ EN
Sbjct:  650 VAVKILRPD-ATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSARQLENKATQGLSGDTESDQGPTISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGEN 775          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 36/129 (27.91%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  186 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKL---PLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNE 554
            G    +YKG      + + V  ++ ++E+   EF  EV I+ ++ H N+V+ +G C       +V EF+  G+++++LH       +    + LR+A+D++  ++YLH    + I HRD+K+ N++++E
Sbjct:  442 GGQGTVYKGMLVDGRI-VAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDE 569          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TYRO3_DANRE (Tyrosine-protein kinase receptor TYRO3 OS=Danio rerio GN=tyro3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = 3
Query:  225 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG------ACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-----LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            Q VA+KVL  +  + +   +  +E   M+   H NV+Q IG      A  R P   ++  FM  G ++ +L   + G     +   +L++  +D+++GM YL   NIIHRDL A N ++NEN
Sbjct:  524 QKVAVKVLKTDINSSSDIEQCLKEAAYMKDFHHPNVIQLIGVSLHRRAQQRLPIPMVILPFMKHGDLHTFLLMSRLGDEPFTVSQQILIQFMLDIARGMEYLSNKNIIHRDLAARNCMLNEN 645          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 40/141 (28.37%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  159 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL--HKQKCGLKLPLL--LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            ++F  ++  G++  +YKG     +     VAIK L  E+ +   +++F +E+ ++  ++H N+V  +G         ++ E+M+ G ++++L  +    G  L  L  L++A+ +S+GM YL  ++ +HRDL A N L+NE
Sbjct:  410 VEFLEELGEGAFGKVYKGQLLQPNKTTITVAIKAL-KENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAHHYVHRDLAARNCLVNE 549          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = 3
Query:  234 AIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG---LKLPLLLRVAIDVSKGMNYLHRN---NIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            ++K   +E+ ++++ R+ FA EV  +  +RH ++V+    C+      +V E+M  GS+ D LH  + G   L  P  LR+A+D ++G++YLH +    I+HRD+K++N+L+      DSD    +++F
Sbjct:  716 SVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILL------DSDYGAKVADF 838          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MINK1_MOUSE (Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 52/164 (31.71%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  117 PAEGIDVWEIDASLLK-----FE--HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTR--PP----RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            PA  +D  +ID S L+     FE    + +G+Y  +YKG      Q  AIKV+    + E+   E  QE+++++K   H N+  + GA  +  PP    +L++V EF   GS+ D +   K   LK   +  +  ++ +G+ +LH + +IHRD+K  N+L+ EN
Sbjct:    6 PARSLD--DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTEDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 164          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MINK1_HUMAN (Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 52/164 (31.71%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  117 PAEGIDVWEIDASLLK-----FE--HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTR--PP----RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            PA  +D  +ID S L+     FE    + +G+Y  +YKG      Q  AIKV+    + E+   E  QE+++++K   H N+  + GA  +  PP    +L++V EF   GS+ D +   K   LK   +  +  ++ +G+ +LH + +IHRD+K  N+L+ EN
Sbjct:    6 PARSLD--DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTEDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDCIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 164          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: LIMK2_MOUSE (LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  195 CDLYKG-----AFFSQDVAI------KVLTNEHL---NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 548
            CDL  G      FF Q + +      KV+  + L   +E  ++ F  EV +MR + H NV++FIG   +  +L ++TE++ GG++ D+L +          +R A  +S GM YLH   IIHRDL + N L+
Sbjct:  329 CDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFL-RSVDPFPWQQKVRFAKGISSGMAYLHSMCIIHRDLNSHNCLI 459          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: JAK1_MOUSE (Tyrosine-protein kinase JAK1 OS=Mus musculus GN=Jak1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  225 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDSD 575
            + VA+K L  E    +I  +  +E+ I+R + H N+V++ G C       + ++ EF+  GS+ +YL K K  + L   L+ AI + KGM+YL     +HRDL A N+L+ +E+ V+  D
Sbjct:  902 EQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICMEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAIQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 1020          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: GDT8_DICDI (Probable serine/threonine-protein kinase gdt8 OS=Dictyostelium discoideum GN=gdt8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 42/138 (30.43%), Postives = 72/138 (52.17%), Query Frame = 3
Query:  141 EIDASLLKFEHKIVS--GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 548
            ++D   +K E  I S   S   ++KG +    VA+K       +++  +    EV I+ KV ++NVV++IG+      + IVTE+   GS+   +H  K  L     ++  +D +KG  +LH + I+H D+K  NLL+
Sbjct: 1030 KLDYKEIKTEQLIASYLPSKVYVFKGYYRDLAVAVKKFAISDNSKSFEK-IKNEVQILSKVNNINVVRYIGSAQNISHVCIVTEYAKEGSLGSLIHDSKIKLSFIQKVKFMLDAAKGFTFLHASEIVHGDIKPDNLLV 1166          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
DDR1_MOUSE5.754e-1130.71Epithelial discoidin domain-containing receptor 1 ... [more]
WAKLJ_ARATH7.514e-1127.91Wall-associated receptor kinase-like 10 OS=Arabido... [more]
TYRO3_DANRE7.514e-1132.79Tyrosine-protein kinase receptor TYRO3 OS=Danio re... [more]
ROR1_DROME7.514e-1128.37Tyrosine-protein kinase transmembrane receptor Ror... [more]
RLK5_ARATH7.514e-1131.78Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
MINK1_MOUSE7.514e-1131.71Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 P... [more]
MINK1_HUMAN7.514e-1131.71Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 P... [more]
LIMK2_MOUSE7.514e-1134.09LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 ... [more]
JAK1_MOUSE7.514e-1134.17Tyrosine-protein kinase JAK1 OS=Mus musculus GN=Ja... [more]
GDT8_DICDI7.514e-1130.43Probable serine/threonine-protein kinase gdt8 OS=D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
back to top