DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 43/136 (31.62%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  168 EHKIVSGSYCDLYKGAF-FSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAI--DVSKGMNYLH---RNNIIHRDLKAANLLMNE 554
            E+++  G +  +YKG F   Q++A+K L+ N    +N   EF  E+ ++ K++H N+V+ IG C +     +V EF+   S+  ++   +    L  ++R  +   +++G+ YLH   R  IIHRDLKA+N+L+++
Sbjct:  360 ENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDN---EFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQ 492          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 38/130 (29.23%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  186 GSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG---LKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNE 554
            G    +YKG     + VA+K   ++ ++E+  +EF  EV I+ ++ H +VV+ +G C       +V EF+  G+++ ++H+++     +   + LR+A+D++  ++YLH    + I HRD+K+ N+L++E
Sbjct:  462 GGQGTVYKGMLVDGRTVAVK--KSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDE 589          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 38/130 (29.23%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  186 GSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG---LKLPLLLRVAIDVSKGMNYLH---RNNIIHRDLKAANLLMNE 554
            G    +YKG     + VA+K   ++ ++E+  +EF  EV I+ ++ H +VV+ +G C       +V EF+  G+++ ++H+++     +   + LR+A+D++  ++YLH    + I HRD+K+ N+L++E
Sbjct:  453 GGQGTVYKGMLVDGRTVAVK--KSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDE 580          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TESK2_HUMAN (Dual specificity testis-specific protein kinase 2 OS=Homo sapiens GN=TESK2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 3
Query:  174 KIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV--AIDVSKGMNYLHRNNIIHRDLKAANLLM--NENG 560
            KI SG + +++K    +  Q +A+K+ T   L+ N R    +EV +M ++ H N+++F+G C    +L  +TE+++ G++   L      L LP  +RV  A D++ G++YLH   I HRDL + N L+  +ENG
Sbjct:   63 KIGSGFFSEVFKVRHRASGQVMALKMNT---LSSN-RANMLKEVQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLLDS---NLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDLTSKNCLIKRDENG 190          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SNRK_RAT (SNF-related serine/threonine-protein kinase OS=Rattus norvegicus GN=Snrk PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  135 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            ++++D +L +    +V      L +  F  + VA+KV+    L+        QEV  M+ V+H N+V+         +L+++ E   GG ++DY+ K + GL   L  +    +   ++Y H+ +++HRDLK  N++  E
Sbjct:   15 LYDLDKTLGRGHFAVVK-----LARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFE 149          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SNRK_MOUSE (SNF-related serine/threonine-protein kinase OS=Mus musculus GN=Snrk PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  135 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            ++++D +L +    +V      L +  F  + VA+KV+    L+        QEV  M+ V+H N+V+         +L+++ E   GG ++DY+ K + GL   L  +    +   ++Y H+ +++HRDLK  N++  E
Sbjct:   15 LYDLDKTLGRGHFAVVK-----LARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFE 149          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SNRK_HUMAN (SNF-related serine/threonine-protein kinase OS=Homo sapiens GN=SNRK PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 3
Query:  135 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            ++++D +L +    +V      L +  F  + VA+KV+    L+        QEV  M+ V+H N+V+         +L+++ E   GG ++DY+ K + GL   L  +    +   ++Y H+ +++HRDLK  N++  E
Sbjct:   15 LYDLDKTLGRGHFAVVK-----LARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFE 149          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 40/147 (27.21%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  225 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL--------------HKQKCGLKLPLLLRVAID--------VSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            ++VAIK++    LN    ++  +EV IM+ + H N+V+          L+++ E+ SGG ++DYL               +Q C     + ++V+ D        +   + Y H+  I+HRDLKA NLL+      D+D++  +++F
Sbjct:   80 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQGCQAGQTIKVQVSFDLLSLMFTFIVSAVQYCHQKRIVHRDLKAENLLL------DADMNIKIADF 220          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 3
Query:  207 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            K    +   A K  T  H+     RE  +EV +++ + H N+V+++G       L I+ EF+ GGSI   L K       P+++     +  G+ YLH N I+HRD+K AN+L++  G
Sbjct:   97 KQVLIAPSSASKEKTQGHI-----RELEEEVQLLKNLSHPNIVRYLGTVRESDSLNILMEFVPGGSISSLLEKFG-SFPEPVIIMYTKQLLLGLEYLHNNGIMHRDIKGANILVDNKG 208          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: LIMK2_HUMAN (LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 3
Query:  195 CDLYKG-----AFFSQDVAI------KVLTNEHL---NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 548
            CDL  G      FF Q + +      KV+  + L   +E  ++ F  EV +MR + H NV++FIG   +  +L ++TE++ GG++ D+L            +R A  ++ GM YLH   IIHRDL + N L+
Sbjct:  329 CDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMD-PFPWQQKVRFAKGIASGMAYLHSMCIIHRDLNSHNCLI 459          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
CRK29_ARATH7.514e-1131.62Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
WAKLN_ARATH9.814e-1129.23Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLM_ARATH9.814e-1129.23Wall-associated receptor kinase-like 17 OS=Arabido... [more]
TESK2_HUMAN9.814e-1134.07Dual specificity testis-specific protein kinase 2 ... [more]
SNRK_RAT9.814e-1126.43SNF-related serine/threonine-protein kinase OS=Rat... [more]
SNRK_MOUSE9.814e-1126.43SNF-related serine/threonine-protein kinase OS=Mus... [more]
SNRK_HUMAN9.814e-1126.43SNF-related serine/threonine-protein kinase OS=Hom... [more]
MARK3_HUMAN9.814e-1127.21MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
M3K3_ARATH9.814e-1132.20Mitogen-activated protein kinase kinase kinase 3 O... [more]
LIMK2_HUMAN9.814e-1133.33LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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