DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:   74 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 213          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:  485 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 624          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:  448 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 587          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 627          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.856e-20
Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+P +L IVT++  G S+Y +LH  +   ++  L+ +A   ++GM+YLH  +IIHRDLK+ N+ ++E+
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED 627          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.157e-19
Identity = 53/144 (36.81%), Postives = 87/144 (60.42%), Query Frame = 3
Query:  144 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-----QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            ID + ++F  K+  G++ ++++G +    VAIK L      E  +  F +EV  ++K  H N+V FIGAC +P    I+TE+M+GGS+Y+ LH       K     PL+L++A D++ G+ +LH   I+HRDL + N+L++E G
Sbjct:  848 IDINDIQFIQKVGEGAFSEVWEGWWKGIHVAIKKLKIIGDEEQFKERFIREVQNLKKGNHQNIVMFIGACYKP--ACIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLHLHSITIVHRDLTSQNILLDELG 989          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: RAF1_XENLA (RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus laevis GN=raf1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.973e-19
Identity = 53/139 (38.13%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            WEI AS +    +I SGS+  +YKG +   DVA+K+L          + F  EV ++RK RH+N++ F+G  T+   L IVT++  G S+Y +LH      ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E
Sbjct:  333 WEIIASEVMLSSRIGSGSFGTVYKGKWHG-DVAVKILKVTDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYYHLHVLDTKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 469          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.973e-19
Identity = 60/175 (34.29%), Postives = 97/175 (55.43%), Query Frame = 3
Query:   36 IPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            IP++ +HH     V   ++SG+  +N P      W ++   +     +  G++ ++YKG    +  VAIK    E L + ++ +F QE  I+++  H N+V+ IG CT+   ++I+ E + GG    +L K+K  LKL  L+R ++DV+ GM YL   N IHRDL A N L+ EN
Sbjct:  525 IPQLIDHHFNTKQV-ITKKSGVVLLN-PIPKDKKWVLNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAIKTC-KEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLTFLRKRKDELKLKQLVRFSLDVAAGMLYLESKNCIHRDLAARNCLVGEN 696          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.973e-19
Identity = 58/177 (32.77%), Postives = 98/177 (55.37%), Query Frame = 3
Query:   36 IPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            IP++ +HH+    V   ++SG+  +N P      W +    +     +  G++ ++YKG    +  VA+K    E L + ++ +F QE  I+++  H N+V+ IG CT+   ++I+ E +SGG    +L ++K  LKL  L++ ++D + GM YL   N IHRDL A N L+ EN V
Sbjct:  524 IPQLIDHHYTTKQV-ITKKSGVVLLN-PIPKDKKWILSHEDVILGELLGKGNFGEVYKGTLKDKTSVAVKTC-KEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFLRRKKDELKLKQLVKFSLDAAAGMLYLESKNCIHRDLAARNCLVGENNV 697          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.577e-19
Identity = 56/174 (32.18%), Postives = 93/174 (53.45%), Query Frame = 3
Query:   36 IPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            IP++ +HH     V   ++SG+  +N P      W ++   +     +  G++ ++YKG    +         E L + ++ +F QE  I+++  H N+V+ IG CT+   ++I+ E + GG    +L K+K  LKL  L+R ++DV+ GM YL   N IHRDL A N L+ EN
Sbjct:   25 IPQLIDHHFNTKQV-ITKKSGVVLLN-PIPKDKKWVLNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGEN 196          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
RMIL_AVEVR8.856e-2037.32Serine/threonine-protein kinase-transforming prote... [more]
BRAF1_MOUSE8.856e-2037.32B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN8.856e-2037.32B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA8.856e-2037.32B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK8.856e-2037.32B-Raf proto-oncogene serine/threonine-protein kina... [more]
PYK2_DICDI1.157e-1936.81Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
RAF1_XENLA1.973e-1938.13RAF proto-oncogene serine/threonine-protein kinase... [more]
FER_MOUSE1.973e-1934.29Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
FER_HUMAN1.973e-1932.77Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
FER_RAT2.577e-1932.18Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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