DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14824 contig Ccv1_Contig14824:251..1572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 3 
Query:  231 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 599
            VAIK L   + ++  RR+F  E  IM +  H N+++  G  T+   + I+TE+M  GS+  +L K      +  L+ +   ++ GM YL   + +HRDL A N+L+N N V      C +S+F
Sbjct:   24 VAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGILRGIASGMKYLSDMSYVHRDLAARNILVNSNLV------CKVSDF 139
[Close]
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 41/134 (30.60%), Postives = 77/134 (57.46%), Query Frame = 3 
Query:  168 EHKIVSGSYCDLYKGAFFS-QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNN---IIHRDLKAANLLMN 551
            E+ +  G +  +YKG   + Q+VA+K LT      +I  EF  EV ++ +++H N+V+ +G C       +V EF+   S+  ++   +++  L   +  R+   +++G+ YLH ++   IIHRDLKA+N+L++
Sbjct:  356 ENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDI--EFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLD 487
[Close]
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.814e-11
Identity = 38/128 (29.69%), Postives = 69/128 (53.91%), Query Frame = 3 
Query:  186 GSYCDLY--KGAFFSQDVAIKVLTNEH-LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 560
            G++  +Y  + A   + VAIKV+  E  L   +     +E+ I+R+VRH N+VQ         +++ V E++ GG +++ + K +  LK  +  +    +   +++ H   + HRDLK  NLL++ENG
Sbjct:   37 GTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAKGR--LKEEMARKYFQQLISAVSFCHFRGVYHRDLKPENLLLDENG 162
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
EPA4A_DANRE9.814e-1133.33Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
CRK39_ARATH9.814e-1130.60Putative cysteine-rich receptor-like protein kinas... [more]
CIPKJ_ARATH9.814e-1129.69CBL-interacting serine/threonine-protein kinase 19... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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