DY262964

Overview
NameDY262964
Unique NameDY262964
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 49/143 (34.27%), Postives = 83/143 (58.04%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 563
            WEI+   +K    + +G + ++++G +  +  VA+K L    ++     EF +E  IM+++RH  ++Q    CT+   ++IVTE M  GS+ +YL      LKLP L+ +   V+ GM+YL + N IHRDL A N+L+ E+ +
Sbjct:  233 WEIEKKQIKLLRGLGAGQFGEVWEGLWNGTTSVAVKTLKPGTMSIE---EFLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGDGRSLKLPDLVDMCSQVASGMSYLEQQNYIHRDLAARNILVGEHKI 372          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRC_AVISS (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain S1) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    L+ E K+  G + +++ G +     VAIK L    ++      F QE  +M+K+RH  +V+     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN
Sbjct:  258 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVRLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 397          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRC1_XENLA (Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN=src-A PE=2 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    L+ E K+  G + +++ G +     VAIK L    ++      F QE  +M+K+RH  +VQ     +  P ++IVTE++S GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN
Sbjct:  257 DAWEIPRDSLRLELKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYISKGSLLDFL-KGEMGRYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 396          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: KSR2_MOUSE (Kinase suppressor of Ras 2 OS=Mus musculus GN=Ksr2 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 575
            W+I    L+    I  G +  +Y G +  + VAI+++  E  NE+  + F +EV   R+ RH NVV F+GAC  PP L I+T    G ++Y  +   K  L +    ++A ++ KGM YLH   I+H+DLK+ N+  +   V  +D
Sbjct:  669 WDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITD 813          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: KSR2_HUMAN (Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 575
            W+I    L+    I  G +  +Y G +  + VAI+++  E  NE+  + F +EV   R+ RH NVV F+GAC  PP L I+T    G ++Y  +   K  L +    ++A ++ KGM YLH   I+H+DLK+ N+  +   V  +D
Sbjct:  659 WDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITD 803          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: FGR_MOUSE (Proto-oncogene tyrosine-protein kinase Fgr OS=Mus musculus GN=Fgr PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.289e-18
Identity = 54/143 (37.76%), Postives = 86/143 (60.14%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 554
            D WEID + +  E ++ +G + D++ G +  S  VA+K L    ++    + F +E  IM+ +RH  +VQ     +  P ++IVTEFM  GS+ D+L  ++   L LP L+ +A  V++GM Y+ R N IHRDL+AAN+L+ E
Sbjct:  242 DAWEIDRNSIALERRLGTGCFGDVWLGTWNCSTKVAVKTLKPGTMSP---KAFLEEAQIMKLLRHDKLVQLYAVVSEEP-IYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDMAAQVAEGMAYMERMNYIHRDLRAANILVGE 380          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: YRK_CHICK (Proto-oncogene tyrosine-protein kinase Yrk OS=Gallus gallus GN=YRK PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.083e-17
Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            DVWEI    L+   K+ +G + +++ G +  +  VA+K L    ++      F +E  IM+++RH  +VQ     +  P ++IVTEFMS GS+ D+L K   G  LKLP L+ +A  ++ GM Y+ R N IHRDL+AAN+L+ +N
Sbjct:  261 DVWEIPRESLQLLQKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEA---FLEEAQIMKRLRHDKLVQLYAVVSEEP-IYIVTEFMSQGSLLDFL-KDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDN 400          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: TNI3K_PONAB (Serine/threonine-protein kinase TNNI3K OS=Pongo abelii GN=TNNI3K PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.083e-17
Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  138 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLF-IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR--NNIIHRDL 527
            + +  S ++F   I SGS+  +YKG   ++ VAIK    N + +++    F +EV I+ ++ H  V+QF+GAC   P  F IVT+++SGGS++  LH+QK  L L   L +A+DV++GM YLH     IIHRDL
Sbjct:  456 FHLQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRANTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHEQKRILDLQSKLIIAVDVARGMEYLHNLTQPIIHRDL 589          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRC_RSVSE (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Schmidt-Ruppin E) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.083e-17
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    L+ E K+  G + +++ G +     VAIK L    ++      F QE  +M+K+RH  +VQ     +  P ++IV E+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN
Sbjct:  258 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHKKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 397          
BLAST of DY262964 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.083e-17
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 3
Query:  132 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 557
            D WEI    L+ E K+  G + +++ G +     VAIK L    ++      F QE  +M+K+RH  +VQ     +  P ++IV E+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN
Sbjct:  258 DAWEIPRESLRLEAKLGQGCFGEVWMGTWNDTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 397          
The following BLAST results are available for this feature:
BLAST of DY262964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 403
Match NameE-valueIdentityDescription
SRK4_SPOLA8.289e-1834.27Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
SRC_AVISS8.289e-1837.93Tyrosine-protein kinase transforming protein Src O... [more]
SRC1_XENLA8.289e-1837.93Tyrosine-protein kinase Src-1 OS=Xenopus laevis GN... [more]
KSR2_MOUSE8.289e-1834.25Kinase suppressor of Ras 2 OS=Mus musculus GN=Ksr2... [more]
KSR2_HUMAN8.289e-1834.25Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2... [more]
FGR_MOUSE8.289e-1837.76Proto-oncogene tyrosine-protein kinase Fgr OS=Mus ... [more]
YRK_CHICK1.083e-1738.62Proto-oncogene tyrosine-protein kinase Yrk OS=Gall... [more]
TNI3K_PONAB1.083e-1741.04Serine/threonine-protein kinase TNNI3K OS=Pongo ab... [more]
SRC_RSVSE1.083e-1737.93Tyrosine-protein kinase transforming protein Src O... [more]
SRC_RSVP1.083e-1737.93Tyrosine-protein kinase transforming protein Src O... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262964 ID=DY262964; Name=DY262964; organism=Citrus clementina; type=EST; length=1322bp
AGACTGAACAGTTAAGAAATGTGCTGGCAAAGGAAATTCCCAAGGTTGAG
AATCATCATCATGTTGTATATCCTGTTGGGGAGCAAGAACAAAGTGGAAT
CAATCATGTAAACATACCAGCTGAAGGAATAGATGTTTGGGAAATTGATG
CTAGCTTGCTGAAATTTGAACATAAAATTGTATCTGGATCCTATTGTGAT
TTGTATAAAGGTGCTTTCTTTAGTCAAGATGTGGCTATTAAAGTTCTTAC
TAATGAACATCTAAACGAGAATATACGGAGGGAGTTTGCACAAGAAGTTC
ATATTATGAGGAAAGTTCGGCACATGAATGTCGTTCAATTCATTGGTGCA
TGTACTAGACCTCCAAGGCTGTTCATTGTGACTGAATTTATGTCTGGTGG
AAGCATCTATGACTACCTGCATAAACAAAAGTGCGGTTTAAAGCTTCCTT
TGCTACTCAGAGTTGCCATTGATGTTTCCAAGGGAATGAATTACTTGCAC
AGAAACAATATAATCCATAGGGACCTGAAAGCGGCCAATCTTTTGATGAA
TGAGAATGGAGTAAGAGATTCCGATATCCACTGTTATCTTAGTAATTTTT
TGTCGATATCCACTGTTATCTTGGTAATTTTTTCTTGTATTTTAGTGAGA
GCTTGATTTATCTACACAAGATTTCTGAAGATTAGTGATATAATTATGGA
TTGATTCCCTGACGAAGGAAGGTAGGCAACTTAAAAAGTTGGTAACAGAC
AAAGTGAGAGGTCCGCAGGCTTTGGTGCACTACTGATTCTGCTTAAGAAC
TTCACAACAGTAGCTTCTTAATAAATTAATTTCTTTATGATTATTACTGG
GGATTATTGTTTTATTTTTCAGTTCCAAATTGTGAACATATTTTTCACTC
TCAGTTTTTTGAACTTATTTTCACTTATGCTTTTGGGTGATGAGTGCTAA
TATCAGATTAATAAAAAGACATACACAGCTTTTTCGTTTCTGTTGAAAAT
GCAATCTTTCTTGGAATTCCAAAAAATGGTTTCAAAGGTTGGTCAGGGTT
GCTGAATTTGGGGTTGCCAAATTTCAAGCTTAAATAAGGGGTGAATGCCC
GGGGAAAACCGGAAAACGTACCGTTGGAAAGGGCTCCCAAAGGTTGGGGG
GTTAAATAATTTTTTTTTATTAAAATTTTTTCAATTTTAATTTTTTTTTT
AAAAATCAAAATAAATTTTTTTCTTTTTTTTTTAAAAAAAGTTTTTATTT
CTTAAAAAAAAATTTTTTTTTTAAATATGTGTGTGTTTTTTATTTAAAAA
TAAAAAGTTCTCCTAAAAATAA
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