DY263004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 6.113e-82 Identity = 142/295 (48.14%), Postives = 207/295 (70.17%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G +++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG +ASL+RL ++YVDV++ +RPD +TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR AL+ Y+ L + + ++ + +LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRAALKCYQWLKEKIISEEGRKQQTKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSNPEQL 364
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.779e-81 Identity = 142/295 (48.14%), Postives = 207/295 (70.17%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M +++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 382
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.779e-81 Identity = 142/295 (48.14%), Postives = 207/295 (70.17%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLK---PIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M +++LG+SGLRVS L G WV+FG Q+ + A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ EQ EY++ R KVE + LY G+G TWSPLA G+++GKY G +P SR +L+ Y+ L R + ++ + N+LK PIA+ LG L QLA+AWC N VSSV+ G + Q+ Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG-VPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQL 382
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 8.262e-79 Identity = 140/295 (47.46%), Postives = 203/295 (68.81%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDD---VLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG+Q+ + A++L+ +HGVN FD AEVYA GRAE +G+ +++ W+RS VV+TKI+WGGQ ++GLSRKHI+EG + SL+RL +DYVD+++ +R D ++P+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ EY++ R KVE + LY G+G TWSPLA G++TGKY ++P SR + + Y L +++ + +KV L PIAD L + QLAIAWC + VSSV+ G + Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVETQLPELYHKIGVGSMTWSPLACGLITGKYT-DTVPEKSRASFKGYHWLKEKAISQEGKKQHSKVKELHPIADRLNCTVTQLAIAWCLRSEGVSSVLLGVSNIEQL 364
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.319e-76 Identity = 148/302 (49.01%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 50 QNYKMQYKHLGRSGLRVSQLSYGAWVSFGNQ-LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGG--QGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDD---VLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 Q + ++ LGRSGL+VS S G W+++GN+ DV+ K+ L+ D G+N FD AE+Y+NG +E +MG+AI+ELGW RS+ V++TK+F+G + PN GLSRKHI+EG ASLKRL + YVDVI HRPD S P+EE VRA +I G AFYWGTSEWSA +I A IA + +L+ P+ +QP+YN L+R E + LPL YG G T WSPL SG+LTGKYN G IP SR + + +LA + + L++V ++ IA+++G +QLA+AW NP VS+ I G +K QI Sbjct: 9 QPKNVPFRFLGRSGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPVADQPQYNYLTRDHFEKDLLPLQQIYGYGATVWSPLKSGILTGKYNDG-IPEGSRLS-TTFTSLAGQLQTPEGKTQLDQVRQISKIAEQIGATPSQLALAWTLKNPYVSTTILGASKPEQI 308
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.723e-76 Identity = 139/295 (47.12%), Postives = 197/295 (66.78%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG+Q+ + A+ LL +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL RL ++YVD+++ +R D S+P+EE VRAM YVI++G A YWGTS WSA +I EA+ +A + +L+ P+ EQ E + R KVE + LY G+G TWSPLA ++T KY+ G +P + ++ Y+ L + +D +V L PIA +LG +AQLAIAWC + VSSV+ G + Q+ Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPLACSLITSKYD-GQVPDACKATVKGYQWLKEKVQSEDGKKQQARVTDLLPIAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQL 371
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 286.574 bits (732), Expect = 2.250e-76 Identity = 137/295 (46.44%), Postives = 198/295 (67.12%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLN---KVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 M+Y++LG+SGLRVS L G WV+FG+Q+ + A+ +L +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL+RL + YVD+++ +R D + P+EE VRAM YVI++G A YWGTS W A +I EA+ +A + +L+ P+ EQ E+++ R KVE + LY G+G TW PLA G++T KY+ G +P R +++ Y+ L + +D KV L P+A +LG +AQLAIAWC + VSSV+ G + Q+ Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYD-GRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQL 371
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.874e-44 Identity = 106/317 (33.44%), Postives = 179/317 (56.47%), Query Frame = 2 Query: 59 KMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYK--NLASRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQIQRT*KPM--MSFTTDSVS 985 +MQY++ G+SGLR+ LS G W +FG+ ++ +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ + + + ++ QP YN+L+R ++ L N G+G ++PLA G+LTGKY G IP DSR E K L + L + LN + L +A + G +AQ+A++W + V+SV+ G ++ Q++ + + ++F+T+ ++ Sbjct: 12 QMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLHEWK-IPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-IPEDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLVGASRAEQLEENVQALNNLTFSTEELA 326
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 8.630e-44 Identity = 107/310 (34.52%), Postives = 174/310 (56.13%), Query Frame = 2 Query: 59 KMQYKHLGRSGLRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYK--NLASRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQIQRT*KPMMSFT 970 +MQY++ G+SGLR+ LS G W +FG+ ++ +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ T+ R + ++ QP YN+L+R ++ L N G+G ++PLA G+LTGKY G IP DSR E K L + L + LN + L +A + G +AQ+A++W + V+SV+ G ++ Q++ + + + T Sbjct: 12 QMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPER-TQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-IPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLT 319
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 1.055e-41 Identity = 111/300 (37.00%), Postives = 169/300 (56.33%), Query Frame = 2 Query: 62 MQYKHLGRSGLRVSQLSYGAWVSFGNQ--------LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGTKESQI 937 MQY LG++ LRVS+L G ++FG L + ++ +++ + G+NFFD A Y++G +EEI+G+A+R+ +R D+VV+TK+F G +GLSR I+ SL+RL MDYVD++ HR D +TPIEET+ A+N V+ G A Y G S A Q +A + ++ + Q YN++ R + E E LPL G+ + WSPLA G LT + + + S E KNL S +D RL +++ELG AQ+A+AW S P +++ I G ++E Q+ Sbjct: 1 MQYNPLGKTDLRVSRLCLGC-MTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFA-RREDVVVATKVFHR-VGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREE-EREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSD---EVGKNLYKESDENDA-QIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQL 292 The following BLAST results are available for this feature:
BLAST of DY263004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263004 ID=DY263004; Name=DY263004; organism=Citrus clementina; type=EST; length=1303bpback to top |