DY263004

Overview
NameDY263004
Unique NameDY263004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1303
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.994e-12
Identity = 63/277 (22.74%), Postives = 126/277 (45.49%), Query Frame = 2
Query:  143 LDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKI--------FWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNR-LKPIADELGV-PLAQLAIAWCASNPNVSSVITGGTKESQIQR 943
            ++ ++A  LL    + G N  D A  Y N  +E  +G+ ++     R  IV++TK           GG+  N  G  +  +    + SL++L  D++D++Y H  D  + IEE + +++ ++ +G   Y G S+  A  ++ A   A         + Q ++N+L+R   E + +P+  ++G+ L  W  +      G++       + +   E  + ++  S   D   K++  L  +A+E G   +  +AIA+  S       + GG K   +++
Sbjct:    4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKL-RDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNR-DFERDIIPMARHFGMALAPWDVMGG----GRFQSKKAMEERKKNGEGLRTVSGTSKQTDKEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQ 274          
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.669e-12
Identity = 68/249 (27.31%), Postives = 111/249 (44.58%), Query Frame = 2
Query:   92 LRVSQLSYGAW-VSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGP-------NDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQ--ITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASG-VLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVL 805
            L+ S++ +G W ++  N  D  E  SL++ C DHG+  FD+A++Y     E++ G A+      R +I + TK     + P       +    S+ HI+   + SL  L  DY+D++  HRPD     E    A   +   G   Y+G S +   Q  + E++ + E+L     +  Q E +      +    L L     I    WSPLA G V T   +K       R ALE+ +     + +D+V+
Sbjct:   10 LQFSRVIHGLWRLNEWNYSDA-ELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESY-LPEKL-----VTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLAGGKVFTENTDKDR---RVRTALESVQGEIGAASLDEVM 248          
BLAST of DY263004 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.940e-11
Identity = 71/289 (24.57%), Postives = 123/289 (42.56%), Query Frame = 2
Query:   62 MQYKHLGRSG-LRVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIF-WGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNMLSRHKVEAEYLPLYSNYGIGLTTWSPLASGVLTGKYNKGSIPPDSRFALENYKNLASRSLVDDVLNKVNRLKPIADELGVPLAQLAIAWCASNPNVSSVITGGT 922
            MQ K +  SG + +  +  G W    +    K   + L+   + G+   D AE+YA+G AE+++G+A+  L   R  + + +K++ W   G        +  +   +ASL+RL+ DY+D+   H    S   EETV AM  +I +G    WG S      + E W +            Q  Y++ SR  +E + LP      + +  +SPLA     G+   G               L   ++V+++ +  N          +  AQ+ +AW  S+  V ++    T
Sbjct:    1 MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL---REKVFLVSKVYPWNAGG--------QKAINACEASLRRLNTDYLDLYLLHW-SGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCA---TNQVLYHLGSR-GIEYDLLPWCQQQQMPVMAYSPLAQ---AGRLRNG---------------LLKNAVVNEIAHAHN----------ISAAQVLLAWVISHQGVMAIPKAAT 245          
The following BLAST results are available for this feature:
BLAST of DY263004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
AAD4_YEAST2.994e-1222.74Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
YCSN_BACSU6.669e-1227.31Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]
YEAE_ECOLI1.940e-1124.57Uncharacterized protein yeaE OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263004 ID=DY263004; Name=DY263004; organism=Citrus clementina; type=EST; length=1303bp
TACAGTTGCCCAACAGGCCAAAAAACAGACAACAAAAAGGTTAAAAAAGC
AAAATTACAAAATGCAGTACAAGCACTTGGGGAGATCGGGGCTGAGAGTG
AGCCAGCTCTCGTACGGAGCGTGGGTCAGCTTCGGGAACCAGCTGGACGT
GAAGGAGGCGAAGTCGCTCTTGCAATGCTGCCGCGACCACGGCGTCAACT
TCTTCGACAATGCCGAGGTCTACGCCAACGGCCGCGCGGAAGAGATCATG
GGTCAGGCCATTCGCGAGCTCGGGTGGAAGCGATCCGACATCGTCGTTTC
CACCAAGATCTTTTGGGGCGGCCAGGGCCCCAACGATAAAGGCCTCTCCA
GAAAACACATTGTCGAGGGCACCAAAGCTTCCTTGAAACGCCTCGACATG
GATTACGTCGACGTTATTTATTGTCACAGGCCGGACACGTCGACACCGAT
AGAGGAGACGGTGAGGGCGATGAATTATGTGATTGATAAGGGGTGGGCGT
TTTACTGGGGAACAAGTGAGTGGTCGGCGCAGCAGATCACCGAGGCTTGG
GGGATTGCTGAGCGCTTGGATTTGGTGGGCCCCATTGTTGAGCAACCAGA
GTATAACATGTTGTCTAGGCACAAGGTTGAAGCTGAGTACCTCCCTTTAT
ACTCCAATTATGGCATAGGTCTTACCACATGGAGTCCACTTGCATCTGGA
GTCCTCACTGGAAAATATAACAAGGGATCTATACCACCTGACAGTCGGTT
TGCTTTGGAAAATTACAAGAATCTTGCTAGCCGATCACTGGTCGATGATG
TGCTGAATAAAGTTAACCGACTGAAGCCAATTGCAGATGAACTAGGCGTG
CCTTTAGCTCAACTTGCAATTGCATGGTGTGCTTCAAATCCTAATGTATC
TTCAGTTATAACTGGTGGCACAAAGGAATCCCAGATTCAGAGAACATGAA
AGCCAATGATGTCATTCACTACTGACTCCGTCAGTGATGGACAAGAATGA
GGCTGCTGTTCTAACAAAGCAAAGCGTCGGGAGTCGAATCGGAAGGCGGA
AAGATTTATAACTTCTTTTCTTCTTTCGGTGGCTGCCACAAACCAACCGG
TTCAAGGGGATTCGGGTGGGGCTAGGCTGGTCGGAAATTTTAATTATGGT
TTCCAACCTCCGTACTTCAAAAAACCCAAAAGTAAAAAATTTACTTGTAA
AAAAAAAAAAATTAATATTTTCTGGGTTTGGGAAAATGAGTGGAAGGGGG
GGGGAAAATTTATATTTGGCGCGAATCTTTTTTTTGGGTGTGTTTTTGGG
TGG
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