DY263005

Overview
NameDY263005
Unique NameDY263005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16
Identity = 75/336 (22.32%), Postives = 136/336 (40.48%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            ++ TAS D TIK W+ ++G   RT++                                            HT++V  + F   G  + S S D T+K+WD +   C          V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ + +N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W++       TL+GH  WV    F   G ++++ + D T R+W     +N  C+K       L +HE      LD  + +P++
Sbjct:  122 VMVTASEDATIKVWDYETGDFERTLK-------------------------------------------GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16
Identity = 75/336 (22.32%), Postives = 138/336 (41.07%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            ++ TAS D TIK W+ ++G   RT++                                            HT++V  + F   G  + S S D T+K+WD +   C +  +     V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ + +N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W++       TL+GH  WV    F   G ++++ + D T R+W     +N  C+K       L +HE      LD  + +P++
Sbjct:  122 VMVTASEDATIKVWDYETGDFERTLK-------------------------------------------GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: APAF_HUMAN (Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16
Identity = 82/325 (25.23%), Postives = 126/325 (38.77%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAA---GNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMW--DGS-LVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWIKG 1100
            +AT S DK +K W + +G    T      QVN    T + H+L  A    +  ++L+D+     +  M    HTN+V    F  D   + S S DGT+K+WD  +         R ++N      N  +                         P+ D  V      W  DG+ ++VAA N    +         T      +H    H+  I  C  SP+    +     A S + V++WN D  +      GH  WV   +FS DG   +T+S D T RLW    V  +  +   Q  +++    E+  L +D  R+   I G
Sbjct:  672 IATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSA------NERKSINVKQFFLNLED-------------------------PQEDMEVIVKCCSWSADGARIMVAAKNKIFLF------DIHTSGLLGEIHT--GHHSTIQYCDFSPQ----NHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLING 951          

HSP 2 Score: 73.9442 bits (180), Expect = 2.358e-12
Identity = 67/279 (24.01%), Postives = 119/279 (42.65%), Query Frame = 3
Query:  192 SGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTL--------EKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSE 1001
            +GR  +     ++QV+   ++P+  Y+A    N  I + ++ ++  +   S  QH   V  + F  D   + S S+D  +++W+ +   C      +  V    L  N + L+S   +G ++VW++   +   + V    T V S  +  D +   + +   T  +W       +     PLH+L+ HNG    C+    F      LAT   +  ++IWNV    L        E+    H  WV D  FS DG  LI+A      + W++   E+S+
Sbjct:  950 NGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNN--RIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLKN-SRLLSWSFDGTVKVWNIITGNKEKDFVCHQGT-VLSCDISHDATKFSSTSADKTAKIW-------SFDLLLPLHELRGHNG----CVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQ 1211          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16
Identity = 65/266 (24.44%), Postives = 121/266 (45.49%), Query Frame = 3
Query:  351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            HT++V  + F   G  + S S D T+K+WD +   C +  +     V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ + +N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W+V       TL+GH  WV   +F   G ++++ + D T R+W     +N  C+K       L +HE      LD  + +P++
Sbjct:  149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395          

HSP 2 Score: 81.2629 bits (199), Expect = 1.477e-14
Identity = 69/300 (23.00%), Postives = 129/300 (43.00%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++ +AS D TIK W+ ++G   RT++     V  +    +   LA+ + +  I+L+D      + + +   H +NV +V    +G+ + S + D T+K+W+++   C   +        +V  PNQ  T + S   +  +RVW +    C  EL             PE     +  A  S T      G  +++ +   T  +W +  G   MT       L  H+ ++   L    F    +++ + + D T+++W+       KTL  H+ +V    F     Y++T S D T ++W
Sbjct:  122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16
Identity = 70/299 (23.41%), Postives = 126/299 (42.14%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYES-RAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCEL------------VPEVDTAVRSLTVMWD-------GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++ +AS D TI+ W+ ++G   R+++     V  +        LA+ + +  I+L+D   S  + + +   H +NV +V F   G+++ S S D T+K+W++    C   Y   R  V  V +H   +   +   +  IRVW   +  C  EL             PE   +  +     D       G  + + +   T  +W +  G   +T       L  H+ ++      P      +YL +AS D T+++W++      KTL  HQ +     F     Y+I+ S D T ++W
Sbjct:  122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSY-ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLT-------LSGHDNWVRGLAFHPG----GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16
Identity = 65/266 (24.44%), Postives = 121/266 (45.49%), Query Frame = 3
Query:  351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            HT++V  + F   G  + S S D T+K+WD +   C +  +     V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ + +N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W+V       TL+GH  WV   +F   G ++++ + D T R+W     +N  C+K       L +HE      LD  + +P++
Sbjct:  149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395          

HSP 2 Score: 82.4185 bits (202), Expect = 6.629e-15
Identity = 70/300 (23.33%), Postives = 129/300 (43.00%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++ +AS D TIK W+ ++G   RT++     V  +    +   LA+ + +  I+L+D      + + +   H +NV +V    +G+ + S S D T+K+W+++   C   +        +V  PNQ  T + S   +  +RVW +    C  EL             PE     +  A  S T      G  +++ +   T  +W +  G   MT       L  H+ ++   L    F    +++ + + D T+++W+       KTL  H+ +V    F     Y++T S D T ++W
Sbjct:  122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16
Identity = 65/266 (24.44%), Postives = 120/266 (45.11%), Query Frame = 3
Query:  351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            HT++V  + F   G  + S S D T+K+WD +   C +  +     V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ +++N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W+V       TL+GH  WV   +    G Y+++ + D T R+W     +N  C K       L +HE      LD  + +P++
Sbjct:  149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD---YKNKRCTK------TLSAHEHF-VTSLDFHKTAPYV 395          

HSP 2 Score: 85.5001 bits (210), Expect = 7.831e-16
Identity = 71/300 (23.67%), Postives = 127/300 (42.33%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCELV-----------------PEVDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++ +AS D TIK W+ ++G   RT++     V  +        LA+ + +  I+L+D      + + +   H +NV +V    +G+ + S S D T+K+W++    C   +        +V  PNQ  T + S   +  +RVW +    C  EL                  P +  A  S T      G  +++ +   T  +W +  G   MT       L  H+ ++   L+ P      +Y+ + + D T++IW+       KTL  H+ +V    F     Y++T S D T ++W
Sbjct:  122 VIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV-RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT-------LVGHDNWVRGVLVHPG----GKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 4.591e-16
Identity = 64/266 (24.06%), Postives = 121/266 (45.49%), Query Frame = 3
Query:  351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094
            HT+++  + F   G  + S S D T+K+WD +   C +  +     V++V + PN   ++S  ++  I++W++    C        +  VR +    DG+L+ + +N  T  VW        +   E   +L+ H  ++++C+  +PE                  +P  +L + S D T+K+W+V       TL+GH  WV   +F   G ++++ + D T R+W     +N  C+K       L +HE      LD  + +P++
Sbjct:  149 HTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395          

HSP 2 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 69/300 (23.00%), Postives = 129/300 (43.00%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++ +AS D TIK W+ ++G   RT++     +  +    +   LA+ + +  I+L+D      + + +   H +NV +V    +G+ + S S D T+K+W+++   C   +        +V  PNQ  T + S   +  +RVW +    C  EL             PE     +  A  S T      G  +++ +   T  +W +  G   MT       L  H+ ++   L    F    +++ + + D T+++W+       KTL  H+ +V    F     Y++T S D T ++W
Sbjct:  122 VMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.996e-16
Identity = 68/283 (24.03%), Postives = 125/283 (44.17%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLE-ITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAH--NGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWV--WDCVFSVDGCYLITASSDATARLW 974
            L T+S DKT+K W      C RT+      VN       +K  + A+ +  +++++V +      +    HTN V    F    + + SGS D +V+IWD+R  +C     + +  V+ V  + + + + SG  +G +R+WD     C   LV + +  V  +    +G  ++++N   T  +W   +G       + L + Q H  N Y   C+ +       +++ + S D  + +WN+    + ++L GH + V   DC    +         D T R+W
Sbjct:   94 LGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK--GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG-------KTLKQYQGHENNKY---CIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: NUDFA_NEUCR (Nuclear distribution protein pac-1a OS=Neurospora crassa GN=pac-1a PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 5.996e-16
Identity = 77/316 (24.37%), Postives = 127/316 (40.19%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTE-----------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPH----------------RYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIK 1010
            LA+ S D+TIK W+ + G   RTI+     V                       DV    P+         N ++A           S S D T+K+WD          +S   + T+  H +              L+S  ++  +R+WD++   C   L    +  VR +    DG  +++ ++  T  +W +     T+TN EP   L  H   +L C ++P     +                 ++AT S D ++++W+  G T  KTL+GH  WV   VF   G YL++ S D T R W ++  +  +C+K
Sbjct:  129 LASGSEDQTIKIWDWELGELERTIKGHTKAV----------------------LDVDYGGPRG--------NTLLA-----------SCSSDLTIKLWD--------PLDSYKNIRTLPGHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEW-VRDVCPSLDGKYILSTSDDYTSRLWDV-----TITNPEPKVTLIGHEHVVLCCAIAPPAAYQNLAAMAGIKKPPATSSAEFMATGSRDKSIRLWDARG-TCIKTLVGHDNWVRGLVFHPGGKYLLSVSDDKTLRCWDLT--QEGKCVK 386          

HSP 2 Score: 72.0182 bits (175), Expect = 8.960e-12
Identity = 55/210 (26.19%), Postives = 90/210 (42.86%), Query Frame = 3
Query:  435 WDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDG----SLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEEL 1052
            W  RAP        R  +  V  HP  + L SG ++  I++WD         +          L V + G    +L+ + ++  T  +W        + +++ +  L  H+  +      P        L +AS D T++IW+V      KTL GH  WV D   S+DG Y+++ S D T+RLW ++       I +P+ K  L  HE +
Sbjct:  100 WLPRAPPRHTLQSHRDPITCVAFHPVFSSLASGSEDQTIKIWDWELGELERTIKGHTKAV---LDVDYGGPRGNTLLASCSSDLTIKLW------DPLDSYKNIRTLPGHDHSVSAVRFIPG---SGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSLDGKYILSTSDDYTSRLWDVT-------ITNPEPKVTLIGHEHV 290          
The following BLAST results are available for this feature:
BLAST of DY263005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
LIS1B_XENLA2.691e-1622.32Lissencephaly-1 homolog B OS=Xenopus laevis GN=paf... [more]
LIS1A_XENLA2.691e-1622.32Lissencephaly-1 homolog A OS=Xenopus laevis GN=paf... [more]
APAF_HUMAN2.691e-1625.23Apoptotic protease-activating factor 1 OS=Homo sap... [more]
LIS1_PIG3.515e-1624.44Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1_DROME3.515e-1623.41Lissencephaly-1 homolog OS=Drosophila melanogaster... [more]
LIS1_BOVIN3.515e-1624.44Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1A_DANRE3.515e-1624.44Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1... [more]
LIS1_PONAB4.591e-1624.06Platelet-activating factor acetylhydrolase IB subu... [more]
TG125_CAEBR5.996e-1624.03WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
NUDFA_NEUCR5.996e-1624.37Nuclear distribution protein pac-1a OS=Neurospora ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263005 ID=DY263005; Name=DY263005; organism=Citrus clementina; type=EST; length=1332bp
AGGTTCACTTCGCTTAGTTCATTATATGTGATCGCCCCCCGCGCCCGCCC
CCCCACCCCAAAAAAAAGCATTGATCCTCATTTCTATATACGAATTGAAT
CCGGCATTTGGAGTAGAATAAGATGGCACAGCCATCAGTGATACTCGCGA
CAGCTAGTTATGATAAGACAATCAAATTTTGGGAGGCCAAAAGCGGTCGC
TGCTACCGTACCATTCAATACCCTGATTCGCAAGTTAATCGGCTAGAGAT
AACTCCAAATAAACACTACCTGGCTGCTGCTGGTAATCCACATATTCGCT
TGTTTGATGTTACCTCAAGCAGCCCGCAGCCTGTGATGAGCTATGATCAG
CATACTAATAATGTTATGGCAGTGGGGTTTCAGTGTGATGGAAACTGGAT
GTATTCAGGTTCCGAGGATGGAACGGTAAAGATTTGGGATTTAAGGGCCC
CAGTTTGTCAAATGGAATACGAAAGTCGTGCTGCTGTTAACACTGTTGTA
TTGCACCCAAATCAGACTGAACTGATATCTGGCGACCAAAATGGGAATAT
TCGTGTGTGGGATTTGACAGCAAATTCTTGCAGTTGTGAACTGGTGCCAG
AGGTAGATACAGCTGTTAGGTCTTTAACAGTTATGTGGGACGGAAGCCTG
GTAGTTGCTGCTAATAACCATGGAACATGTTATGTTTGGCGCTTGATGCG
TGGGACTCAGACTATGACCAACTTTGAGCCACTTCATAAACTACAAGCAC
ATAATGGATACATCCTGAAATGTCTCCTTTCTCCGGAGTTTTGTGAACCC
CACAGATATCTGGCCACTGCATCTTCTGACCACACTGTCAAGATTTGGAA
TGTTGATGGTTTCACATTAGAAAAAACCTTGATAGGACATCAACGATGGG
TATGGGACTGTGTTTTCTCTGTAGATGGGTGCTATCTCATAACAGCCTCT
TCTGATGCGACAGCAAGACTATGGTCTATGTCACCGGTGGAGAACTCAGA
ATGTATCAAGGACCCACAAAGCAAAAATTTGTTGCCCTCTCATGAAGAAC
TTAACCCTCTGCTCCTTGACCAAAAACGGAAATCCCCTTGGATCAAGGGA
CCCCCTTGCAACATTATCTTCCCTTCCCGAAGGCCCCGAAACTGAAAAAA
TTGAACCAAAATTTTTTTTTGGCTTCCGGGGAATTTGAGGGCCAAAAAAA
AAATTTTGGGTGAAAAATTTTTATTCCAAAACTTAAGAAATTGGGACAAG
AATTTTGTTTTTTAAAAAACAAAAAAATTCAAAAAAAATTTCCCCTCTTT
TCCCCCTTTTAAAATAAGGTCTTTTTTTTTTG
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