DY263005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16 Identity = 75/336 (22.32%), Postives = 136/336 (40.48%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 ++ TAS D TIK W+ ++G RT++ HT++V + F G + S S D T+K+WD + C V++V + PN ++S ++ I++W++ C + VR + DG+L+ + +N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W++ TL+GH WV F G ++++ + D T R+W +N C+K L +HE LD + +P++ Sbjct: 122 VMVTASEDATIKVWDYETGDFERTLK-------------------------------------------GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16 Identity = 75/336 (22.32%), Postives = 138/336 (41.07%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 ++ TAS D TIK W+ ++G RT++ HT++V + F G + S S D T+K+WD + C + + V++V + PN ++S ++ I++W++ C + VR + DG+L+ + +N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W++ TL+GH WV F G ++++ + D T R+W +N C+K L +HE LD + +P++ Sbjct: 122 VMVTASEDATIKVWDYETGDFERTLK-------------------------------------------GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: APAF_HUMAN (Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.691e-16 Identity = 82/325 (25.23%), Postives = 126/325 (38.77%), Query Frame = 3 Query: 144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAA---GNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMW--DGS-LVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWIKG 1100 +AT S DK +K W + +G T QVN T + H+L A + ++L+D+ + M HTN+V F D + S S DGT+K+WD + R ++N N + P+ D V W DG+ ++VAA N + T +H H+ I C SP+ + A S + V++WN D + GH WV +FS DG +T+S D T RLW V + + Q +++ E+ L +D R+ I G Sbjct: 672 IATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSA------NERKSINVKQFFLNLED-------------------------PQEDMEVIVKCCSWSADGARIMVAAKNKIFLF------DIHTSGLLGEIHT--GHHSTIQYCDFSPQ----NHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLING 951 HSP 2 Score: 73.9442 bits (180), Expect = 2.358e-12 Identity = 67/279 (24.01%), Postives = 119/279 (42.65%), Query Frame = 3 Query: 192 SGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTL--------EKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSE 1001 +GR + ++QV+ ++P+ Y+A N I + ++ ++ + S QH V + F D + S S+D +++W+ + C + V L N + L+S +G ++VW++ + + V T V S + D + + + T +W + PLH+L+ HNG C+ F LAT + ++IWNV L E+ H WV D FS DG LI+A + W++ E+S+ Sbjct: 950 NGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNN--RIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLKN-SRLLSWSFDGTVKVWNIITGNKEKDFVCHQGT-VLSCDISHDATKFSSTSADKTAKIW-------SFDLLLPLHELRGHNG----CVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQ 1211
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16 Identity = 65/266 (24.44%), Postives = 121/266 (45.49%), Query Frame = 3 Query: 351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 HT++V + F G + S S D T+K+WD + C + + V++V + PN ++S ++ I++W++ C + VR + DG+L+ + +N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W+V TL+GH WV +F G ++++ + D T R+W +N C+K L +HE LD + +P++ Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395 HSP 2 Score: 81.2629 bits (199), Expect = 1.477e-14 Identity = 69/300 (23.00%), Postives = 129/300 (43.00%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974 ++ +AS D TIK W+ ++G RT++ V + + LA+ + + I+L+D + + + H +NV +V +G+ + S + D T+K+W+++ C + +V PNQ T + S + +RVW + C EL PE + A S T G +++ + T +W + G MT L H+ ++ L F +++ + + D T+++W+ KTL H+ +V F Y++T S D T ++W Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16 Identity = 70/299 (23.41%), Postives = 126/299 (42.14%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYES-RAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCEL------------VPEVDTAVRSLTVMWD-------GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974 ++ +AS D TI+ W+ ++G R+++ V + LA+ + + I+L+D S + + + H +NV +V F G+++ S S D T+K+W++ C Y R V V +H + + + IRVW + C EL PE + + D G + + + T +W + G +T L H+ ++ P +YL +AS D T+++W++ KTL HQ + F Y+I+ S D T ++W Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSY-ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLT-------LSGHDNWVRGLAFHPG----GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16 Identity = 65/266 (24.44%), Postives = 121/266 (45.49%), Query Frame = 3 Query: 351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 HT++V + F G + S S D T+K+WD + C + + V++V + PN ++S ++ I++W++ C + VR + DG+L+ + +N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W+V TL+GH WV +F G ++++ + D T R+W +N C+K L +HE LD + +P++ Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395 HSP 2 Score: 82.4185 bits (202), Expect = 6.629e-15 Identity = 70/300 (23.33%), Postives = 129/300 (43.00%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974 ++ +AS D TIK W+ ++G RT++ V + + LA+ + + I+L+D + + + H +NV +V +G+ + S S D T+K+W+++ C + +V PNQ T + S + +RVW + C EL PE + A S T G +++ + T +W + G MT L H+ ++ L F +++ + + D T+++W+ KTL H+ +V F Y++T S D T ++W Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 3.515e-16 Identity = 65/266 (24.44%), Postives = 120/266 (45.11%), Query Frame = 3 Query: 351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 HT++V + F G + S S D T+K+WD + C + + V++V + PN ++S ++ I++W++ C + VR + DG+L+ +++N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W+V TL+GH WV + G Y+++ + D T R+W +N C K L +HE LD + +P++ Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRPNQDGTLIASSSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD---YKNKRCTK------TLSAHEHF-VTSLDFHKTAPYV 395 HSP 2 Score: 85.5001 bits (210), Expect = 7.831e-16 Identity = 71/300 (23.67%), Postives = 127/300 (42.33%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCELV-----------------PEVDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974 ++ +AS D TIK W+ ++G RT++ V + LA+ + + I+L+D + + + H +NV +V +G+ + S S D T+K+W++ C + +V PNQ T + S + +RVW + C EL P + A S T G +++ + T +W + G MT L H+ ++ L+ P +Y+ + + D T++IW+ KTL H+ +V F Y++T S D T ++W Sbjct: 122 VIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV-RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT-------LVGHDNWVRGVLVHPG----GKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 4.591e-16 Identity = 64/266 (24.06%), Postives = 121/266 (45.49%), Query Frame = 3 Query: 351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC-QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLL-SPEFC----------------EPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLLDQKRKSPWI 1094 HT+++ + F G + S S D T+K+WD + C + + V++V + PN ++S ++ I++W++ C + VR + DG+L+ + +N T VW + E +L+ H ++++C+ +PE +P +L + S D T+K+W+V TL+GH WV +F G ++++ + D T R+W +N C+K L +HE LD + +P++ Sbjct: 149 HTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW-------VVATKECKAELREHE-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKRCMK------TLNAHEHF-VTSLDFHKTAPYV 395 HSP 2 Score: 81.6481 bits (200), Expect = 1.131e-14 Identity = 69/300 (23.00%), Postives = 129/300 (43.00%), Query Frame = 3 Query: 141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ--TELISGDQNGNIRVWDLTANSCSCEL------------VPE-----VDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974 ++ +AS D TIK W+ ++G RT++ + + + LA+ + + I+L+D + + + H +NV +V +G+ + S S D T+K+W+++ C + +V PNQ T + S + +RVW + C EL PE + A S T G +++ + T +W + G MT L H+ ++ L F +++ + + D T+++W+ KTL H+ +V F Y++T S D T ++W Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-------LVGHDNWVRGVL----FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.996e-16 Identity = 68/283 (24.03%), Postives = 125/283 (44.17%), Query Frame = 3 Query: 144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLE-ITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAH--NGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWV--WDCVFSVDGCYLITASSDATARLW 974 L T+S DKT+K W C RT+ VN +K + A+ + +++++V + + HTN V F + + SGS D +V+IWD+R +C + + V+ V + + + + SG +G +R+WD C LV + + V + +G ++++N T +W +G + L + Q H N Y C+ + +++ + S D + +WN+ + ++L GH + V DC + D T R+W Sbjct: 94 LGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK--GHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG-------KTLKQYQGHENNKY---CIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: NUDFA_NEUCR (Nuclear distribution protein pac-1a OS=Neurospora crassa GN=pac-1a PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 5.996e-16 Identity = 77/316 (24.37%), Postives = 127/316 (40.19%), Query Frame = 3 Query: 144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTE-----------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPH----------------RYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIK 1010 LA+ S D+TIK W+ + G RTI+ V DV P+ N ++A S S D T+K+WD +S + T+ H + L+S ++ +R+WD++ C L + VR + DG +++ ++ T +W + T+TN EP L H +L C ++P + ++AT S D ++++W+ G T KTL+GH WV VF G YL++ S D T R W ++ + +C+K Sbjct: 129 LASGSEDQTIKIWDWELGELERTIKGHTKAV----------------------LDVDYGGPRG--------NTLLA-----------SCSSDLTIKLWD--------PLDSYKNIRTLPGHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEW-VRDVCPSLDGKYILSTSDDYTSRLWDV-----TITNPEPKVTLIGHEHVVLCCAIAPPAAYQNLAAMAGIKKPPATSSAEFMATGSRDKSIRLWDARG-TCIKTLVGHDNWVRGLVFHPGGKYLLSVSDDKTLRCWDLT--QEGKCVK 386 HSP 2 Score: 72.0182 bits (175), Expect = 8.960e-12 Identity = 55/210 (26.19%), Postives = 90/210 (42.86%), Query Frame = 3 Query: 435 WDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDG----SLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEEL 1052 W RAP R + V HP + L SG ++ I++WD + L V + G +L+ + ++ T +W + +++ + L H+ + P L +AS D T++IW+V KTL GH WV D S+DG Y+++ S D T+RLW ++ I +P+ K L HE + Sbjct: 100 WLPRAPPRHTLQSHRDPITCVAFHPVFSSLASGSEDQTIKIWDWELGELERTIKGHTKAV---LDVDYGGPRGNTLLASCSSDLTIKLW------DPLDSYKNIRTLPGHDHSVSAVRFIPG---SGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSLDGKYILSTSDDYTSRLWDVT-------ITNPEPKVTLIGHEHV 290 The following BLAST results are available for this feature:
BLAST of DY263005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263005 ID=DY263005; Name=DY263005; organism=Citrus clementina; type=EST; length=1332bpback to top |