DY263005 | Citrus Genome Database

Overview


Name	DY263005
Unique Name	DY263005
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1332

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.278e-15
Identity = 68/283 (24.03%), Postives = 131/283 (46.29%), Query Frame = 3

Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT--QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITAS--SDATARLW 974
            LA++S DK IK W A  G+  +TI      ++ +  + + + L +A +   ++++DV  SS + + +   H+N V    F    N + SGS D +V+IWD++   C     + +  V+ V  + + + ++S   +G  R+WD  +  C   L+ + +  V  +    +G  ++AA    T  +W   +G   +T T     HK + +      C+ +       +++ + S D+ V IWN+    + + L GH   V           + +A+  +D T +LW
Sbjct:   60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG----HKNEKY------CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 2 Score: 83.5741 bits (205), Expect = 2.976e-15
Identity = 60/246 (24.39%), Postives = 111/246 (45.12%), Query Frame = 3

Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC--QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDT--AVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVD 857
            S +L +AS DKT+K W+  SG+C +T++   + V      P  + + +   +  +R++DV +   + + +   H++ V AV F  DG+ + S S DG  +IWD  +  C   +  +    V+ V   PN   +++   +  +++WD +   C        +    + +   +  G  +V+ +     Y+W L    QT    E + KLQ H   ++     P   E     A   +D T+K+W  D
Sbjct:   99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL----QTK---EIVQKLQGHTDVVISTACHP--TENIIASAALENDKTIKLWKSD 333

HSP 3 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 60/259 (23.17%), Postives = 119/259 (45.95%), Query Frame = 3

Query:  234 VNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGCYLITASSDATARLWSMSPVE 992
            V+ ++ +PN  +LA++  +  I+++       +  +S   H   +  V +  D N + S S+D T+KIWD+ +  C    +  +  V     +P    ++SG  + ++R+WD+    C  + +P     V ++    DGSL+V+++  G C +W    G    T  +        N  +     SP      +Y+  A+ D+T+K+W+       KT  GH+   + C+F+      G ++++ S D    +W++   E
Sbjct:   48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPN----GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.278e-15
Identity = 68/283 (24.03%), Postives = 131/283 (46.29%), Query Frame = 3

Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT--QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITAS--SDATARLW 974
            LA++S DK IK W A  G+  +TI      ++ +  + + + L +A +   ++++DV  SS + + +   H+N V    F    N + SGS D +V+IWD++   C     + +  V+ V  + + + ++S   +G  R+WD  +  C   L+ + +  V  +    +G  ++AA    T  +W   +G   +T T     HK + +      C+ +       +++ + S D+ V IWN+    + + L GH   V           + +A+  +D T +LW
Sbjct:   60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG----HKNEKY------CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 2 Score: 83.5741 bits (205), Expect = 2.976e-15
Identity = 60/246 (24.39%), Postives = 111/246 (45.12%), Query Frame = 3

Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC--QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDT--AVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVD 857
            S +L +AS DKT+K W+  SG+C +T++   + V      P  + + +   +  +R++DV +   + + +   H++ V AV F  DG+ + S S DG  +IWD  +  C   +  +    V+ V   PN   +++   +  +++WD +   C        +    + +   +  G  +V+ +     Y+W L    QT    E + KLQ H   ++     P   E     A   +D T+K+W  D
Sbjct:   99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL----QTK---EIVQKLQGHTDVVISTACHP--TENIIASAALENDKTIKLWKSD 333

HSP 3 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 60/259 (23.17%), Postives = 119/259 (45.95%), Query Frame = 3

Query:  234 VNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGCYLITASSDATARLWSMSPVE 992
            V+ ++ +PN  +LA++  +  I+++       +  +S   H   +  V +  D N + S S+D T+KIWD+ +  C    +  +  V     +P    ++SG  + ++R+WD+    C  + +P     V ++    DGSL+V+++  G C +W    G    T  +        N  +     SP      +Y+  A+ D+T+K+W+       KT  GH+   + C+F+      G ++++ S D    +W++   E
Sbjct:   48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPN----GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.278e-15
Identity = 68/283 (24.03%), Postives = 131/283 (46.29%), Query Frame = 3

Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGT--QTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITAS--SDATARLW 974
            LA++S DK IK W A  G+  +TI      ++ +  + + + L +A +   ++++DV  SS + + +   H+N V    F    N + SGS D +V+IWD++   C     + +  V+ V  + + + ++S   +G  R+WD  +  C   L+ + +  V  +    +G  ++AA    T  +W   +G   +T T     HK + +      C+ +       +++ + S D+ V IWN+    + + L GH   V           + +A+  +D T +LW
Sbjct:   60 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG----HKNEKY------CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 2 Score: 83.5741 bits (205), Expect = 2.976e-15
Identity = 60/246 (24.39%), Postives = 111/246 (45.12%), Query Frame = 3

Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC--QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDT--AVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVD 857
            S +L +AS DKT+K W+  SG+C +T++   + V      P  + + +   +  +R++DV +   + + +   H++ V AV F  DG+ + S S DG  +IWD  +  C   +  +    V+ V   PN   +++   +  +++WD +   C        +    + +   +  G  +V+ +     Y+W L    QT    E + KLQ H   ++     P   E     A   +D T+K+W  D
Sbjct:   99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL----QTK---EIVQKLQGHTDVVISTACHP--TENIIASAALENDKTIKLWKSD 333

HSP 3 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 60/259 (23.17%), Postives = 119/259 (45.95%), Query Frame = 3

Query:  234 VNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGCYLITASSDATARLWSMSPVE 992
            V+ ++ +PN  +LA++  +  I+++       +  +S   H   +  V +  D N + S S+D T+KIWD+ +  C    +  +  V     +P    ++SG  + ++R+WD+    C  + +P     V ++    DGSL+V+++  G C +W    G    T  +        N  +     SP      +Y+  A+ D+T+K+W+       KT  GH+   + C+F+      G ++++ S D    +W++   E
Sbjct:   48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPN----GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 292

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.278e-15
Identity = 62/247 (25.10%), Postives = 109/247 (44.13%), Query Frame = 3

Query:  267 YLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNN---VMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQME-YESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEV---DTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEK----TLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            YLA   N   +++DV +         +   +    + +V F  DGN++ +G+ED TVK+WD+     Q   Y     + ++    +   ++SG  +   ++WD+    C+  L  E       V S+ +  DG LV A +      +W    G          + L+ + G+ L  + S  F    + LA+ S D ++K+W++ G         T  GH+ +V    FS DG +LI+ S D + + W
Sbjct:  295 YLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG----------YFLERYEGH-LDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530

HSP 2 Score: 77.0258 bits (188), Expect = 2.785e-13
Identity = 58/246 (23.58%), Postives = 107/246 (43.50%), Query Frame = 3

Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYL-AAAGNPHIRLFDVTSSSPQPVMSYDQ--HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTA----NSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVD 857
            LAT + DKT+K W+  + +   T    +  +  L+ + +  ++ + +G+   +++D+        +  ++    N V +V    DG  + +GS D  V++WD +       YE    +V +V   P+   L SG  + ++++WDL+     + C        D  V S+    DGS +++ +   +   W    GT  M        LQ H   ++   LSP+    H   AT S D   ++W  D
Sbjct:  342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD-FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHM-------MLQGHKNSVISVALSPK-NNSHGVFATGSGDFRSRLWKYD 578

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: WDR61_XENLA (WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.976e-15
Identity = 64/278 (23.02%), Postives = 125/278 (44.96%), Query Frame = 3

Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVN--RLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSD 956
            S ++ + S D  +K W+    R          Q+    ++++P+ + +A++  + HIRL+D+ S   + + S D    +  +V F  D   + +GS  G V I+ +     +   ++R   + ++   P+   L SG  +G I ++D+        L       +RSLT   D  L+V A++ G   ++ +   +   T       L  H  ++L    SP+      +  ++SSD +VK+W+V   T   T + HQ  VW   ++ +G  +++   D
Sbjct:   32 SELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESG--KQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA-MPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAAT-------LSGHGSWVLNVAFSPD----DAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDD 295

HSP 2 Score: 70.0922 bits (170), Expect = 3.405e-11
Identity = 56/216 (25.93%), Postives = 95/216 (43.98%), Query Frame = 3

Query:  351 HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVN--TVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTA---VRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMS 983
            H   V++V     GN M S S D  +++WDL +   Q+       V+  +V   P+   L +G   G + ++ +        L    DT    + S+    DG  + +    G   ++ +  G       + LH L+ H       + S  F    + L TAS D  +KI++V   +L  TL GH  WV +  FS D  + +++SSD + ++W +S
Sbjct:   63 HQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGK-QIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL----DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-------KLLHTLEGH----AMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVS 262

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.886e-15
Identity = 73/313 (23.32%), Postives = 138/313 (44.09%), Query Frame = 3

Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMW--DGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEELNPLLL 1067
            ++A+AS D T+  W  + G   R        + R++ +PN    A AG    ++++D+  +  Q +     H ++V +V F  DG  + S S D TV++W  R+            +V+     P+   L+S  ++G IR+WDL  N      +PEV        V W  +G+L+  A + GT  +W            E    L  H+ ++ + + +P+     + L ++SS+ +V  W+  G  L+K   G+   ++    + +G  L   + +   ++W MSP  +   +  P     +  + + N + L
Sbjct:  574 LIASASRDGTVHLWTPQ-GEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLKG---HQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQFGLPEV----AFFGVNWHPNGNLLAVAADDGTVRLWT--------PQGEIKATLSGHDEFVTRVVFTPD----GKQLFSSSSNGSVIHWSTSGKMLKKYQ-GYPEAIFGLALASNGALLAIGAENNLVKVWDMSPKSDLVNLNLPAVLGAVAENAKTNTIAL 865

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: UTP12_YEAST (U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces cerevisiae GN=DIP2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.886e-15
Identity = 73/321 (22.74%), Postives = 139/321 (43.30%), Query Frame = 3

Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRA-------------PVCQMEYESRAAVNTVVL----HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHK-LQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEE 1049
            +LATAS + ++K W  K+ +C RT +   +   +  +      +    N  ++LFD+ SSS    +  D H   + ++    DG  + +GS D TVK WD +              PV ++ +++   +   +L     P+   L     +  ++V+ L +      L       V S+ + +D  +++ ++      +W L        +F   HK L AH   I+     P+    H + +  S D  VK W+ + F   + L  HQ  VW    + DG +++++S D + R+W     E+   +++ + K L   +E+
Sbjct:  405 LLATAS-NGSLKIWNIKTHKCIRTFECGYALTCKF-LPGGLLVILGTRNGELQLFDLASSSLLDTIE-DAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGH-KLPVLSIDISFDSKMIITSSADKNIKIWGL--------DFGDCHKSLFAHQDSIMNVKFLPQ---SHNFFS-CSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIW--EETEDQVFLEEEKEKELEEQYED 707

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.886e-15
Identity = 69/291 (23.71%), Postives = 123/291 (42.27%), Query Frame = 3

Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDP 1016
            + + S D T+K W A +G+C RT+                                             HT  V +   Q  GN + SGS D T+K+WD+ +  C    +   +     +H + ++++SG ++  +RVWD+   SC   LV  +  AVR   V +DG L+V+        +W   R        E LH LQ H   +     S +F   H  + + S D ++++W+V+    + TL+GHQ          +   L++ ++D+T ++W ++  +  + +  P
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLV-------------------------------------------GHTGGVWSS--QMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTS-TVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHL-AAVR--CVQYDGKLIVSGAYDYMVKIWHPERQ-------ECLHTLQGHTNRV----YSLQFDGLH--VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGP 1234

HSP 2 Score: 71.2478 bits (173), Expect = 1.528e-11
Identity = 66/240 (27.50%), Postives = 110/240 (45.83%), Query Frame = 3

Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWD--GSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNV 854
            I+ + S D+T+K W+  SG C  T+Q   S V  + +  +K  ++ + +  +R++D+   S   V+    H   V  V  Q DG  + SG+ D  VKIW      C    +         L  +   ++SG  + +IRVWD+   +C   L+       +SLT   +   +++V+ N   T  VW +  G    T   P      H+  +  CL   +F    R++ T+S D TVK+W+V
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK-VVSGSRDATLRVWDIEQGSCLHVLV--GHLAAVRCV--QYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTN-RVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGH-----QSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGP----NKHHSAV-TCL---QF--NSRFVVTSSDDGTVKLWDV 1265

HSP 3 Score: 69.3218 bits (168), Expect = 5.808e-11
Identity = 65/251 (25.90%), Postives = 109/251 (43.43%), Query Frame = 3

Query:  324 PQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHP--------NQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEEL 1052
            P+ +  +D H    +    Q  GN + SGS+D T+K+W      C         + T+V H         +   +ISG  +  ++VWD+ + +C   L     T VR + +   GS VV+ +   T  VW + +G+        LH L  H   + +C+         + + + + D+ VKIW+ +      TL GH   V+   F  DG ++++ S D + R+W    VE   C      K+ L  H+ L
Sbjct:  987 PKVLKGHDDHVITCL----QFSGNRIVSGSDDNTLKVWSAVNGKC---------LRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTST-VRCMHL--HGSKVVSGSRDATLRVWDIEQGS-------CLHVLVGHLAAV-RCVQ-----YDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWD---VETGNC------KHTLMGHQSL 1197

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.076e-15
Identity = 75/284 (26.41%), Postives = 119/284 (41.90%), Query Frame = 3

Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVW--RLMRGTQTM-TNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWS 977
            IL TAS DKT K W    G      +     V  ++  P    LA+ G    ++++D      + V ++  H   + +V F   G  + SGS D TV++WDL A  C+M       +VN +   P  + L +   +  + VWD  A  C+       ++    ++    G+ + + +  G   +W  R+     T+ T   P +K          C     F    + LA A  D  VK ++     L+  L GH+  V   +F   G YL++  SD T RLWS
Sbjct:  340 ILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLASGGGDSAVKIWDFEKQ--RCVTTFTDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSSLATASSDKTVSVWDARAGLCTQTYYGHQNSC-NGVSFNILGTQLASTDADGVVKLWDTRMTAEVATINTGKHPANK---------SC-----FDRSGQVLAVACDDGKVKAYSTTDGVLQAELAGHEDAVQAVLFDPAGQYLVSCGSDNTFRLWS 606

[Close]

BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: MHCKA_DICDI (Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.076e-15
Identity = 78/312 (25.00%), Postives = 136/312 (43.59%), Query Frame = 3

Query:  102 RHLE*NKMAQPSVILATASYDKTIKF---------WEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAA-GNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRA---PVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILK--CLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVE 992
            + L+   M  P ++      D TIK          +  K  +C  TIQ    +VN +    N+  L A  G+   R+FDV  +  + + + + H  ++ ++   C+ N++++ S D T+K+  +R+      +        VN VV   N+  L S   +  I+VWDL+               +++L +   G  + +  N    YVW     T+T++    L  +Q H  ++L   C  S        YL + S D+ +KIW++  F+   TL GH   V  CV  V   YL + S D + ++W +  +E
Sbjct:  819 KQLQQGTMVMPDILPELMPSDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNW-KCLYTVNGHRKSIESIA--CNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVA--NEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIYVW----DTETLSM---LFNMQGHEDWVLSLHCTAS--------YLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCV--VKDRYLYSGSEDNSIKVWDLDTLE 1106

The following BLAST results are available for this feature:

BLAST of DY263005 vs. ExPASy Swiss-Prot

BLAST of DY263005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188


Match Name	E-value	Identity	Description
WDR5_MOUSE	2.278e-15	24.03	WD repeat-containing protein 5 OS=Mus musculus GN=...	[more]
WDR5_HUMAN	2.278e-15	24.03	WD repeat-containing protein 5 OS=Homo sapiens GN=...	[more]
WDR5_BOVIN	2.278e-15	24.03	WD repeat-containing protein 5 OS=Bos taurus GN=WD...	[more]
TUP1_DICDI	2.278e-15	25.10	General transcriptional corepressor tupA OS=Dictyo...	[more]
WDR61_XENLA	2.976e-15	23.02	WD repeat-containing protein 61 OS=Xenopus laevis ...	[more]
Y143_SYNY3	3.886e-15	23.32	Uncharacterized WD repeat-containing protein slr01...	[more]
UTP12_YEAST	3.886e-15	22.74	U3 small nucleolar RNA-associated protein 12 OS=Sa...	[more]
FBXW7_DROME	3.886e-15	23.71	F-box/WD repeat-containing protein 7 OS=Drosophila...	[more]
PF20_CHLRE	5.076e-15	26.41	Flagellar WD repeat-containing protein Pf20 OS=Chl...	[more]
MHCKA_DICDI	5.076e-15	25.00	Myosin heavy chain kinase A OS=Dictyostelium disco...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10CC04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY263005 ID=DY263005; Name=DY263005; organism=Citrus clementina; type=EST; length=1332bp
AGGTTCACTTCGCTTAGTTCATTATATGTGATCGCCCCCCGCGCCCGCCC
CCCCACCCCAAAAAAAAGCATTGATCCTCATTTCTATATACGAATTGAAT
CCGGCATTTGGAGTAGAATAAGATGGCACAGCCATCAGTGATACTCGCGA
CAGCTAGTTATGATAAGACAATCAAATTTTGGGAGGCCAAAAGCGGTCGC
TGCTACCGTACCATTCAATACCCTGATTCGCAAGTTAATCGGCTAGAGAT
AACTCCAAATAAACACTACCTGGCTGCTGCTGGTAATCCACATATTCGCT
TGTTTGATGTTACCTCAAGCAGCCCGCAGCCTGTGATGAGCTATGATCAG
CATACTAATAATGTTATGGCAGTGGGGTTTCAGTGTGATGGAAACTGGAT
GTATTCAGGTTCCGAGGATGGAACGGTAAAGATTTGGGATTTAAGGGCCC
CAGTTTGTCAAATGGAATACGAAAGTCGTGCTGCTGTTAACACTGTTGTA
TTGCACCCAAATCAGACTGAACTGATATCTGGCGACCAAAATGGGAATAT
TCGTGTGTGGGATTTGACAGCAAATTCTTGCAGTTGTGAACTGGTGCCAG
AGGTAGATACAGCTGTTAGGTCTTTAACAGTTATGTGGGACGGAAGCCTG
GTAGTTGCTGCTAATAACCATGGAACATGTTATGTTTGGCGCTTGATGCG
TGGGACTCAGACTATGACCAACTTTGAGCCACTTCATAAACTACAAGCAC
ATAATGGATACATCCTGAAATGTCTCCTTTCTCCGGAGTTTTGTGAACCC
CACAGATATCTGGCCACTGCATCTTCTGACCACACTGTCAAGATTTGGAA
TGTTGATGGTTTCACATTAGAAAAAACCTTGATAGGACATCAACGATGGG
TATGGGACTGTGTTTTCTCTGTAGATGGGTGCTATCTCATAACAGCCTCT
TCTGATGCGACAGCAAGACTATGGTCTATGTCACCGGTGGAGAACTCAGA
ATGTATCAAGGACCCACAAAGCAAAAATTTGTTGCCCTCTCATGAAGAAC
TTAACCCTCTGCTCCTTGACCAAAAACGGAAATCCCCTTGGATCAAGGGA
CCCCCTTGCAACATTATCTTCCCTTCCCGAAGGCCCCGAAACTGAAAAAA
TTGAACCAAAATTTTTTTTTGGCTTCCGGGGAATTTGAGGGCCAAAAAAA
AAATTTTGGGTGAAAAATTTTTATTCCAAAACTTAAGAAATTGGGACAAG
AATTTTGTTTTTTAAAAAACAAAAAAATTCAAAAAAAATTTCCCCTCTTT
TCCCCCTTTTAAAATAAGGTCTTTTTTTTTTG