DY263005

Overview
NameDY263005
Unique NameDY263005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: YQ95_SCHPO (Uncharacterized WD repeat-containing protein C18.05c OS=Schizosaccharomyces pombe GN=SPCC18.05c PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 85/318 (26.73%), Postives = 140/318 (44.03%), Query Frame = 3
Query:  126 AQPSVILATASYDKTIKFWEAKSGR----CYRTIQYPDSQV--NRLEITPNKH-YLAAAGNPH--IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEE 1049
            A  + I+AT S D TI+FW+ K G       R    P   +    L + P+   YL A+G+    +R+++V   +   + +   HT  +  V +    NW+YS S D T++IWD +   C    +  AA VN + L    TE +   ++G     D    S S E     +     L     G  +V+A++     +W   + T+      P+ K+  H   +     SP+     R +ATAS D +V++W+        TL GH   V+ C +S D   L+++S D T ++W          ++  + K  LP HE+
Sbjct:  186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTL--LFTLSGHTAPITCVRWGGQ-NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSL---STEHVL--RSGAYDHTDFKPKSFSDERRKAKERYEACLKQ--SGERLVSASDDLQLILWDPQKSTK------PITKMHGHQKVVNHASFSPD----GRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWD---------VRSKKMKFDLPGHED 474          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.131e-14
Identity = 58/251 (23.11%), Postives = 115/251 (45.82%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLE-ITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGH 890
            L T+S DKT+K W      C RT+      VN +   + ++  ++A+ +  +++F++ +S  +   +   H N V    F    + + SGS D +V+IWD++  +C     + +  V+ V  + + + + SG  +G +R+WD     C   LV + +  V  +    +G  ++A+N   T  +W   +G       + L +   H      C+ +       +++ + S D  + IWN+    + + L GH
Sbjct:  102 LGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS--RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG-------KTLKQYTGHEN-SKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGH 342          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: YCW2_YEAST (WD repeat-containing protein YCR072C OS=Saccharomyces cerevisiae GN=YCR072C PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.477e-14
Identity = 75/279 (26.88%), Postives = 115/279 (41.22%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLE-KTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            ++AT S D TI+ W+ KSG+C                      L  A   H +   +TS S +P+      +   +A           S S+DGT+KIWD  + VCQ          + V    Q  L SG  +  +RVWD+ +      ++      V  L++  D +L + A +H          G +  T  E   K   +   I K   + E       + TAS D+T+ +WN    T     + GHQ+ V    FS DG Y+++AS D + +LW
Sbjct:  200 VIATGSMDNTIRLWDPKSGQC----------------------LGDALRGHSKW--ITSLSWEPIHLVKPGSKPRLA-----------SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDH---------TGKKPSTPEEAQKKALENYEKICKKNGNSE-----EMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW 429          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: GBLP_CHLRE (Guanine nucleotide-binding protein subunit beta-like protein OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.929e-14
Identity = 76/302 (25.17%), Postives = 135/302 (44.70%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKS-----GRCYRTIQYPDSQVNRLEITPNKHY-LAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWD--------LRAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWN------VDGFTLEKTLIGHQRWVWDCV---FSVDGCYLITASSDATARLWSM 980
            L +AS DK++  WE +      G   + ++     V  + I+ +  + L  + +  +RL+D+ + +      +  HT +V++V F  D   + SGS D T+K+W+        +  P    E+ S    + +  +P    ++SG  +  ++VW+LT       LV      V ++TV  DGSL  +    G   +W L  G +       L+ L A  G ++ CL       P+RY   A++  ++KIW+      VD    E  +   +  V  CV   +S DG  L +  +D   R+W++
Sbjct:   32 LLSASRDKSVLVWELERSESNYGYARKALRGHSHFVQDVVISSDGQFCLTGSWDGTLRLWDLNTGTT--TRRFVGHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIGEPEGHTEWVSCVRFSPMTTNPI---IVSGGWDKMVKVWNLTNCKLKNNLVGH-HGYVNTVTVSPDGSLCASGGKDGIAMLWDLAEGKR-------LYSLDA--GDVIHCLC----FSPNRYWLCAATQSSIKIWDLESKSIVDDLRPEFNITSKKAQVPYCVSLAWSADGSTLYSGYTDGQIRVWAV 314          

HSP 2 Score: 72.7886 bits (177), Expect = 5.253e-12
Identity = 56/219 (25.57%), Postives = 90/219 (41.10%), Query Frame = 3
Query:  351 HTNNVMAVGFQCD--GNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA------VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMS 983
            HTN V A+    D   N + S S D +V +W+L        Y  +A       V  VV+  +    ++G  +G +R+WDL   + +   V      V S+    D   +V+ +   T  +W  + G    T  EP    + H  ++     SP    P   + +   D  VK+WN+    L+  L+GH  +V     S DG    +   D  A LW ++
Sbjct:   14 HTNWVTAIATPLDPSSNTLLSASRDKSVLVWELERSESNYGYARKALRGHSHFVQDVVISSDGQFCLTGSWDGTLRLWDLNTGTTTRRFVGHTKD-VLSVAFSVDNRQIVSGSRDKTIKLWNTL-GECKYTIGEP----EGHTEWVSCVRFSPMTTNP--IIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGIAMLWDLA 224          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.519e-14
Identity = 44/144 (30.56%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTELISGDQNGNIRVWDL 566
            ++   S   +++ W+ ++ +  RT+    + V+ L+  P   ++A+   + +I+L+DV       V  Y  HT  V  + F  DG W+ S S+D +VK+WDL A     E  E +  VN +  HPN+  L SG  +  +R WDL
Sbjct:   77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGC--VFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218          

HSP 2 Score: 78.5666 bits (192), Expect = 9.573e-14
Identity = 64/240 (26.67%), Postives = 107/240 (44.58%), Query Frame = 3
Query:  270 LAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLR-APVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSP 986
            L A G    R+   + + P  +MS   HT  V +V F      + +GS+ G+++IWDL  A + +     +A V+++  HP    + SG  + NI++WD+    C          AVR L    DG  + +A++  +  +W L  G       + + +L  H G +       EF      LA+ S+D TV+ W+++ F L     G    V   +FS DG  +     D + R++   P
Sbjct:   35 LVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQ-AVRCLRFSPDGKWLASASDDHSVKLWDLTAG-------KMMAELSEHKGPVNII----EFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKD-SLRVYGWEP 261          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 3.290e-14
Identity = 67/265 (25.28%), Postives = 118/265 (44.53%), Query Frame = 3
Query:  267 YLAAAGNPHIRLFDVTSSSPQPVMSY-DQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAP----VCQMEYESR-AAVNTVVLHPNQ-----TELISGDQNGNIRVWDLTANSCSCEL-------VPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECI 1007
            +LA   N      DV S+    V    + HT+ V+ +    DG W+ +G++D TV++W+L        C   +    A+V  V L P       T L S  Q+  ++ ++L +     +        +   D  V ++ V  DG ++ +A+   T  +W    G       E +  L+ H   +  C  +P      R LA+ S D T++IWNVD     +TL GH   +   ++   G  +++A++D   ++WS+S   + EC+
Sbjct:  336 HLAVCSNTEF--IDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTG-------EVVGVLRGHRRGVWACSFNPF----SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS---SGECV 584          

HSP 2 Score: 69.707 bits (169), Expect = 4.447e-11
Identity = 53/193 (27.46%), Postives = 92/193 (47.67%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKS--------GRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAAVNTVVLHPNQ-TELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWR 692
            LA++S D+T+K +   S         R   TI+  D  VN ++++ +   +A+A     I+L+D  SS+ + V     H   V A  F      + SGS D T++IW++    C    E        +++ +Q T+++S   +G ++VW L++  C   L    D  V +L   +DGSL+V+        VW+
Sbjct:  430 LASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD--SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDR-VWALASRFDGSLLVSGGADAVVSVWK 619          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: TBL3_HUMAN (Transducin beta-like protein 3 OS=Homo sapiens GN=TBL3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.290e-14
Identity = 73/330 (22.12%), Postives = 147/330 (44.55%), Query Frame = 3
Query:  123 MAQPSVILATASYDKTIKFWEAKSGRCYRTIQ-YPDSQVNRLEITP-NKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAP-----VCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEV--------------DTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKDPQSKNLLPSHEE 1049
            +A  + ++ TA+ D  +  +EA+S R  +    Y +  ++   + P + H + A+ +P +++F++ +S+ Q +     HT+ V+A+     G    S ++D +V+IW +        V Q    + +          ++ L++G Q+  +++W L     S    P+               D  + S+ +  +  L+   +   T  +W L +             L   +G+  + L   +F    + LATAS+D T+K+W +  F+  KT  GH   V    F   G  L+++ SD   +LW+   ++N+EC++       L +HE+
Sbjct:  300 LAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHG---HTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQ----------CQLLGVFSGH-RRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWT---IKNNECVR------TLDAHED 606          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.297e-14
Identity = 65/283 (22.97%), Postives = 129/283 (45.58%), Query Frame = 3
Query:  144 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRG--TQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITAS--SDATARLW 974
            LA++S DK IK W A  G+  +TI      ++ +  + +   L +  +   ++++++  S+ + + +   H+N V    F    N + SGS D +V+IWD+R   C     + +  V+ V  + + + ++S   +G  R+WD  +  C   L+ + +  V  +    +G  ++AA    T  +W   +G   +T T     HK + +      C+ +       +++ + S D+ V IWN+    + + L GH   V           + +A+  +D T +LW
Sbjct:   87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWEL--STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTG----HKNEKY------CIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357          

HSP 2 Score: 77.411 bits (189), Expect = 2.133e-13
Identity = 58/249 (23.29%), Postives = 110/249 (44.18%), Query Frame = 3
Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVC--QMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDT--AVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYL---ATASSDHTVKIWNVD 857
            S +L + S DKT+K WE  +G+  +T++   + V      P  + + +   +  +R++DV +   + + +   H++ V AV F  DG+ + S S DG  +IWD  +  C   +  +    V+ V   PN   +++   +  +++WD +   C        +    + +   +  G  +V+ +     Y+W L        + E + KLQ H   +L C      C P   +   A   +D T+K+W  D
Sbjct:  126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG--KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQ-------SKEVVQKLQGHTDTVL-CTA----CHPTENIIASAALENDKTIKLWKSD 360          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.297e-14
Identity = 69/290 (23.79%), Postives = 116/290 (40.00%), Query Frame = 3
Query:  135 SVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNK---------HYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLW 974
            S +LATA +    K W         T++  ++ V  +   P           +  + A +  ++L+ + S   +PV   + HT  V  V +   G ++ +   D + ++WDL A    +  E  +  V  +  H + +   +G  +   RVWDL    C   L   +   +  +    +G  +   +   TC VW L +     T       + AH   +      P       +L T + D+T KIW   G++  KTL GH+  V     S DG  + T S D T +LW
Sbjct:  242 SKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSD--EPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE-IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT-------IPAHQNLVTGVKFEPIH---GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518          
BLAST of DY263005 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.297e-14
Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  141 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTA-NSCSCELVPEVDTAVRSLTVMWDG 644
            ++   S   +I+ W+ ++ +  RT+    + +  L+  P   ++A+   +  I+L+DV       +  Y  HT  V  + F  DG W+ S ++D TVK+WDL A     E+   +  VN V  HP++  L SG  +  IR WDL   +  SC  + E  T VR +    DG
Sbjct:   77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGC--IFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSC--IEEEATPVRCILFNPDG 243          

HSP 2 Score: 77.0258 bits (188), Expect = 2.785e-13
Identity = 61/254 (24.02%), Postives = 113/254 (44.49%), Query Frame = 3
Query:  228 SQVNRLEITPNKHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLR-APVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSP 986
            S V+ L +  +   L A G    R+   + + P  VMS   HT  + ++        + +GS+ G++++WDL  A + +     +A + ++  HP  + + SG  + +I++WD+    C  +       AVR L    DG  + +A +  T  +W L  G       + + +   H+G +       EF      LA+ SSD T++ W+++ F +   +      V   +F+ DGC L     D + R++   P
Sbjct:   21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDGKWLASAADDHTVKLWDLTAG-------KVMFEFTGHSGPVNVV----EFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWEP 261          

HSP 3 Score: 72.7886 bits (177), Expect = 5.253e-12
Identity = 56/223 (25.11%), Postives = 99/223 (44.39%), Query Frame = 3
Query:  351 HTNNVMAVGF-QCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRAA-VNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGCYLITASSDATARLWSMSPVENSECIKD 1013
            H++NV ++   +  G  + +G +D  V +W +  P C M        + ++ +   +  +++G Q+G+IRVWDL A      L+      + SL     GS V + +      +W + R          + K ++H   + +CL    F    ++LA+A+ DHTVK+W++    +     GH   V    F      L + SSD T R W +       CI++
Sbjct:   19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH-KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGC-------IFKYKSHTQAV-RCL---RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEE 229          
The following BLAST results are available for this feature:
BLAST of DY263005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
YQ95_SCHPO1.131e-1426.73Uncharacterized WD repeat-containing protein C18.0... [more]
TG125_CAEEL1.131e-1423.11WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
YCW2_YEAST1.477e-1426.88WD repeat-containing protein YCR072C OS=Saccharomy... [more]
GBLP_CHLRE1.929e-1425.17Guanine nucleotide-binding protein subunit beta-li... [more]
KTNB1_XENLA2.519e-1430.56Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
UTP13_SCHPO3.290e-1425.28Probable U3 small nucleolar RNA-associated protein... [more]
TBL3_HUMAN3.290e-1422.12Transducin beta-like protein 3 OS=Homo sapiens GN=... [more]
WDS_DROME4.297e-1422.97Protein will die slowly OS=Drosophila melanogaster... [more]
PRP4_BOVIN4.297e-1423.79U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos ... [more]
KTNB1_CHICK4.297e-1429.82Katanin p80 WD40-containing subunit B1 OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263005 ID=DY263005; Name=DY263005; organism=Citrus clementina; type=EST; length=1332bp
AGGTTCACTTCGCTTAGTTCATTATATGTGATCGCCCCCCGCGCCCGCCC
CCCCACCCCAAAAAAAAGCATTGATCCTCATTTCTATATACGAATTGAAT
CCGGCATTTGGAGTAGAATAAGATGGCACAGCCATCAGTGATACTCGCGA
CAGCTAGTTATGATAAGACAATCAAATTTTGGGAGGCCAAAAGCGGTCGC
TGCTACCGTACCATTCAATACCCTGATTCGCAAGTTAATCGGCTAGAGAT
AACTCCAAATAAACACTACCTGGCTGCTGCTGGTAATCCACATATTCGCT
TGTTTGATGTTACCTCAAGCAGCCCGCAGCCTGTGATGAGCTATGATCAG
CATACTAATAATGTTATGGCAGTGGGGTTTCAGTGTGATGGAAACTGGAT
GTATTCAGGTTCCGAGGATGGAACGGTAAAGATTTGGGATTTAAGGGCCC
CAGTTTGTCAAATGGAATACGAAAGTCGTGCTGCTGTTAACACTGTTGTA
TTGCACCCAAATCAGACTGAACTGATATCTGGCGACCAAAATGGGAATAT
TCGTGTGTGGGATTTGACAGCAAATTCTTGCAGTTGTGAACTGGTGCCAG
AGGTAGATACAGCTGTTAGGTCTTTAACAGTTATGTGGGACGGAAGCCTG
GTAGTTGCTGCTAATAACCATGGAACATGTTATGTTTGGCGCTTGATGCG
TGGGACTCAGACTATGACCAACTTTGAGCCACTTCATAAACTACAAGCAC
ATAATGGATACATCCTGAAATGTCTCCTTTCTCCGGAGTTTTGTGAACCC
CACAGATATCTGGCCACTGCATCTTCTGACCACACTGTCAAGATTTGGAA
TGTTGATGGTTTCACATTAGAAAAAACCTTGATAGGACATCAACGATGGG
TATGGGACTGTGTTTTCTCTGTAGATGGGTGCTATCTCATAACAGCCTCT
TCTGATGCGACAGCAAGACTATGGTCTATGTCACCGGTGGAGAACTCAGA
ATGTATCAAGGACCCACAAAGCAAAAATTTGTTGCCCTCTCATGAAGAAC
TTAACCCTCTGCTCCTTGACCAAAAACGGAAATCCCCTTGGATCAAGGGA
CCCCCTTGCAACATTATCTTCCCTTCCCGAAGGCCCCGAAACTGAAAAAA
TTGAACCAAAATTTTTTTTTGGCTTCCGGGGAATTTGAGGGCCAAAAAAA
AAATTTTGGGTGAAAAATTTTTATTCCAAAACTTAAGAAATTGGGACAAG
AATTTTGTTTTTTAAAAAACAAAAAAATTCAAAAAAAATTTCCCCTCTTT
TCCCCCTTTTAAAATAAGGTCTTTTTTTTTTG
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