DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SYNSC (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9605) GN=rlmN PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.784e-84
Identity = 168/346 (48.55%), Postives = 217/346 (62.72%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQS------TLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LLG S  ELQ  AV  GQ+ +RG+QLH  IY +  + + +    P+++R  L EAG  VGRL       A D T KLL+  ED   IETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E    R +++VFMGMGEP+LN  +VLEA RCLN D+ IGQR IT+STVGVP T+ +LA   +Q       TLA+SLHAPNQ+LRE ++P+A +YP +A+++DCR Y   T RRVSFEY LL G+NDQ              G   HVNLI +N I+  +++RP  + + AF   LE   + ++     G D  AACG LR +
Sbjct:    5 LLGRSAAELQDWAVAQGQKPFRGRQLHDWIYAKGARSLADITVFPKTWRAALVEAGVDVGRLKEVHHSVATDATTKLLLSTEDGETIETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLQTHEIVDQVLSVREAMDRRPSHIVFMGMGEPLLNSSAVLEAIRCLNDDLGIGQRRITVSTVGVPKTLPQLAELAMQRLGRAQFTLAVSLHAPNQRLREELIPTAHAYPYDALLEDCRHYLDVTGRRVSFEYILLGGLNDQPEHAAELADRVG--GFQSHVNLIAYNPIEEEEFKRPTPQRIEAFRRVLERRGVAVSLRASRGLDQNAACGQLRRQ 343          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROM4 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9211) GN=rlmN PE=3 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 2.331e-84
Identity = 167/347 (48.13%), Postives = 222/347 (63.98%), Query Frame = 3
Query:   57 VLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            VLLG +  +L+KLA + G+ ++RG+Q+H  +Y++ V+++E    LP+ +R  L + G   GRL   + + A DGT+KLL++  D   IE VGIP        RLT CVSSQVGC + C FCATGKGGF R+L  HEIV QVL+I E F  R +++VFMGMGEP+LN++SVLE+  CLN D+ IGQR IT+STVGV NT+ +LA        ++Q TLA+SLHAPNQ LRE +VPSAK YP++ ++ DCR Y   T RR+SFEY LLA VND+              G   HVNLI +N I   DYQRP    +  F   L+S  + ++     G D  AACG LR++
Sbjct:   12 VLLGQNVAKLEKLAQEYGEPAFRGRQIHEWLYQKGVRKLEEISVLPKLWRTTLSDQGVCTGRLEEVKRLVANDGTIKLLLETSDRESIEAVGIPTNS-----RLTTCVSSQVGCSMGCRFCATGKGGFQRSLEVHEIVDQVLSIREAFDRRPSHIVFMGMGEPLLNIESVLESISCLNNDLGIGQRRITVSTVGVVNTLPQLAELALAKLGRVQFTLALSLHAPNQHLREMLVPSAKVYPIQDLLSDCRHYLDITGRRISFEYILLATVNDKVEHAEELADLIS--GFQSHVNLIAYNPIDEEDYQRPSLARINRFMTVLQSRGVAVSLRASRGLDQDAACGQLRHQ 351          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SYNPX (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain WH8102) GN=rlmN PE=3 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 3.044e-84
Identity = 166/345 (48.12%), Postives = 217/345 (62.90%), Query Frame = 3
Query:   57 VLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKL------QSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            +LLG S  EL+  AV  GQ+ +RG+QLH  +Y +  + +     LP+++R  L+E G  VGRL       AAD T KLL+  +D   IETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E+   R +++VFMGMGEP+LN ++VL+A RCLN D+ IGQR IT+STVGVP T+ +LA   L      Q TLA+SLHAPNQ LRE ++P+A +YP EA+++DCR Y   T RRVSFEY LL G+ND               G   HVNLI +N I+  ++QRP +  +  F   LE   + ++     G D  AACG LR
Sbjct:    1 MLLGRSAAELESWAVAQGQKPFRGRQLHDWLYAKGARSLSEITVLPKAWRESLKEDGVEVGRLKEVHRSVAADATTKLLLSTDDGETIETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLRTHEIVDQVLSVREVMDRRPSHIVFMGMGEPLLNSQAVLDAIRCLNDDLGIGQRRITVSTVGVPKTLPQLAELALATLGRAQFTLAVSLHAPNQALREELIPTAHAYPYEALLEDCRHYLAVTGRRVSFEYILLGGLNDAPEHAAELADRVG--GFQSHVNLIAYNPIEEEEFQRPTRARIEGFQRVLERRGVAVSLRASRGLDQNAACGQLR 338          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SYNPW (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain WH7803) GN=rlmN PE=3 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 3.044e-84
Identity = 163/352 (46.31%), Postives = 223/352 (63.35%), Query Frame = 3
Query:   51 ANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  LLG+   EL++ AV  GQ ++RG+QLH  +Y +   ++++   LP+++R  LQ+ G  +GRL       A D T KLL+  +D   +ETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E+ + R ++VVFMGMGEP+LN+++VL+A RCLN D+ IGQR IT+STVGVP T+ +LA        + Q TLA+SLHAPNQ LRE ++P+A +YP +A++ DCR Y   T RRVSFEY LL G+ND               G   HVNLI +N I+  ++QRP +  +  F   LES  + ++     G D  AACG LR   +K
Sbjct:    7 SKTLLGLGASELERWAVSQGQSAFRGRQLHDWLYAKGACDLQDITVLPKAWRASLQDKGVIIGRLKEQDRKVAGDATTKLLLGTDDGETLETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLYTHEIVAQVLSVREVMERRPSHVVFMGMGEPLLNIEAVLDAIRCLNDDLGIGQRRITVSTVGVPRTLPRLAELAMERLGRAQFTLAVSLHAPNQSLREELIPTAHAYPYDALLDDCRHYLAITGRRVSFEYILLGGLNDHPAHAEELADRVG--GFQSHVNLIAYNPIEEEEFQRPTRDRIEGFRRVLESRGVAVSLRASRGLDQDAACGQLRRSRQK 351          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_TRIEI (Ribosomal RNA large subunit methyltransferase N OS=Trichodesmium erythraeum (strain IMS101) GN=rlmN PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 3.975e-84
Identity = 167/338 (49.41%), Postives = 221/338 (65.38%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            LLG+S  +L +     GQ +YRGKQL+  IY++  K + +     + +R ++  + + +GR  I     A D TVK L+KL D  +IETVGIP        RLT CVSSQVGCP+ C FCATGKGGFSRNL +HEI+ QVL ++E F+ RV+++VFMGMGEP+LN K+VL A R LN+D+ IGQR+ITIST G+ + I++LA +KLQ TLA+SLHA NQ+LRE ++PSAK YPL  ++ +CR+Y + T RR+SFEY LLA  ND               G   HVNLIP+N I   DYQRP ++ +  FA AL    I ++     G +A AACG LR
Sbjct:   13 LLGLSLAKLTEWVQQQGQPAYRGKQLYQWIYQKGAKSLADITVFSKQWREEI--SNFPIGRSVIHHRSVAPDATVKYLLKLSDGNIIETVGIPTYK-----RLTVCVSSQVGCPMACDFCATGKGGFSRNLEAHEIIDQVLTVQEDFERRVSHIVFMGMGEPLLNTKNVLAAVRSLNQDLGIGQRLITISTSGIRDRIRQLAQHKLQVTLAVSLHASNQRLREHLIPSAKFYPLADLISECREYVKITKRRISFEYILLASFNDLPDHARELAKNMR--GFQCHVNLIPYNPISEVDYQRPTQEMIKTFANALAEQNIAVSIRYSRGLEANAACGQLR 341          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_NOSP7 (Ribosomal RNA large subunit methyltransferase N OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rlmN PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 3.975e-84
Identity = 164/341 (48.09%), Postives = 222/341 (65.10%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGP---MRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            LLG S  EL       GQ +YRGKQLH  IY + V+ + +     + +R ++ E    +GR  +     A DGTVK L++L D ++IETVGIP   E+G     RLT CVS+QVGCP+ C FCATGKGG+ RNL+ HEI+ QVL ++E F+ RV+NVVFMG+GEP+LN ++VL A + LN+D+ IGQR +T+STVG+ + I++ A   LQ TLA+SLHAPNQ LRE ++PSA++YPLE ++ +CR+Y + T RRV+FEY LLAGVND               G   HVNLIP+N I+  DY+RP +  + AF   L+     ++     G +A AACG LR
Sbjct:   24 LLGASVAELSAWVQQQGQPAYRGKQLHEWIYDKGVRSLADISVFSKQWRAEVAEI--PIGRSTLHYRSVAPDGTVKYLLRLTDGQIIETVGIPTFAERGEGPKARLTVCVSTQVGCPMACDFCATGKGGYKRNLARHEIIDQVLTVQEDFQQRVSNVVFMGLGEPLLNTENVLAALKSLNQDIGIGQRSLTVSTVGIRDRIRQFAQNNLQITLAVSLHAPNQALREKLIPSARAYPLEELLAECREYVEITGRRVTFEYVLLAGVNDLPEHALELSKCMR--GFQSHVNLIPYNPIQEVDYKRPNRDRIEAFVNVLKQQNTAVSVRYSRGLEADAACGQLR 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_MICAN (Ribosomal RNA large subunit methyltransferase N OS=Microcystis aeruginosa (strain NIES-843) GN=rlmN PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 3.975e-84
Identity = 170/339 (50.15%), Postives = 218/339 (64.31%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRN 1076
            LL  S +EL     D GQ +YRGKQLH  +Y++ V  + +    PQ +R+ +  A + +GR  I     A D T K L+KL D  +IE VGIP E      RLT CVSSQVGCP+ C FCATGKGGF+RNL +HEIV QVL ++E F+ RV++VVFMGMGEP+LN+  V+ A  CLNKDV IGQR +TISTVG+P+ IK+LA + LQ T A+SLHA NQ++R  ++PSA  Y L  +++DC++Y Q T RRV+FEY LLAGVND               G   HVNLIP+N I+  DYQRP +K + AF   LE  K+ +      G    AACG LR+
Sbjct:    3 LLAKSLEELTDWVKDQGQPAYRGKQLHQWLYEKGVHSLADISVFPQEWRSKM--ADYPIGRSLIHYRSVAPDRTRKYLLKLADGLIIEAVGIPSEK-----RLTVCVSSQVGCPMACDFCATGKGGFTRNLKAHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLLNIPEVVTAIHCLNKDVGIGQRCLTISTVGLPHKIKQLAEHNLQITFAVSLHASNQQVRAKLIPSADHYLLSNLIQDCQEYVQITGRRVTFEYILLAGVNDLPEHARELAKLVK--GFQSHVNLIPYNPIQEVDYQRPDEKRIKAFKTILEQEKVAVTVRYSRGLATDAACGQLRS 332          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SYNP6 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rlmN PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 1.157e-83
Identity = 170/348 (48.85%), Postives = 221/348 (63.51%), Query Frame = 3
Query:   48 DANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYK------LQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            DA  LLG S  ELQ   V  GQ SYR KQL+  +Y+R +  +      P+++R  LQ     VGR  I     +  G++K L++L D  +IE VGIP  D     RLT CVSSQ+GC + C FCATGKGGF R+L+ HEI+ QVL ++E ++ RV+N+VFMGMGEP+LNL +VL A RCLN+D+ IGQR IT+STVG+P  I++LA  K      LQ TLA+SLHAPNQ +R+ ++PS++ YP+  ++++CRDY Q T RRV+FEY LLAG+NDQ              G   HVNLIP N I   +YQRP K  V AFA AL   ++ +      G  A AACG LR
Sbjct:    3 DATPLLGRSLPELQDWVVAQGQPSYRAKQLYQWLYERSIHNLAEISVFPKAWRQSLQAV--PVGRSQIVDRSVSPSGSIKYLLRLHDGEIIEAVGIPSGD-----RLTVCVSSQLGCAMACDFCATGKGGFRRHLAPHEIIDQVLTVQEDWQQRVSNIVFMGMGEPLLNLDAVLAAIRCLNQDIGIGQRGITVSTVGIPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIRDRLIPSSRHYPITDLLQECRDYVQITGRRVTFEYILLAGLNDQPEQAEQLAQLLR--GFQSHVNLIPCNPIDEVEYQRPSKARVDAFADALRQQRVAVTVRWSKGLGADAACGQLR 341          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROM1 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain NATL1A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 1.157e-83
Identity = 162/357 (45.38%), Postives = 230/357 (64.43%), Query Frame = 3
Query:   30 SRAPRVDANV-LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            ++ P++ +N  LLG+S ++L++ A   G++S+RG+Q+H  IY+R  K +++   LP+ +R+ L   G  +GRL     V A D T+KLL+   D  ++ETVGIP +      RLT CVSSQ+GCP+ C FCATGKGG +R+L  +EIV QV+++ E    R T+VVFMGMGEP+LN+++VL++  CL  D+ IGQR IT+STVG+PNT+  LA        ++Q TLA+SLHAPNQ LRE I+PSA SYP+ +++KDC+ Y   T RRVSFEY LL G+ND+              G   HVNLI +N I   +++RP +  V AF   LE+  + ++     G D  AACG LR +
Sbjct:    2 TKLPKLSSNSSLLGLSSEDLEEFARQEGEKSFRGRQIHEWIYQRGAKSLDSISVLPKKWRDSLVRKGIQIGRLDEINRVVAEDETLKLLMGTFDGEIVETVGIPTDK-----RLTVCVSSQIGCPMGCKFCATGKGGLNRSLDVNEIVDQVISVRETMNRRPTHVVFMGMGEPLLNIQNVLDSIECLTSDIGIGQRKITVSTVGIPNTLSDLAKLAQDRLGRVQFTLAVSLHAPNQTLRELIIPSASSYPINSLLKDCKKYIDLTGRRVSFEYILLGGLNDKDIHAEQLANLMR--GFQSHVNLIAYNPIAEENFKRPSQSRVNAFRELLENRGVAVSVRASRGRDKDAACGQLRRQ 351          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROMT (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain NATL2A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.511e-83
Identity = 161/357 (45.10%), Postives = 231/357 (64.71%), Query Frame = 3
Query:   30 SRAPRVDANV-LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            ++ P++ +N  LLG+S ++L++ A   G++S+RG+Q+H  IY+R  K +++   LP+ +R+ L   G  +GRL     V A D T+KLL+   D  ++ETVGIP +      RLT CVSSQ+GCP+ C FCATGKGG +R+L  +EIV QV+++ E    R T+VVFMGMGEP+LN+++VL++  CL  D+ IGQR IT+STVG+PNT+  LA        +++ TLA+SLHAPNQ LRE I+PSA SYP+ +++KDC+ Y + T RRVSFEY LL G+ND+              G   HVNLI +N I   +++RP +  V AF   LE+  + ++     G D  AACG LR +
Sbjct:    2 TKLPKLSSNSSLLGLSSEDLEEFARQEGEKSFRGRQIHEWIYQRGAKSLDSISVLPKKWRDSLVRKGIQIGRLDEINRVVAEDETLKLLMGTFDGEIVETVGIPTDK-----RLTVCVSSQIGCPMGCKFCATGKGGLNRSLDVNEIVDQVISVRETMNRRPTHVVFMGMGEPLLNIRNVLDSIECLTSDIGIGQRKITVSTVGIPNTLSDLAKLAQDRLGRVKFTLAVSLHAPNQTLRELIIPSASSYPINSLLKDCKKYIELTGRRVSFEYILLGGLNDKDIHAEQLANLMR--GFQSHVNLIAYNPIAEENFKRPSQSRVNAFRELLENRGVAVSVRASRGRDKDAACGQLRRQ 351          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_SYNSC1.784e-8448.55Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROM42.331e-8448.13Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_SYNPX3.044e-8448.12Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_SYNPW3.044e-8446.31Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_TRIEI3.975e-8449.41Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_NOSP73.975e-8448.09Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_MICAN3.975e-8450.15Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_SYNP61.157e-8348.85Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROM11.157e-8345.38Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROMT1.511e-8345.10Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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