DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRT1 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.093e-49
Identity = 126/351 (35.90%), Postives = 191/351 (54.42%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            + G++  EL   AV+ G++ +R  Q+   +YK++V+  E    + + F   L +  + V  L       + DGTVK L +L D  LIETV +     +    L+ CV++QVGC + C+FCA+G     R+L++ EIV Q++ +++ F       RV++VV MG+GEP  N  +VL   R +N D  + IG R IT+ST G+   IK+ A+  +Q  LA+SLHAPN  LR SI+   +S+PLE + +    Y Q T+RRV+FEY +L  VND                +  ++NLIP+N +   D Y R  K+ V AF   L+ + +     +  G D  AACG LR+   K
Sbjct:   28 IYGLTRDELIDWAVEHGEKKFRATQIWDWLYKKRVQSFEEMTNISKDFIAKLND-NFCVNPLKQRIVQESKDGTVKYLFELPDGMLIETVLM-----RQHYGLSVCVTTQVGCNIGCTFCASGLIKKQRDLTAGEIVAQIMLVQKYFDDRGDGERVSHVVVMGIGEPFDNYDNVLRFLRTINNDNGLAIGARHITVSTSGLAPKIKEFANEGVQVNLAVSLHAPNNDLRSSIMRINRSFPLEKLFEAIEYYIQTTNRRVTFEYIMLNEVNDHPENAQELADLTKKIRKLSYINLIPYNPVSEHDHYSRSTKERVAAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMK 372          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPD (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.093e-49
Identity = 126/351 (35.90%), Postives = 195/351 (55.56%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL + AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIEWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_MARAV (Ribosomal RNA large subunit methyltransferase N OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.093e-49
Identity = 124/347 (35.73%), Postives = 186/347 (53.60%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF------KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQE--TSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            LLGM + +L+     LG++ +R +Q+   +++R V + +    + +S R  L+E     G   ++   T+ DGT K ++++++   +ETV IP + E+G    T CVSSQ+GC L C+FC+TGK GF+RNL++ EI+GQV      F         +TNVV MGMGEP+LN ++V++A   + +D+  G  +R +T+ST GV   + +L       +LAISLHAPN +LR  +VP  K YP+  ++   R Y       R+ + EY ++ GVNDQ              G    +NLIPFN    SD++RP   A   F   L             G D  AACG L
Sbjct:   10 LLGMPKAKLEAFFETLGEKRFRAQQVLQWMHQRGVDDFDQMTNMSKSLREQLKEVAEIRGPEVVYDE-TSKDGTRKWVMRMDNGNSVETVLIP-DGERG----TLCVSSQIGCSLDCTFCSTGKRGFNRNLTAAEIIGQVWVARRAFMPFDPNDRPITNVVMMGMGEPLLNFENVVDAMNLMMEDLAYGISKRRVTLSTSGVVPALDRLGEV-TDVSLAISLHAPNDELRNQLVPLNKKYPIAELLAATRRYLSRLPDKRKATIEYTVIEGVNDQPEHARELVVLLK--GLPCKINLIPFNPFPESDFRRPSMNATRRFQTVLNEAGYVTTIRTTRGDDIDAACGQL 347          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CHLPD (Ribosomal RNA large subunit methyltransferase N OS=Chlorobium phaeobacteroides (strain DSM 266) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.093e-49
Identity = 126/348 (36.21%), Postives = 189/348 (54.31%), Query Frame = 3
Query:   69 MSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTV----TAAD--GTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD---VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            +S QEL++   +LG+ +YR +Q+H  I+  +    E    +    RN L +  + +G  PI        +A D   TVKLL++L+DN  IETV IP E+     R+TACVSSQVGCPL+C FCA+G+ GF RNLS+ EI+ QV ++ +  +     + +TN+VFMGMGEP+LN +++ E+   L+       + QR ITISTVG+   I +L    L++ LAISLH+ +Q+ RES++P A  + L  + K   +Y  +T   V+  Y LL G+ND              +     +NLI +N I    ++  + +    F   +    I +   K  G    AACG L
Sbjct:   11 LSRQELRQAIANLGEPAYRTRQIHQWIFSHRAATFEEMTTISLELRNKLADQ-FRIG-FPILADCQQDGSANDPFSTVKLLLELDDNEKIETVLIPSEN-----RMTACVSSQVGCPLQCRFCASGQTGFKRNLSADEIIDQVFSLNDFIRTKHESNEITNIVFMGMGEPLLNFENLKESIEVLSDQSYKFNLPQRKITISTVGIIPGINELGKSGLKTKLAISLHSASQETRESLIPVASEFSLTQLRKTLSEYTSQTGEPVTLVYMLLKGINDSVEDARLLVKFSRSF--LCKINLIDYNSIINMKFKPVFNETKDMFIQHILDAGIHVTVRKSHGASINAACGQL 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_BACSU (Ribosomal RNA large subunit methyltransferase N OS=Bacillus subtilis GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.427e-49
Identity = 121/342 (35.38%), Postives = 184/342 (53.80%), Query Frame = 3
Query:   81 ELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKH---RVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            E+++   D G++ +R  Q+   +Y+++V   E+   L +  R  L    + +  L      T+ DGT+K L +L D   IETV   +  E G    + CV++QVGC + C+FCA+  GG  RNL + EIV QV+ +++       RV++VV MG+GEP  N   +L   + +N D  + IG R IT+ST G+   I + A  ++Q   AISLHAPN ++R  ++P  ++Y L  +M+  + Y  +T RR+SFEY L  GVNDQ              G   HVNLIP N +   DY R  +  + AF   L+S  + +   +  G D  AACG LR + R++
Sbjct:   27 EIKQWLTDNGEKPFRAAQIFEWLYEKRVSSFEDMTNLSKDLREKLNTR-FVLTTLKTAVKQTSQDGTMKFLFELHDGYTIETV--LMRHEYGN---SVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVKVQKALDETDERVSSVVIMGIGEPFDNFNEMLAFLKIINHDKGLNIGARHITVSTSGIIPKIYEFADQQMQINFAISLHAPNTEIRSRLMPINRAYKLPDLMEAVKYYINKTGRRISFEYGLFGGVNDQVEHAEELADLLE--GVKCHVNLIPVNYVPERDYVRTPRDQIFAFEKTLKSRGVNVTIRREQGHDIDAACGQLRAKERQD 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPZ (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.864e-49
Identity = 126/351 (35.90%), Postives = 194/351 (55.27%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPM (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M28 GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.864e-49
Identity = 126/351 (35.90%), Postives = 194/351 (55.27%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPF (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.864e-49
Identity = 126/351 (35.90%), Postives = 194/351 (55.27%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRP3 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M3 GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.864e-49
Identity = 126/351 (35.90%), Postives = 194/351 (55.27%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRP1 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M1 GN=rlmN PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.864e-49
Identity = 126/351 (35.90%), Postives = 194/351 (55.27%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_STRT11.093e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRPD1.093e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_MARAV1.093e-4935.73Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CHLPD1.093e-4936.21Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_BACSU1.427e-4935.38Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRPZ1.864e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRPM1.864e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRPF1.864e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRP31.864e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRP11.864e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
back to top