DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPC (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 125/351 (35.61%), Postives = 193/351 (54.99%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR  I+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSRIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSLKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRPB (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 125/351 (35.61%), Postives = 193/351 (54.99%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F + L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR  I+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVSILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSRIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSLKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STRP8 (Ribosomal RNA large subunit methyltransferase N OS=Streptococcus pyogenes serotype M18 GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 126/351 (35.90%), Postives = 193/351 (54.99%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK-----HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSD-YQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +  ++  EL   AV+ GQ+ +R  Q+   +YK++V+  E    + + F   L ++ + V  L       +ADGTVK L +L D  LIETV +     +     + CV++QVGC + C+FCA+G     R+L+S EI  Q++ +++ F       RV++VV MG+GEP  N K+V+   R +N D  + IG R IT+ST G+ + I+  A+  +Q  LA+SLHAPN  LR SI+   +S+PLE +      Y ++T+RRV+FEY +L  VND                +  +VNLIP+N +   D Y R  K+ VLAF   L+ + +     +  G D  AACG LR++  K
Sbjct:    5 IYSLTRDELIAWAVERGQKQFRATQIWDWLYKKRVQSFEEMTNISKDFVPILNDS-FCVNPLKQRVVQESADGTVKYLFELPDGMLIETVLM-----RQHYGHSVCVTTQVGCNIGCTFCASGLIKKQRDLNSGEITAQIMLVQKYFDDRKQGERVSHVVVMGIGEPFDNYKNVMCFLRVINDDNGLAIGARHITVSTSGLAHKIRDFANEGVQVNLAVSLHAPNNDLRSSIMRVNRSFPLEKLFSAIEYYIEKTNRRVTFEYIMLNEVNDSIKQAQELADLTKTIRKLSYVNLIPYNPVSEHDQYSRSPKERVLAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSKTMK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAT (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAR (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain MRSA252) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAN (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain N315) GN=rlmN PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAM (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rlmN PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAE (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain Newman) GN=rlmN PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAAC (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain COL) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_STAA9 (Ribosomal RNA large subunit methyltransferase N OS=Staphylococcus aureus (strain JH9) GN=rlmN PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.152e-49
Identity = 120/355 (33.80%), Postives = 187/355 (52.68%), Query Frame = 3
Query:   39 PRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            P  D   +  +   E+Q   V+ GQQ +R KQ+   +Y+++V  I+    L +  R  L++  +TV  L       + DGT+K L +L+D   IETV +     +     + CV++QVGC + C+FCA+  GG  RNL + EIV QVL +++     + RV+ +V MG+GEP  N   +++  R +N D  + IG R IT+ST G+   I   A   +Q   A+SLHA   ++R  ++P  ++Y +E +++  + Y ++T+RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y +  K  +  F   L+   I     +  G D  AACG LR + R+
Sbjct:   14 PNFDKQSIYSLRFDEMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKD-NFTVTTLTTVVKQESKDGTIKFLFELQDGYTIETVLM-----RHDYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVSQVLTVQKALDATEERVSQIVIMGIGEPFENYDEMMDFLRIVNDDNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEKLIEAIQYYQEKTNRRVTFEYGLFGGVNDQLEHARELAHLIK--GLNCHVNLIPVNHVPERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQLRAKERQ 360          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_STRPC4.152e-4935.61Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRPB4.152e-4935.61Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STRP84.152e-4935.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAT4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAR4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAN4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAM4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAE4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAAC4.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_STAA94.152e-4933.80Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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