DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_ANAVT (Ribosomal RNA large subunit methyltransferase N OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rlmN PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 3.365e-83
Identity = 167/350 (47.71%), Postives = 221/350 (63.14%), Query Frame = 3
Query:   30 SRAPRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            S  P+     LLG S  EL       GQ +YRGKQLH  IY + V+ + +     + +R  + +    +GR  I     A+DGTVK L++L D  ++ETVGIP +      RLT CVS+QVGCP+ C FCATGKGG+ RNL  HEIV QVL ++E F+ RV++VVFMGMGEP+LN ++VL A R LN+DV IGQR +T+STVG+ + I +LA + LQ TLA+SLHAPNQ LRE ++PSA+SY +E ++ +CR+Y   T RR+SFEY LLAGVND               G  +HVNLIP+N I   DY+RP    + AF   L+   I ++     G +A AACG LR +
Sbjct:   12 SSQPQQPCLPLLGASVTELTSWVQQQGQPAYRGKQLHDWIYHKGVRSLTDISVFSKQWRAAVADV--PIGRSTIHHRSVASDGTVKYLLQLSDGEIVETVGIPTDK-----RLTVCVSTQVGCPMACDFCATGKGGYKRNLERHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLLNTENVLAALRSLNQDVGIGQRSLTLSTVGIRDRISQLAEHHLQVTLAVSLHAPNQALREQLIPSARSYHIEDLLAECREYVAITGRRISFEYILLAGVNDLPEHALELSKHLR--GFQNHVNLIPYNPISEVDYKRPSGDRIQAFLTVLQQQHIAVSVRYSRGLEADAACGQLRTK 352          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SYNS9 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9902) GN=rlmN PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.279e-82
Identity = 162/348 (46.55%), Postives = 217/348 (62.36%), Query Frame = 3
Query:   54 NVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            NVLLG S  EL+  AV  G +S+RG+Q+H  +Y + VK +     LP+ +R +L+   + VGRL +     AAD T KLL+  +D   IETVGIP +      RLT C+SSQVGCP+ C FCATGK G  R+L++HEIV QVL++ E    R ++VVFMGMGEP+LN ++VLE  RCLN D+ IGQR IT+STVGVP T+ +LA        + Q TLA+SLHAPNQ+LRE ++P+A +YP + ++ DCR Y   T RRVSFEY LL  +ND               G   HVNLI +N I+  +++RP  + + AF   LE   + ++     G D  AACG LR +
Sbjct:    3 NVLLGRSAAELEDWAVAQGHKSFRGRQIHDWLYNKGVKSLSEISALPKQWRTELEAQTFRVGRLKLVHQSVAADATTKLLLATDDGETIETVGIPTDQ-----RLTVCISSQVGCPMACRFCATGKSGLQRSLATHEIVDQVLSVREAMDRRPSHVVFMGMGEPLLNSEAVLETIRCLNTDLGIGQRRITVSTVGVPKTLPQLAELAMEKLGRAQFTLAVSLHAPNQQLREELIPTAHAYPYDDLLDDCRHYLDLTGRRVSFEYILLGELNDHPEHAAELADRVG--GFQSHVNLIAYNPIEEEEFKRPTSQRIEAFRRVLERRGVAVSLRASRGLDQNAACGQLRRQ 343          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CYAP8 (Ribosomal RNA large subunit methyltransferase N OS=Cyanothece sp. (strain PCC 8801) GN=rlmN PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.279e-82
Identity = 165/343 (48.10%), Postives = 218/343 (63.56%), Query Frame = 3
Query:   45 VDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            V    LLG S  EL +     GQ +YRGKQLH  +Y++  + ++     P+++R  L    + +GR  I     A D T K L+ L D  +IETVGIP        RLT CVSSQVGCP+ C FCATGKGG+ R+L +HEIV QVL ++E F+ RV++VVFMGMGEP+LNL+ V+++ + LN+D+ IGQR +TISTVG+P  I +LA + LQ TLA+SLHA NQ LRE+++PSA+ Y L+ ++ DCR+Y   T RR+SFEY LL GVND               G   HVNLIP+N I  +DYQRP +  +  F   LE HKI ++     G +A AACG LR
Sbjct:    3 VTEETLLGKSLDELTQWVEKQGQPTYRGKQLHQWLYEKGARSLDEISVFPKTWREKL--INYPIGRSTIDYRTVAPDATRKYLLCLGDGLIIETVGIPTAK-----RLTVCVSSQVGCPMACDFCATGKGGYQRHLRAHEIVDQVLTVQEDFQRRVSHVVFMGMGEPLLNLEEVVKSVKILNQDIGIGQRSLTISTVGLPQKIIQLAHHHLQVTLAVSLHASNQPLRETLIPSAQHYTLKNLLADCREYVNITGRRISFEYVLLGGVNDLPEQAIELANLLK--GFQSHVNLIPYNPIDEADYQRPNQTQIQTFVQVLEQHKIAVSVRYSRGLEANAACGQLR 336          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_ANASP (Ribosomal RNA large subunit methyltransferase N OS=Anabaena sp. (strain PCC 7120) GN=rlmN PE=3 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 1.279e-82
Identity = 165/350 (47.14%), Postives = 220/350 (62.86%), Query Frame = 3
Query:   30 SRAPRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            S  P+   + LLG S  EL       GQ +YRGKQLH  IY + V+ + +     + +R  + +    +GR  I     A+DGTVK L++L D  ++E VGIP +      RLT CVS+QVGCP+ C FCATGKGG+ RNL  HEIV QVL ++E F+ RV++VVFMGMGEP+LN ++VL   R LN+DV IGQR +T+STVG+ + I +LA + LQ TLA+SLHAPNQ LRE ++PSA+SY +E ++ +CR+Y   T RR+SFEY LLAGVND               G  +HVNLIP+N I   DY+RP    + AF   L+   I ++     G +A AACG LR +
Sbjct:   12 SSQPQQPCSPLLGASVTELTSWVQQQGQPAYRGKQLHDWIYHKGVRSLTDISVFSKQWRAAVADV--PIGRSTIHHRSVASDGTVKYLLQLSDGEIVEAVGIPTDK-----RLTVCVSTQVGCPMACDFCATGKGGYKRNLERHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLLNTENVLAGLRSLNQDVGIGQRSLTLSTVGIRDRISELAEHHLQVTLAVSLHAPNQALREQLIPSARSYHIEDLLAECREYVAITGRRISFEYILLAGVNDLPEHALELSKHLR--GFQNHVNLIPYNSIDEVDYKRPSGDRIQAFLTVLQQQHIAVSVRYSRGLEADAACGQLRTK 352          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROMA (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus GN=rlmN PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.414e-81
Identity = 163/345 (47.25%), Postives = 219/345 (63.48%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKL------QSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRN 1076
            LLG+   +L++LA+D G+  YRG+QLH  +Y++ V  +++   LP+++RN L + G +VG L       A D T+KLL+   D  +IETVGIP  +     RLT CVSSQ+GCP+ C FCATGK G  R+L  +EIV QV A+++ F    +NVVFMGMGEP+LN++ VL +  CLNKD+ IGQR IT+STVGV NT+ +LA   L      Q TLA+SLHAPNQKLRES++PSA++YP++ +++DCR Y   T RRVSFEY LL  +ND               G   HVNLI +N I G  +QRP  + V  F   L+   I ++     G D  AACG LR+
Sbjct:    8 LLGLDLSQLERLALDHGESLYRGRQLHQWLYQKGVDNLDDITVLPKAWRNSLIQKGISVGGLVEVNRFIAGDRTIKLLLSTGDGEIIETVGIPSGN-----RLTICVSSQIGCPMGCQFCATGKDGLKRSLKVNEIVAQVFAVKKAFNRSPSNVVFMGMGEPLLNIEEVLSSICCLNKDLGIGQRRITVSTVGVKNTLPQLAELALQFLGSVQFTLALSLHAPNQKLRESLIPSAQNYPIKLLLEDCRHYLDLTGRRVSFEYILLGHLNDHIEHAEELADLVG--GFQSHVNLIAYNPIDGESFQRPSNQRVNIFIKTLQKRGIVVSLRASRGLDKNAACGQLRS 345          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROMM (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9313) GN=rlmN PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 1.563e-80
Identity = 162/346 (46.82%), Postives = 214/346 (61.85%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LLG S  EL+  AV  GQ ++RG+QLH  +Y +  +  E    LP+S+R  LQ+ G T+GRL       A D T KLL+   D   IE+VGIP +      RLT C+SSQVGCP+ C FCA+GKGG  R+L++HEIV QVL++ E    R ++VVFMGMGEP+LN+++VL A RCLN D+ I QR IT+STVGVP+T+  LA        + Q TLA+SLHAPNQ+LRE ++P+A +YP E +++DCR Y   T RRV+FEY LL  +NDQ              G   HVNLI +N I    +QRP  + + AF   LE   + ++     G D  AACG LR +
Sbjct:   13 LLGCSATELEGWAVAEGQPAFRGRQLHEWLYAKGARSFEAITVLPKSWRLSLQQRGITIGRLLEVNRAVAVDDTTKLLLATVDGETIESVGIPTQQ-----RLTVCLSSQVGCPMACRFCASGKGGLQRSLATHEIVDQVLSLREAMDRRPSHVVFMGMGEPLLNIEAVLAAIRCLNIDLGIAQRRITVSTVGVPHTLPHLAELAMKRLGRAQFTLAVSLHAPNQELRERLIPTACAYPFETLLQDCRHYLAVTGRRVTFEYILLGALNDQPQHAEELADRVR--GFQSHVNLIAYNPIDDEGFQRPNPETIEAFRRVLEQRGVAVSLRASRGLDQNAACGQLRRQ 351          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROM3 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9303) GN=rlmN PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.667e-80
Identity = 160/346 (46.24%), Postives = 215/346 (62.14%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASY------KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LLG S  EL+  AV  GQ ++RG+QLH  +Y +  +  +    LP+S+R  LQ+ G T+GRL       A D T KLL+   D   IE+VGIP +      RLT C+SSQVGCP+ C FCA+GKGG  R+L++HEIV QVL++ E    R ++VVFMGMGEP+LN+++VL + RCLN D+ I QR IT+STVGVP+T+ +LA        + Q TLA+SLHAPNQ+LRE ++P+A +YP E +++DCR Y   T RRV+FEY LL  +NDQ              G   HVNLI +N I    +QRP  + + AF   LE   + ++     G D  AACG LR +
Sbjct:   13 LLGCSATELESWAVAEGQPAFRGRQLHDWLYAKGARSFDAITVLPKSWRISLQQRGLTIGRLLEVNRAVAVDDTTKLLLATVDGETIESVGIPTQQ-----RLTVCLSSQVGCPMACRFCASGKGGLQRSLATHEIVDQVLSLREAMDRRPSHVVFMGMGEPLLNIEAVLASIRCLNIDLGIAQRRITVSTVGVPHTLPQLAELAMKRLGRAQFTLAVSLHAPNQELRERLIPTACAYPFETLLQDCRHYLAVTGRRVTFEYILLGALNDQPQHAEELAERVR--GFQSHVNLIAYNPIDDEGFQRPNPETIEAFRRVLEQRGVAVSLRASRGLDQNAACGQLRRQ 351          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROM2 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9215) GN=rlmN PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 2.948e-79
Identity = 162/346 (46.82%), Postives = 221/346 (63.87%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIY--KRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKL------QSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            LLG S ++L+ +A++ GQ ++RG+Q+H+ IY  + K K I+    LP  FR  L++ G+ +  L +     A DGT+KLL+   DN  IE VGIP E      RLTAC+SSQVGCP+ C FCATGK G  R+L + EI+ Q+L IE     +VTN+VFMGMGEP+LN+  +L + R +NKD QI QR IT+STV VP  I KL++         Q TLAISLHA NQK+RE+I+PSAK+Y +E I++DC+ Y ++T RRVSFEY +L+GVND+              G   HVNLI +NQI   ++QR   K++ +F + L  + I ++  K  G D  AACG LR
Sbjct:    4 LLGSSVKDLENVALEYGQAAFRGRQIHNWIYNYRNKKKSIDQIEALPLDFRKKLKDDGFKLSELSVQERNLANDGTLKLLLSANDNESIECVGIPTEK-----RLTACLSSQVGCPMDCKFCATGKEGLKRSLKASEILDQILFIENEMNRKVTNIVFMGMGEPLLNIDDLLVSIRSINKDFQISQRKITVSTVAVPKMINKLSAKSFQILGNCQFTLAISLHASNQKIRETIIPSAKNYEIENIIEDCKQYVRDTGRRVSFEYLMLSGVNDKLEHANELSNLLR--GFQCHVNLIQYNQIDEVEFQRTSLKSLQSFQSRLSHNGIAVSLRKSRGLDKNAACGQLR 342          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROM0 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9301) GN=rlmN PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 3.850e-79
Identity = 165/350 (47.14%), Postives = 224/350 (64.00%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIY--KRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLA--SYKL----QSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFR 1085
            LLG + ++L+ +A+D GQ  +RG+Q+++ IY  + K K I+    LP  FR  L++ G+ V  L I     A DGT+KLL+  EDN  IE VGIP E      RLTAC+SSQVGCP+ C FCATGK G  R+L   EI+ Q+L IE     +VTN+VFMGMGEP+LN+  +L + R +N+D++I QR IT+STV VP  I KL+  S+K+    Q TLA+SLHAPNQK+RE+I+PSAK+Y +E I++DC+ Y ++T RRVSFEY +L GVND+              G   HVNLI +NQI   ++QR   K + +F + L  + I ++  K  G D  AACG LR   R
Sbjct:    4 LLGSTIKDLENVALDYGQAGFRGRQIYNWIYNYRNKKKNIDQIEVLPLDFRKRLKDDGFKVSDLSIHERNLANDGTLKLLLSTEDNESIECVGIPTEK-----RLTACLSSQVGCPMDCKFCATGKEGLKRSLKVSEILDQILFIENEMNRKVTNIVFMGMGEPLLNIDDLLLSIRSINEDLKISQRKITVSTVAVPKMINKLSAKSFKILGNCQFTLAVSLHAPNQKIRETIIPSAKNYEIENIIEDCKQYVRDTGRRVSFEYLMLRGVNDKIEHANELSHLLK--GFQCHVNLIQYNQIDEVEFQRACLKDLQSFQSRLSHNGIAVSLRKSRGLDKNAACGQLRQNAR 346          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_PROMS (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain AS9601) GN=rlmN PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 2.336e-76
Identity = 162/346 (46.82%), Postives = 217/346 (62.72%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIY--KRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIGQRMITISTVGVPNTIKKLASYKL------QSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            LLG S  +L+ +A+D GQ ++RG+Q+++ IY  + K K I+    LP  FR  L+  G+ V  L I     A DGT+KLL+  EDN  IE VGIP E      RLTAC+SSQVGCP+ C FCATGK G  R+L + EI+ Q+L IE     +VTN+VFMGMGEP+LN+  +L + R +N D QI QR IT+STV +P  I KL++         Q TLAISLHA NQK RE+I+PSAK+Y ++ I++DC+ + +ET RRVSFEY +L+GVND+              G   HVNLI +NQI   ++QR   K +  F + L ++ I ++  K  G D  AACG LR
Sbjct:    4 LLGSSINDLENVALDYGQAAFRGRQIYNWIYNYRNKNKNIDQIEVLPLDFREKLKVDGFKVSELVIKERNLANDGTLKLLLSTEDNESIECVGIPTEK-----RLTACLSSQVGCPMDCKFCATGKEGLKRSLKASEILDQILFIEYEMNRKVTNIVFMGMGEPLLNIDELLLSIRSINNDFQISQRKITVSTVAIPKMISKLSAKSFQILSNCQFTLAISLHASNQKTRETIIPSAKNYEIKNIIEDCKTFVRETGRRVSFEYLMLSGVNDKLEHACELSNLLK--GFQCHVNLIQYNQIDEVEFQRTSLKNLQLFQSRLVNNGIAVSLRKSRGLDKNAACGQLR 342          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_ANAVT3.365e-8347.71Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_SYNS91.279e-8246.55Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CYAP81.279e-8248.10Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_ANASP1.279e-8247.14Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROMA1.414e-8147.25Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROMM1.563e-8046.82Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROM32.667e-8046.24Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROM22.948e-7946.82Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROM03.850e-7947.14Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_PROMS2.336e-7646.82Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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