DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_VIBHB (Ribosomal RNA large subunit methyltransferase N OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 117/340 (34.41%), Postives = 175/340 (51.47%), Query Frame = 3
Query:   87 QKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAI-------EEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSR---RVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            Q  A +LG++++R  Q+   IY   V + +N   + +  R  LQ     +    +     ++DGT+K  +K+ D   +ETV IP +D     R T CVSSQVGC L C FC+T + GF+RNL   EI+GQV          +E  +  +TNVV MGMGEP+LN+K+++ A   +  D+  G  +R +T+ST GV + + ++   K+   LAISLHAPN +LR  I+P    + ++  +   R Y   ++    +V+ EY LL  VND                    +NLIPFN   GS Y++P    +  F   L  ++  +   K  G D  AACG L
Sbjct:   18 QFFADELGEKAFRADQVMKWIYHFGVDDFDNMTNINKKLREKLQHK-CEIKAPTVAEAQHSSDGTIKWAMKVGDQD-VETVYIPEDD-----RATLCVSSQVGCALECKFCSTAQQGFNRNLKVSEIIGQVWRAAREIGLQKETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRRVTVSTSGVVSGLDQMTG-KIDVALAISLHAPNDELRSQIMPINDRWDIQDFLASVRRYIASSNANRGKVTVEYVLLDHVNDDMDHARELAELMK--DTPCKINLIPFNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTVRKTRGDDIDAACGQL 347          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_SOLUE (Ribosomal RNA large subunit methyltransferase N OS=Solibacter usitatus (strain Ellin6076) GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 121/344 (35.17%), Postives = 175/344 (50.87%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVT----NVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            L+GM   +L++ A+   Q  YR KQ++  IY+ +   +     LP   R DL  A   VG   I     + DGT + L+KLED R +ETV +P  +     R T C+SSQVGCP+ C FC T   G  R+L++ EIVGQVL +    + R      N+V MG GEP+LNL++V++A R L      G   R +T+ST G+   I +L    ++  LAISL+A  ++ R+ ++P  + Y L+ ++  C+ Y      +++FEY LL GVND                    VNLI  N   G  Y  P  + V +F   +    +P    K  G D  AACG L+
Sbjct:   19 LVGMDLTDLRE-ALGSDQPGYRAKQIYEAIYRGQAANLVQISTLPAQLREDLA-ARHEVGLPEIAHLYQSTDGTRRYLLKLEDGRTVETVLMPDGE-----RDTICISSQVGCPVDCKFCMTALMGLERSLTAGEIVGQVLLVARENQLRQDGGRLNIVMMGQGEPLLNLENVVKATRILLDPAGFGLSPRRVTVSTAGIIPKIAELGREPVRPKLAISLNASTEESRQELMPITRKYHLKDLLAACKAYPLRPWEKLTFEYVLLRGVNDTDADARRVVKLLS--NLNAKVNLIALNPGPGIPYATPDPERVASFQNIVR-RALPCFVRKPRGLDIYAACGQLK 352          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_NEIMF (Ribosomal RNA large subunit methyltransferase N OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 118/350 (33.71%), Postives = 181/350 (51.71%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQE-AGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQV------LAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRR-VSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LL    Q L +   D+G++ +R KQ+   +++   +       L +S R+ L E AG  + +L + +   ++DGT K L+ +     +ETV IP  D     R T C+SSQVGC L C+FC+TG+ GF+RNL++ EI+GQ+      + +    +  ++NVV MGMGEPM N  +V+ A   +  D   G  +R +T+ST G+   + +L    +   LA+SLHA N ++R  IVP  K YPL+ +M  C+ Y  +  R  ++FEY +L G+ND+                    NLIPFN    S Y+R   + +  F   L+     +   K  G D  AACG L  +
Sbjct:    5 LLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQK--SSDGTRKWLLDVGTGNGVETVFIPESD-----RGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDV-MPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHARELIELVK--DVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQ 344          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_NEIMA (Ribosomal RNA large subunit methyltransferase N OS=Neisseria meningitidis serogroup A GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 118/350 (33.71%), Postives = 181/350 (51.71%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQE-AGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQV------LAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRR-VSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LL    Q L +   D+G++ +R KQ+   +++   +       L +S R+ L E AG  + +L + +   ++DGT K L+ +     +ETV IP  D     R T C+SSQVGC L C+FC+TG+ GF+RNL++ EI+GQ+      + +    +  ++NVV MGMGEPM N  +V+ A   +  D   G  +R +T+ST G+   + +L    +   LA+SLHA N ++R  IVP  K YPL+ +M  C+ Y  +  R  ++FEY +L G+ND+                    NLIPFN    S Y+R   + +  F   L+     +   K  G D  AACG L  +
Sbjct:    5 LLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNEMTDLAKSLRHKLNEQAGIEIPKLMMSQK--SSDGTRKWLLDVGTGNGVETVFIPESD-----RGTLCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVMMGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDV-MPVALAVSLHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHARELIELVT--DVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDIDAACGQLAGQ 344          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_MYCGI (Ribosomal RNA large subunit methyltransferase N OS=Mycobacterium gilvum (strain PYR-GCK) GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 121/344 (35.17%), Postives = 173/344 (50.29%), Query Frame = 3
Query:   69 MSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADG-TVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQV-LAIEEIFKH---RVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQ----IGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQ-XXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            +++ E      DLG  ++RGKQL +  + R + +      LP   R+ +  A +    L   R +    G T K+L +  D    E+V +     + P R T C+SSQ GC + C FCATG+GG  RNLS+ EI+ QV  A  E+      R++N+VFMGMGEP+ N   V+ A R +         I  R +T+STVG+   I+KLA  KL  TLA+SLH P+ +LR+++VP    + ++ ++   R Y   T RRVS EYAL+  VNDQ               G   HVNLIP N   GS++    K     F   + +  +        G +  AACG L
Sbjct:   24 LADTERAAAVADLGLPAFRGKQLANQYFGRLISDPSQMTDLPAGVRDQVGAALFPE-LLEAAREIECDRGETRKVLWRAVDKTTFESVLM-----RYPDRNTVCISSQAGCGMACPFCATGQGGLKRNLSTAEILEQVRFASAELRDREGGRLSNIVFMGMGEPLANYNRVVAAVRRITASSPHGFGISARSVTVSTVGLAPAIRKLADEKLNVTLAVSLHTPDDELRDTLVPVNNRWKVDEVLDAARYYADLTGRRVSIEYALIRDVNDQPWRADLLGRKLHATLGPLVHVNLIPLNPTPGSEWDASPKPVEREFVRRVRAKGVSCTVRDTRGREIAAACGQL 361          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_BRAJA (Ribosomal RNA large subunit methyltransferase N OS=Bradyrhizobium japonicum GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 131/368 (35.60%), Postives = 188/368 (51.09%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLG----QQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKL------EDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVL---------AIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCL--NKDVQIGQRMITISTVG-VPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDY-FQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHH--VNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            L+G+S  EL     ++G    Q+  R +QL H +Y R  +  +    + +  R +L +  +TV R  +     + DGT K L++L      E    +E V IP  D     R T CVSSQVGC L CSFC TG     RNL++ EIVGQV+         A  E    RVTN+V MGMGEP+ N  +V +A   +  N+ + I +R IT+ST G VPN ++  A  ++   LAISLHA   +LR  +VP  + YP++ +++ CRDY     +RR++FEY +L GVND                +G H  +NLIPFN   G+ Y+      +  F+  + +           G D  AACG L++E  K
Sbjct:   29 LIGLSRNELADRLGEIGVAPAQRKMRVQQLWHWMYFRGAQNFDEMTSISKGIRAELAQH-FTVDRPEVVAEQISNDGTRKWLLRLPSGDNVEKAHEVECVYIPETD-----RGTLCVSSQVGCTLNCSFCHTGTQRLVRNLTAGEIVGQVMVARDRLNDWADREDGTRRVTNIVMMGMGEPLYNFDAVRDALLIVGDNEGIGISRRRITLSTSGVVPNIVR--AGEEIGVMLAISLHAVRDELRNELVPLNRKYPIKELLQACRDYPGASNARRITFEYVMLKGVNDSLDDAKLLVKLL----KGIHAKINLIPFNPWPGTAYECSDWDQIEKFSEYIFNAGYSSPVRTPRGRDILAACGQLKSETEK 384          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_BACTN (Ribosomal RNA large subunit methyltransferase N OS=Bacteroides thetaiotaomicron GN=rlmN PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 7.585e-43
Identity = 116/339 (34.22%), Postives = 177/339 (52.21%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQI--GQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            LLGM+  ELQ L   LG   +  KQ+   +Y +KV  I+    L   +R +L +  + VG       + + DGTVK L  + +N  +E+V IP +DE    R T C+SSQVGC + C FC TGK G+S NL++H+I+ Q+ ++ E  + ++TNVV MGMGEP+ NL+ VL+A   L          + IT+STVG+   +++    +    LAISLH+P    R  ++P+ K++ +  +++  ++Y     RR+SFEY +  G+ND               G    +NLI F+ I G   +      +  F   L +H +        G D  AACG L
Sbjct:    7 LLGMTLIELQSLVKRLGMPGFAAKQIASWLYDKKVTSIDEMTNLSLKYR-ELLKQNYEVGAEAPVEEMRSVDGTVKYLYPVGENHFVESVYIP-DDE----RATLCISSQVGCKMNCKFCMTGKQGYSANLTAHQIINQIHSLPE--RDKLTNVVMMGMGEPLDNLEEVLKALDILTGSYGYAWSPKRITVSTVGLRKGLRRFIE-ESDCHLAISLHSPVTAQRAELMPAEKAFSITEMVELLKNYDFSKQRRLSFEYIVFKGLNDSQVYAKELLKLLR--GLDCRMNLIRFHSIPGVALEGADMDTMTRFRDYLTTHGLFTTIRASRGEDIFAACGML 334          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_RUBXD (Ribosomal RNA large subunit methyltransferase N OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rlmN PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 9.906e-43
Identity = 119/348 (34.20%), Postives = 169/348 (48.56%), Query Frame = 3
Query:   81 ELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLP-----IFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAI-EEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLN--KDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKNPLA 1100
            E++++  + G+  YR +Q++  +        +    LP+  R +L       GR+P     + R   A DGT K L    D   IETV IP        R T C+S+QVGCP+ C+FCATG  G  RNL + EI  QV A+  +I   RVTNVV MGMGEP LN +  L A R LN  +   +  R I +ST G+ + I++ A    Q  LAISLH P ++ R  ++P A  +P+  +M   R Y + T R++ FEY LLAGVND+                 +H+NL+ FN    + +     +    F        +        G D  AACG L     ++P A
Sbjct:   21 EVEEVLAERGEPPYRLRQVYAALAGSLASGWDEVASLPKGLREEL------AGRVPASVLELRRISRARDGTRKYLFFTRDGHAIETVMIPERS-----RRTVCISTQVGCPMACTFCATGLLGIKRNLKAREIAEQVFAVARDIAPERVTNVVVMGMGEPFLNYRETLRALRVLNDRRGFNLAARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERRRLMPVAARHPIPELMNAARYYVERTRRKLFFEYTLLAGVNDRMRHAEALAELLDH--PLYHLNLLRFNW-TDTGFSATSARRAKEFLRRARELGLSATLRPSRGQDIEAACGQLAARDARSPTA 354          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_RALME (Ribosomal RNA large subunit methyltransferase N OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rlmN PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 9.906e-43
Identity = 126/353 (35.69%), Postives = 173/353 (49.01%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHR----------VTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRR-VSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LL +    L     +LG++ +R +QL   I++      +    L +S R  L      +         T++DGT K L+ +     +ETV IP ED +G    T CVSSQ GC + C FC+TGK GFSRNLS+ EI+GQ+   E   + +          ++NVV MGMGEP+LN  +V+ A R +  D   G  +R +T+ST GV   + +L S  L   LA+SLHA N  LR+ +VP  + YPL  +M  CR Y +   R  ++FEY +L GVND                     NLIPFN    S  +R   + +  FA  L    I     K  G D  AACG L  E
Sbjct:    7 LLDLDADALTAYCGELGEKPFRARQLQRWIHQFGASHFDAMTDLAKSLREKLATRA-EIRSPAAISDHTSSDGTRKWLLDVGAGNAVETVYIP-EDTRG----TLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLWMAEFAMRAQLGRGPKDERVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRL-SKDLPVALAVSLHASNDALRDVLVPLNRKYPLAELMAACRRYLEFAPRDFITFEYCMLDGVNDGVEHARELLKLVA--DVPCKFNLIPFNPFPESGLKRSNNEQIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGE 350          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_BURXL (Ribosomal RNA large subunit methyltransferase N OS=Burkholderia xenovorans (strain LB400) GN=rlmN PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 9.906e-43
Identity = 126/358 (35.20%), Postives = 173/358 (48.32%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK------------------HRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRR-VSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            LL +  Q L      LG++ +R +QL   I++    + +    L +S R  L+    T+    I     + DGT K LI + ++  +ETV IP E      R T CVSSQ GC + C FC+TGK GFSRNL++ EI+GQ+   E   +                    VTNVV MGMGEP+LN  +V+ A R +  D   G  +R +T+ST GV   + +L +  L   LA+SLHAP+  LR+ +VP  K YPL  +M  C+ Y +   R  ++FEY +L GVND                     NLIPFN    S   R   + +  FA  L    +     K  G D  AACG L
Sbjct:    9 LLDLDAQGLVAYCDSLGEKPFRARQLQRWIHQYNAADFDGMTDLAKSLREKLKGRA-TISMPGIVSDHISTDGTRKWLIDVGNSNAVETVYIPEET-----RGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTGEIIGQLRMAEFALRASRGVDGGRATGGDGKGERVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLGA-DLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQRYLKVAPRDFITFEYCMLDGVNDSEAQARELLAVTR--DVPCKFNLIPFNPFPESGLIRSKPEQIKRFAQVLMDAGVITTVRKTRGDDIDAACGQL 357          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_VIBHB7.585e-4334.41Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_SOLUE7.585e-4335.17Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_NEIMF7.585e-4333.71Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_NEIMA7.585e-4333.71Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_MYCGI7.585e-4335.17Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_BRAJA7.585e-4335.60Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_BACTN7.585e-4334.22Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_RUBXD9.906e-4334.20Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_RALME9.906e-4335.69Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_BURXL9.906e-4335.20Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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