DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_DICT6 (Ribosomal RNA large subunit methyltransferase N OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rlmN PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.072e-52
Identity = 126/351 (35.90%), Postives = 193/351 (54.99%), Query Frame = 3
Query:   54 NVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIE-EIFKH--RVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            N +L     E++ +    G+ SYR  Q+   +YK+ +    +   LP+  R  + E  +    +P    +T    T K L++LED   IETV I  ++     R T CVS QVGC + C FCATG  G  RNL++HEIVGQ++ I+ E+F+   R++NVV+MGMGEP+LN  +V+++ R +N++  + IG + IT+ST+G+   I +L    L+  LAISLHAPN +LR  I+P  K YP+E +++    Y ++T RRV+FEY L+   ND+               +  HVNLIP+N++    ++    K +  F   L    I +      G   +A CG LR  + K+
Sbjct:    2 NNILSFDIDEIRDILRGWGEPSYRADQIFDWVYKKLILNPSSMTNLPKGLRQKIAE--YFSFDIPKVVKITGEGNTKKYLLELEDGENIETVLISHKN-----RNTVCVSVQVGCAIGCKFCATGLVGLRRNLNTHEIVGQIILIQKELFEKGDRISNVVYMGMGEPLLNYDNVVKSIRIINREWGLNIGSKHITLSTIGIVPKIYQLGEEDLKVRLAISLHAPNNELRSKIIPINKEYPIEKLLESAFYYAEKTGRRVTFEYVLIKNFNDREEHAIELAGLLK--NKPVHVNLIPWNKVPEYPWETSDLKDIFKFKKILSDAGINVTLRISYGSRIKAGCGQLRALYLKS 343          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_DESVM (Ribosomal RNA large subunit methyltransferase N OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rlmN PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.072e-52
Identity = 130/348 (37.36%), Postives = 194/348 (55.75%), Query Frame = 3
Query:   60 LLGMSEQELQK-LAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTV-TAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVL-AIEEIFKHR-----VTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQI--GQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            +L ++  EL+  +   LG+  +R +Q+   ++++  +  +    + ++ R  L EA       P  RTV T++DGTVK L+ L D  L+ETV IP E  +G +R+T C+S QVGC + C+FC+TG  GF RN++  EI+GQVL A E +   R     V N+VFMGMGEP+LNL  V+ + R LN +  +    R IT+ST G+   +++L    L + LA+SLHAPNQ++R  I+P A  + L+ +M     Y  +T  R++FEY LL GVND                    +NLI +N  +G  Y+ P +  +LAF   L S  +     K  G D +AACG L+
Sbjct:    4 ILNLTYDELEAWMTGTLGEPRFRARQVWQWLWQKNARSFDAMTNVSKATRARLAEAARITW--PEVRTVKTSSDGTVKFLLALADGALVETVLIPSESREGKVRMTQCLSCQVGCAMGCTFCSTGSMGFERNMTMAEILGQVLVAREHLGDDRPDHPIVRNLVFMGMGEPLLNLNEVMRSLRTLNDEFGLCFSPRRITVSTCGIEKGLRELGESGL-AFLAVSLHAPNQEVRARIMPRAARWTLDDLMAALESYPLKTRERITFEYLLLGGVNDSIDHARELVRLVSR--TKAKLNLIVYNPAEGLPYEAPSQARILAFEQYLWSKNVTAIIRKSKGQDIKAACGQLK 346          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CLOTE (Ribosomal RNA large subunit methyltransferase N OS=Clostridium tetani GN=rlmN PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.072e-52
Identity = 127/346 (36.71%), Postives = 189/346 (54.62%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            LL +S ++L+K  ++  ++ +R KQ+   +YK  V   E    +P+   N LQE  +      + + V+  + TVK L K  D  +IE+V +  +        T CVS+QVGC + C+FCA+  GG  R+LS  EI+GQVL  +E    R++N+V MG GEP+ N  + L   R +N +  + IGQR IT+ST G+   I++LA   LQ TLAISLHAPN  +R   +P A  Y +E +++ C  Y  +T+RR++FEYAL++ +ND+              G   HVNLIP N+I   D++      +  F+  L    I     +  G D  AACG LR  + KN
Sbjct:    7 LLDLSLEDLKKWMIENKEKEFRAKQVLDWVYKG-VYNFEAMKNIPKVITNKLQENFYLSVPSVVQKYVSKDESTVKFLFKYNDGNIIESVVMKYKHGN-----TICVSTQVGCKMGCTFCASTIGGIVRSLSHGEILGQVLKAQEETGERISNIVMMGSGEPLDNYDNSLNFIRMVNAENGLNIGQRHITLSTCGIVPKIRQLAEENLQITLAISLHAPNDNIRRKTMPIASVYSVEELIEACNYYINKTNRRITFEYALVSNLNDKEVHAEELATLLK--GMLCHVNLIPVNKIDEKDFKSSSTNRIKNFSNILLKSGIQTTIRREMGSDINAACGQLRRRYVKN 344          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CAMHC (Ribosomal RNA large subunit methyltransferase N OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.072e-52
Identity = 137/353 (38.81%), Postives = 195/353 (55.24%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDE----KGPM----RLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK---HRVTNVVFMGMGEPMLNLKSVLEAHRCL--NKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            LL  S  EL +L     +  +R KQ++  IY + V +      LP   R DL    + +G L + +   + DG+ K L +L+D + IE+V +P++DE     G +    R T CVSSQVGC + C+FC T KGGF RNLS+ EIV Q+  I++I K    R  NVV+MGMGEP+ NL++V +A + L  N+ + I  R  TIST G+ + IKKL    L   LAISLHA N +LRE ++P  ++Y + +IM+  R++  +  +RV FEY ++ GVND               G    VNLI FN   GS + RP ++ ++ F   L  H I     +  G D  AACG LR +
Sbjct:    4 LLDFSLDELGELL----KPKFRAKQIYEWIYHKNVDDFLQMKNLPLQMREDLANEFY-IGGLNVSKCEQSVDGSKKYLFELKDGKTIESVLLPMKDEITDENGEILRHKRYTICVSSQVGCKIGCAFCLTAKGGFVRNLSAGEIVEQIRLIKKINKIPYERRINVVYMGMGEPLNNLENVAKAIKILIQNEGLAISPRRQTISTSGLSSQIKKLGEMNLGVLLAISLHAVNDELREKLMPINRAYNIASIMQAVREFPIDLRKRVMFEYLVMDGVNDSINDAKTLVRLLN--GIKAKVNLIYFNPHIGSKFHRPSEENMIKFQDYLSVHGITCTIRQSKGLDISAACGQLREK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_DEIGD (Ribosomal RNA large subunit methyltransferase N OS=Deinococcus geothermalis (strain DSM 11300) GN=rlmN PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.012e-52
Identity = 131/328 (39.94%), Postives = 184/328 (56.10%), Query Frame = 3
Query:  114 QSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFR---TVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAI---EEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASY-KLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            + +R +QL   ++ + V   E    LP   R DL        RL  FR   TV +ADG+VK L  L+D R +E V +P  D K     T CVS+ VGCP +C+FCATG  GF RNL+  EIVGQVLA+   E +    + N+VFMGMGEP+LN ++ ++A R L     +G  +R +T+STVG+P  I++LA+   L   LAISLHAP++  R+ I+P+     +  IM   R+Y   T RRV+FEY++L G+ND               G   HVNLIP N   GS ++   ++ + AF   L +  + ++  +  G DA AACG L
Sbjct:   15 EGFRQRQLLEWVFVQGVGTFEAMTNLPAQARADLASRF----RLNPFREIETVRSADGSVKYLFTLQDGRQMEAVYMPYLDRK-----TICVSTMVGCPAKCAFCATGAMGFGRNLTPGEIVGQVLAVAGGEGLAPRELRNLVFMGMGEPLLNYENTMQAARILLHPQALGMSKRRVTLSTVGLPKGIRRLAAEDDLGIKLAISLHAPDEATRQRIIPTGHRNSIAEIMAAAREYQAVTGRRVTFEYSMLRGINDHLWQAEELADLLR--GLVSHVNLIPMNPWDGSGFESSTEEQIQAFYDVLAARGVDVSVRRSRGKDAGAACGQL 331          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_NITSB (Ribosomal RNA large subunit methyltransferase N OS=Nitratiruptor sp. (strain SB155-2) GN=rlmN PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 5.240e-52
Identity = 131/353 (37.11%), Postives = 197/353 (55.81%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVE----DEKGPM----RLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEE---IFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNE 1079
            +L ++++ELQ+         +R  Q++  IY++  K+ E+   LP+S R +L+E  +T+    I     + DG+ K L+ L+D   +E+V +P++    DEKG +    R T CVSSQVGC + C FC T KGGF RNL+  EIV QVL I E   I  +R  N+V+MGMGEP+ NL++V +A +  + +  + I  R  TIST G+   IKKL    L   LAISLHA + +LR+ ++P  K+Y +E++++  +++  +  +RV FEY ++  +ND               G    VNLI FN   GS +QRP  K V AF   L  H +     +  G D  AACG L+ +
Sbjct:    4 ILDLTKEELQQEVTP----KFRANQIYQWIYQKGAKDFESMSNLPKSMREELKEK-FTITPPKILNVEVSKDGSKKYLLGLQDGHTVESVLLPMKKEERDEKGNILKEARYTVCVSSQVGCKVGCEFCLTAKGGFVRNLTPGEIVEQVLTIREDNNIPANRRVNIVYMGMGEPLDNLENVAKAVKIFSDEHGMSISPRRQTISTSGLAPKIKKLGEMNLGVLLAISLHAVDDELRQKLMPINKAYNIESVIQAVKEFPIDQRKRVMFEYLMIKNLNDDLKAAKKLVKLLH--GIKAKVNLIYFNPYPGSPFQRPEPKDVEAFQKYLLDHGVLCTIRESKGLDISAACGQLKEK 349          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_GEOTN (Ribosomal RNA large subunit methyltransferase N OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rlmN PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 6.844e-52
Identity = 126/360 (35.00%), Postives = 195/360 (54.17%), Query Frame = 3
Query:   24 SSSRAPRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF---KHRVTNVVFMGMGEPMLNLKSVLEAHRCLN--KDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            S+  A  +    +  ++  EL++  V  G++ +R  Q++  +Y ++V +      LP+  R  L  A +++  L      T+ DGT+K L +L D   IETV +     +     + CV++QVGC + C+FCA+  GG  R+L + EIV QV+ +++     + RV+++V MG+GEP  N  ++++  R +N  K + IG R IT+ST G+   I + A   +Q   AISLHAP  +LR  ++P  K+YPL  +M+  R Y ++T RRV+FEY L  GVNDQ              G   HVNLIP N +   +Y R  +  + AF  AL+ H I +   +  G D  AACG LR + RK
Sbjct:    9 STGEAQLLPLPSIYSLTLDELKEWLVAHGEKPFRATQIYEWLYGKRVTDFAEMTNLPKRLREQLASA-FSITTLKTIVKQTSKDGTIKFLFELHDGYSIETVLM-----RHNYGNSVCVTTQVGCRIGCTFCASTLGGLKRHLEAGEIVAQVVQVQKALDETEERVSSIVVMGIGEPFDNYDALIKFLRIVNHSKGLNIGARHITVSTSGIIPKIYQFADEGMQINFAISLHAPTTELRTKLMPINKAYPLPKLMEAVRYYIEKTGRRVTFEYGLFGGVNDQLEHAEQLAELLK--GLKCHVNLIPVNYVPERNYVRTPRNQIFAFERALKKHGINVTIRREHGHDIDAACGQLRAKERK 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_FUSNN (Ribosomal RNA large subunit methyltransferase N OS=Fusobacterium nucleatum subsp. nucleatum GN=rlmN PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 6.844e-52
Identity = 125/354 (35.31%), Postives = 201/354 (56.78%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRT----VTAADGTVKLLIKLEDNRLIETVGIPVEDEKGP-MRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHR---VTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALES-HKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +L ++++EL +L V LG + + GK++   ++K+  +  +    L    R  L+E  +    +P F      V+  D T K L +LED   IETV +  +D K   +R T CVSSQVGCP++CSFCATG+ G+ RNLS  EI+ Q+  +E   + +   + N+VFMGMGEP+LN+ ++ +A   ++ +  + I +R ITIST GV + I+K+   K+   LAISLH+   + R+ I+P  K++PLE +     +Y ++T RR++FEY L+   N               +   H VNLIP+N+++G+++ RP  K +  F   L++  K+ +   +  G D   ACG LR   +K
Sbjct:    8 ILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKEKTY----IPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHKDSKNKEIRNTLCVSSQVGCPVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRKKGENLNNLVFMGMGEPLLNIDNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDKIIPINKNFPLEDLSAVLIEYQKQTKRRITFEYILIDNFNISETDANALADFIHQF--DHVVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTLRQEKGSDIDGACGQLRQRNKK 355          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_THEM4 (Ribosomal RNA large subunit methyltransferase N OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rlmN PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 8.939e-52
Identity = 132/340 (38.82%), Postives = 183/340 (53.82%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLN--KDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            +L +  +EL      +G + YR  Q+ + IYK+KV E E    L +  R  L E  +      +   ++  D T K L +L D   IE+V +         R+TAC+S+QVGCP++C FCATG+ GF RNL+  EIV Q+LAIE   K +V NVV+MGMGEP+LN ++V+++ + LN  K + IG R IT+STVG+P  I  LA   L   LA+SLHA     R+ I+P  K Y +E ++   R Y + T  RV+ EY L+   ND               G   +VNLIP N +    + RP + A+  F   LE + I     K  G D  AACG LR
Sbjct:    4 ILDLKYEELVNEFQRIGLEKYRVDQVLNWIYKKKVFEFEKMTNLSKEHRKLLSEKFFIDLPKLLDMQISKIDKTTKFLWELRDGNTIESVALFHSG-----RVTACISTQVGCPVKCEFCATGQSGFVRNLTVGEIVSQILAIELNRKIKVGNVVYMGMGEPLLNFENVIDSIKMLNDKKMLNIGIRRITVSTVGIPEKIIALAESGLNVKLALSLHAVTDYKRDQIIPLNKKYSVEELIYSLRKYQEITGNRVTIEYILIREFNDYPEDAIRLVELLR--GLSVYVNLIPINPV-NPKFHRPNRWALERFKEILEKNGIECEIRKEKGTDIDAACGQLR 335          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_LEGPH (Ribosomal RNA large subunit methyltransferase N OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rlmN PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 8.939e-52
Identity = 137/352 (38.92%), Postives = 191/352 (54.26%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQV-LAIEEIFKH------RVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQ-ETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFR 1085
            LL  +  +L++L +   ++ +R +QL   I++  +++      L +  RN L +    +    I     +ADGT K L+KLE    IETV IP E  +G    T CVSSQVGC L CSFC+T K GF+RNLS+ EI+GQV LA  E+  +      ++TNVV MGMGEP+LN  +V+ A   +  D+  G  +R +T+ST GV   +++L        LA+SLHAP  +LR  +VP  K YPL  ++  C+ YF+ E  R+V+FEY +L GVNDQ                   VNLIPFN    + YQR  ++ + AF   L  H I     K  G D  AACG L  E +
Sbjct:    8 LLNYNYSQLRELLIAWDEKPFRAQQLFQWIHQVGIRDFAQMTNLGKVLRNKLSQLA-CIDLPEIVACQKSADGTHKWLLKLECGNCIETVFIP-EANRG----TLCVSSQVGCALNCSFCSTAKQGFNRNLSTAEIIGQVWLAARELSDNNGTHDKKITNVVMMGMGEPLLNFDNVVSAMNIMMDDLAYGLSKRRVTLSTSGVLPEMERLREVS-PVALAVSLHAPTDELRNELVPINKKYPLSQLISLCKRYFKDEPRRKVTFEYVMLKGVNDQPEHASQLIKLLH--NVPAKVNLIPFNPFPLTQYQRSSRETIDAFRDKLMKHGINTITRKTRGDDIDAACGQLAGEVK 350          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_DICT63.072e-5235.90Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_DESVM3.072e-5237.36Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CLOTE3.072e-5236.71Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CAMHC3.072e-5238.81Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_DEIGD4.012e-5239.94Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_NITSB5.240e-5237.11Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_GEOTN6.844e-5235.00Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_FUSNN6.844e-5235.31Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_THEM48.939e-5238.82Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_LEGPH8.939e-5238.92Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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