DY263009

Overview
NameDY263009
Unique NameDY263009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CLOPH (Ribosomal RNA large subunit methyltransferase N OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rlmN PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 3.397e-51
Identity = 118/337 (35.01%), Postives = 182/337 (54.01%), Query Frame = 3
Query:   78 QELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEF 1082
            +EL+     +G++ +R KQ++  ++ + V++ E    L +  R  L      +    + R  +  DGTVK L +L D  ++E V +           + C+SSQVGC + C FCA+  GG +RNL + E++ +V  I+ +   RV+N+V MG GEPM N  + ++  R ++    + I QR IT+ST G+   ++ LA      TLA+SLHAPN + R  I+P A SY L+ ++  C  Y+++T RRVS+EY+L+ GVND               G+  HVNLIP N IK  DY+R     +  F   LE ++I +   +  G D  AACG LR  +
Sbjct:   16 EELKASLKIIGEKEFRAKQIYEWLHVKLVRDFEEMTNLSKELRAKLASEYELICVNDLERYESKMDGTVKYLFRLSDGNVVECVLMKYHHGN-----SVCISSQVGCRMGCRFCASTLGGLTRNLKTSEMLDEVYQIQRLSGERVSNIVIMGTGEPMDNYDNFVKFIRMISSSDGLNISQRNITVSTCGIVPKMRALAEEGFAITLALSLHAPNDEERAKIMPVANSYQLQDVLNACDYYYEKTGRRVSYEYSLVDGVNDTAACAKELSRLLK--GKNCHVNLIPVNPIKERDYKRSTGNNIQNFKNILEKNRINVTIRREMGSDINAACGQLRKSY 345          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_HAHCH (Ribosomal RNA large subunit methyltransferase N OS=Hahella chejuensis (strain KCTC 2396) GN=rlmN PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 7.567e-51
Identity = 133/348 (38.22%), Postives = 182/348 (52.30%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIF-------KHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKDVQIG--QRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETS--RRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPL 1070
            LLGM+  +L+     LG++ +R  QL   +Y   V + +    + ++ R  L+E         I+  ++A DGT K +++L     IETV IP   + G  R T CVSSQ+GC L CSFC+TGK GF+RNLSS EI+GQ+      F       +  VTN+VFMGMGEP+LN  +V+ A   +  D   G  +R +T+ST G+   + KL       +LAISLHAPN  LR+ +VP  K YP+E ++  C  Y  + S  RR++ EY L+AGVND                    +NLIPFN    S Y+RP + A L F   L             G D  AACG L
Sbjct:   10 LLGMNRSDLETFFESLGEKKFRATQLMKWMYHLGVSDFDLMTNMSKALREKLKEVAEVSVPEVIYEDISA-DGTRKWVMRLAGGNSIETVYIP---DNG--RGTLCVSSQIGCSLDCSFCSTGKQGFNRNLSSAEIIGQLWIAARSFGDYDLSKERYVTNIVFMGMGEPLLNFDNVVRACDVMMDDFGFGISKRRLTVSTSGLVPALDKLGDV-TDVSLAISLHAPNNSLRDVLVPVNKKYPIEELLAACHRYLGKLSDKRRITVEYTLIAGVNDSETHAHELRDLLR--DLPCKINLIPFNPFPNSGYERPSRNATLRFQKVLSDAGYVATVRTTRGDDIDAACGQL 348          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CAMFF (Ribosomal RNA large subunit methyltransferase N OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=rlmN PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 9.883e-51
Identity = 134/351 (38.18%), Postives = 188/351 (53.56%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDE--------KGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEE---IFKHRVTNVVFMGMGEPMLNLKSVLEAHRCL--NKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            LL +S+ EL  L        +R KQ++  +YK+  +  +    + +  R +L+   + +  L   R+ T+ DG++K L KL D + IE+V +P+++E        +   R T CVSSQVGC + CSFC T KGGF RNLS+ EIV Q+L I+    I   R  NVV+MGMGEP+ NL +V +A   L  N  + IG R  TIST G+ + IKKL    L   LAISLHA   +LR  ++P  K+Y + A+M   R +  +  +RV FEY ++  VND               G    VNLI FN  +GS YQRP  + V  F   L+S  +     +  G D  AACG L+
Sbjct:    4 LLDLSQDELANLL----SPKFRAKQIYEWVYKKNARSFDEMTNISKDVRENLKSEFY-LDPLTCVRSETSKDGSIKYLFKLTDGKTIESVLLPMKEEISSEDGSVERHARYTICVSSQVGCKMGCSFCLTAKGGFVRNLSAGEIVAQILWIKRENNIPYERRVNVVYMGMGEPLDNLTNVSKAVSILKDNDGLAIGARRQTISTSGLASQIKKLGELDLGVLLAISLHAVTDELRAKLMPINKAYNIAAVMDAVRAFPIDMRKRVMFEYLIMDKVNDNLSDAKALVKLLH--GIKAKVNLILFNPHEGSQYQRPSIENVDNFRTYLQSRGVTCTIRQSKGLDISAACGQLK 347          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CAMLR (Ribosomal RNA large subunit methyltransferase N OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=rlmN PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.291e-50
Identity = 135/356 (37.92%), Postives = 192/356 (53.93%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVE----DEKGPM----RLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFK---HRVTNVVFMGMGEPMLNLKSVLEAHRCL--NKDVQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRK 1088
            +L  +++EL+ L     Q  +R KQ+   +YK+   +      LP+ FR  LQ+  +    L   +   + DG++K L +L D + IE V +P++    DE G +    R T CVSSQVGC   CSFC T KGG SRNLS+ EIVGQ+L I++  K    R  N+V+MGMGEP+ NLK+V +A + L  N  + I  R  TIST G+   IK+L    L   LAISLHA N +LR  ++P  K+Y + +IM+  R++  +  +RV FEY L+ G+ND+              G    VNLI FN  +GS Y RP  +  + F   L +  +     +  G D  AACG L+    K
Sbjct:    7 MLDFTKEELENLV----QPKFRAKQIFEWVYKKYADDFLQMSSLPKDFRVYLQK-NFHFSPLKCVKDEKSKDGSIKYLFELLDGKKIEAVLLPMKEELVDENGKIIKHARYTICVSSQVGCKSGCSFCLTAKGGLSRNLSAGEIVGQILWIKKHNKIPYERRVNIVYMGMGEPLDNLKNVSKAVKILADNDALAISPRRQTISTSGLAKQIKELGEMNLGVLLAISLHAVNDELRSELMPINKAYNIASIMEAVRNFPIDQRKRVMFEYLLIDGINDKIEHAKELVKLLN--GIKAKVNLILFNPHEGSLYNRPSVENAIKFQDYLSAKGVTCTIRESKGLDISAACGQLKERQSK 355          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CLOPS (Ribosomal RNA large subunit methyltransferase N OS=Clostridium perfringens (strain SM101 / Type A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.202e-50
Identity = 118/347 (34.01%), Postives = 200/347 (57.64%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAA-DGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            +L  + +EL++   + G+ ++R KQ+   IYK++V   E    + ++    L E  + +G   +   ++++ DGT K+L+ L D  +IE V +     K     + CVS+Q+GC + C FCA+   G  RNL++ EI+ +VL  +++   R++N+V MG GEP+ N  +V++    +N D  + IGQR IT+ST G+   I+++A  ++Q TLAISLHA + + R++I+P A  Y +  I+  C  Y ++T RR++FEY+L++GVND               G   HVNLIP N+IK +++++  KK +  F   L+++ +     +  G D  AACG LR  + K+
Sbjct:    4 ILDFTLEELKEWMKENGENAFRAKQIFDWIYKKEVFNFEEMKNISKALIGKLSE-NFYIGIPEVIDYLSSSEDGTRKILLGLGDGNIIECVIM-----KYKYGNSICVSTQIGCRMGCKFCASTLEGMVRNLTAGEILSEVLIGQKLLGERISNIVLMGSGEPLDNYDNVMKFLEIVNADYGLNIGQRHITLSTCGLVPKIREMADKEMQVTLAISLHAVSDEKRKTIMPIANKYSISEILDACNYYIEKTGRRITFEYSLVSGVNDTKEDAKSLGRLLK--GMLCHVNLIPVNEIKENEFKKSTKKDIETFLNTLKTYGVEATVRREMGSDINAACGQLRRSYIKS 342          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_BACA2 (Ribosomal RNA large subunit methyltransferase N OS=Bacillus amyloliquefaciens (strain FZB42) GN=rlmN PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.202e-50
Identity = 125/366 (34.15%), Postives = 193/366 (52.73%), Query Frame = 3
Query:    9 KLSVSSSSRAPRVDANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKH---RVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            +L  +S  +  R +   +      E+++   + G++ +R  Q+   +Y+++V   +    L +S R  L E+ + +  L      T+ DGT+K L +L D   IETV   +  E G    + CV++QVGC + C+FCA+  GG  RNL + EIV QV+ +++       RV++VV MG+GEP  N   +L   + +N D  + IG R IT+ST G+   I   A  K+Q   AISLHAPN ++R  ++P  K+Y L  +M+  + Y ++T RR+SFEY L  GVNDQ                  HVNLIP N +   DY R  +  + AF   L+S  + +   +  G D  AACG LR + R++
Sbjct:    3 QLKKTSVRKELRTEQPSIYSFELDEIKQWLTENGEKPFRAAQIFEWLYEKRVSSFDEMTNLSKSLREKL-ESNFVLTTLKTAVKQTSQDGTMKFLFELHDGYTIETV--LMRHEYGN---SVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVKVQKALDETDERVSSVVIMGIGEPFDNFNEMLAFLKIINHDKGLNIGARHITVSTSGIIPKIYDFADQKMQINFAISLHAPNTEIRSRLMPINKAYKLPDLMEAVKYYIEKTGRRISFEYGLFGGVNDQVEHAEELAELLK--DVKCHVNLIPVNYVPERDYVRTPRDQIFAFEKTLKSRGVNVTIRREQGHDIDAACGQLRAKERQD 360          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_DESVV (Ribosomal RNA large subunit methyltransferase N OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rlmN PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 3.756e-50
Identity = 124/348 (35.63%), Postives = 189/348 (54.31%), Query Frame = 3
Query:   60 LLGMSEQELQK-LAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVT-AADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHR------VTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            +L ++ +EL+  +  +LG+  +R +Q+   ++++  +  +    + ++ R  L E    V   P   TV  +ADGT K L++L D  L+ETV IP    +G +R+T C+S QVGC + C+FC+TG  GF RN++  EI+GQVL               + N+VFMGMGEP+LNL  V+ + R LN +  +    R IT+ST G+   +++L    L + LA+SLHAPNQ++R+ I+P A  + L+ ++     Y  +T  RV+FEY LL GVND                    +NLI +N  +G  Y  P  + +LAF   L S  I     K  G D +AACG L+
Sbjct:    4 ILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKA--VITWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCTFCSTGTMGFERNMTMGEILGQVLVARAHLGDSRPDHPILRNLVFMGMGEPLLNLNEVMRSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGL-AFLAVSLHAPNQEIRKRIMPKAAHWHLDDLITALESYPLKTRERVTFEYLLLGGVNDGIEHARELVRLVSR--TKGKLNLIVYNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLK 346          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_DESVH (Ribosomal RNA large subunit methyltransferase N OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=rlmN PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 3.756e-50
Identity = 124/348 (35.63%), Postives = 189/348 (54.31%), Query Frame = 3
Query:   60 LLGMSEQELQK-LAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVT-AADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHR------VTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLR 1073
            +L ++ +EL+  +  +LG+  +R +Q+   ++++  +  +    + ++ R  L E    V   P   TV  +ADGT K L++L D  L+ETV IP    +G +R+T C+S QVGC + C+FC+TG  GF RN++  EI+GQVL               + N+VFMGMGEP+LNL  V+ + R LN +  +    R IT+ST G+   +++L    L + LA+SLHAPNQ++R+ I+P A  + L+ ++     Y  +T  RV+FEY LL GVND                    +NLI +N  +G  Y  P  + +LAF   L S  I     K  G D +AACG L+
Sbjct:    4 ILNLTYEELEAFMTAELGEPRFRARQVWQWLWQKCARSFDEMTNVSKATRARLAEKA--VITWPEVETVQKSADGTTKFLLRLADGALVETVLIPSASREGTLRITQCLSCQVGCAMGCTFCSTGTMGFERNMTMGEILGQVLVARAHLGDSRPDHPILRNLVFMGMGEPLLNLNEVMRSLRTLNDEFGLSFSPRRITVSTCGIEKGLRELGESGL-AFLAVSLHAPNQEIRKRIMPKAAHWHLDDLITALESYPLKTRERVTFEYLLLGGVNDGIEHARELVRLVSR--TKGKLNLIVYNPAEGDPYDAPTPERILAFEQYLWSKNITAIIRKSKGQDIKAACGQLK 346          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CLOPE (Ribosomal RNA large subunit methyltransferase N OS=Clostridium perfringens GN=rlmN PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 3.756e-50
Identity = 117/347 (33.72%), Postives = 200/347 (57.64%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAA-DGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            +L  + +EL++   + G+ ++R KQ+   IYK++V   E    + ++    L E  + +G   +   ++++ DGT K+L+ L D  +IE V +  +        + CVS+Q+GC + C FCA+   G  RNL++ EI+ +VL  +++   R++N+V MG GEP+ N  +V++    +N D  + IGQR IT+ST G+   I+++A  ++Q TLAISLHA + + R++I+P A  Y +  I+  C  Y ++T RR++FEY+L++GVND               G   HVNLIP N+IK +++++  KK +  F   L+++ +     +  G D  AACG LR  + K+
Sbjct:    4 ILDFTLEELKEWMKENGESAFRAKQIFDWIYKKEVFNFEEMKNISKALIGKLSE-NFYIGIPEVIDYLSSSEDGTRKILLGLGDGNIIECVIMRYKYGN-----SICVSTQIGCRMGCKFCASTLEGMVRNLTAGEILSEVLIGQKLLGERISNIVLMGSGEPLDNYDNVMKFLELVNADYGLNIGQRHITLSTCGLVPKIREMADKEMQVTLAISLHAVSDEKRKTIMPIANKYSISEILDACNYYIEKTGRRITFEYSLVSGVNDTKEDAKSLGRLLK--GMLCHVNLIPVNEIKENEFKKSTKKDIETFLNTLKTYGVEATVRREMGSDINAACGQLRRSYIKS 342          
BLAST of DY263009 vs. ExPASy Swiss-Prot
Match: RLMN_CLOP1 (Ribosomal RNA large subunit methyltransferase N OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 3.756e-50
Identity = 117/347 (33.72%), Postives = 200/347 (57.64%), Query Frame = 3
Query:   60 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAA-DGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHRVTNVVFMGMGEPMLNLKSVLEAHRCLNKD--VQIGQRMITISTVGVPNTIKKLASYKLQSTLAISLHAPNQKLRESIVPSAKSYPLEAIMKDCRDYFQETSRRVSFEYALLAGVNDQXXXXXXXXXXXXXWGRGHHVNLIPFNQIKGSDYQRPYKKAVLAFAAALESHKIPLAYVKRGGWDARAACGPLRNEFRKN 1091
            +L  + +EL++   + G+ ++R KQ+   IYK++V   E    + ++    L E  + +G   +   ++++ DGT K+L+ L D  +IE V +  +        + CVS+Q+GC + C FCA+   G  RNL++ EI+ +VL  +++   R++N+V MG GEP+ N  +V++    +N D  + IGQR IT+ST G+   I+++A  ++Q TLAISLHA + + R++I+P A  Y +  I+  C  Y ++T RR++FEY+L++GVND               G   HVNLIP N+IK +++++  KK +  F   L+++ +     +  G D  AACG LR  + K+
Sbjct:    4 ILDFTLEELKEWMKENGESAFRAKQIFDWIYKKEVFNFEEMKNISKALIGKLSE-NFYIGIPEVIDYLSSSEDGTRKILLGLGDGNIIECVIMRYKYGN-----SICVSTQIGCRMGCKFCASTLEGMVRNLTAGEILSEVLIGQKLLGERISNIVLMGSGEPLDNYDNVMKFLELVNADYGLNIGQRHITLSTCGLVPKIREMADKEMQVTLAISLHAVSDEKRKTIMPIANKYSISEILDACNYYIEKTGRRITFEYSLVSGVNDTKEDAKSLGRLLK--GMLCHVNLIPVNEIKENEFKKSTKKDIETFLNTLKTYGVEATVRREMGSDINAACGQLRRSYIKS 342          
The following BLAST results are available for this feature:
BLAST of DY263009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLMN_CLOPH3.397e-5135.01Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_HAHCH7.567e-5138.22Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CAMFF9.883e-5138.18Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CAMLR1.291e-5037.92Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CLOPS2.202e-5034.01Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_BACA22.202e-5034.15Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_DESVV3.756e-5035.63Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_DESVH3.756e-5035.63Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CLOPE3.756e-5033.72Ribosomal RNA large subunit methyltransferase N OS... [more]
RLMN_CLOP13.756e-5033.72Ribosomal RNA large subunit methyltransferase N OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263009 ID=DY263009; Name=DY263009; organism=Citrus clementina; type=EST; length=1342bp
CGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGAC
GCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCGT
CGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATTT
ACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTCC
TTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGAT
TTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAGC
TGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGAG
AAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCCC
ATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAATC
TTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTTC
AAGCATAGGGTGACAAACGTAGTGTTCATGGGAATGGGCGAGCCAATGTT
GAACCTAAAGTCTGTGCTTGAAGCACATCGATGTTTGAATAAGGATGTGC
AAATTGGACAAAGGATGATTACAATTTCCACTGTGGGGGTTCCGAACACA
ATTAAAAAGTTGGCCTCTTACAAACTTCAGTCAACATTGGCTATCAGCTT
ACATGCTCCAAACCAGAAACTGAGGGAATCAATTGTGCCAAGTGCAAAGT
CCTATCCTCTTGAAGCAATCATGAAGGATTGCAGGGATTACTTCCAGGAA
ACGAGTCGGCGGGTGTCCTTTGAGTATGCTCTATTAGCTGGAGTCAATGA
TCAAGTAGAACATGCAGTAGAACTTGCAGAGCTACTTCATGAATGGGGAC
GTGGTCATCATGTGAACCTCATACCCTTCAATCAAATAAAAGGATCTGAT
TATCAACGCCCTTACAAAAAGGCGGTGCTAGCATTTGCAGCTGCTCTGGA
ATCCCATAAAATACCACTAGCATACGTCAAAAGAGGGGGATGGGATGCTA
GGGCAGCATGTGGTCCGCTAAGAAATGAATTTCGAAAAAATCCTTTGGCC
CTTTGACCTCAGTACTTCAAGTTTCGAAATCAAAAATTGGGGTGTACTTC
CTTGAAGGGGAAAAGGGGGGATTCTTTTCCACCACCAAACCTTTGTATTC
CTCCCTTCCCTACAAAACACAAAAAAACTTTTTCCCCCCCCCCTCCCCCC
AAAAAAAAGATCTGTGGGTGGGGAGAGAGCGGATTGGGGGGGGCGCAACC
CCCATAGTTTTTTTGTTGGAAGAGGGGGTGGGGGGGGGAACC
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