DY263012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_RAT (Protein farnesyltransferase subunit beta OS=Rattus norvegicus GN=Fntb PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-24 Identity = 64/207 (30.92%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 284 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGWV 886 L +KH Y+ + + D++E + L YW L +L++L + + + DV ++ CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGSF + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G FC + AL I ++ K LL WV Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWV 277 HSP 2 Score: 35.039 bits (79), Expect = 2.110e-24 Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 3 Query: 876 LAGWVCERQVK-SGGLYGRPEKLPDVCYSWWVLSSLVMIDK 995 L WV RQ++ GG GR KL D CYS+W L ++ + Sbjct: 273 LLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_MOUSE (Protein farnesyltransferase subunit beta OS=Mus musculus GN=Fntb PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-24 Identity = 64/207 (30.92%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 284 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGWV 886 L +KH Y+ + + D++E + L YW L +L++L + + + DV ++ CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGSF + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G FC + AL I ++ K LL WV Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWV 277 HSP 2 Score: 35.039 bits (79), Expect = 2.110e-24 Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 3 Query: 876 LAGWVCERQVK-SGGLYGRPEKLPDVCYSWWVLSSLVMIDK 995 L WV RQ++ GG GR KL D CYS+W L ++ + Sbjct: 273 LLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_BOVIN (Protein farnesyltransferase subunit beta OS=Bos taurus GN=FNTB PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.650e-24 Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 284 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGWV 886 L +KH Y+ + + D++E + L YW L +L++L + + + DV ++ CQ GGF G G PH+ T +AV L + + D+++ +K+ Y+ L+ DGSF GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G FC + AL I ++ K LL WV Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWV 277 HSP 2 Score: 35.039 bits (79), Expect = 4.650e-24 Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 3 Query: 876 LAGWVCERQVK-SGGLYGRPEKLPDVCYSWWVLSSLVMIDK 995 L WV RQ++ GG GR KL D CYS+W L ++ + Sbjct: 273 LLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_ARATH (Protein farnesyltransferase subunit beta OS=Arabidopsis thaliana GN=FTB PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.433e-23 Identity = 62/207 (29.95%), Postives = 105/207 (50.72%), Query Frame = 2 Query: 281 ELAADKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF--DK-LDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKD-LLGW 883 E+ DK + Y++ + + F S+ L YW L ++ +LG+ +D E + I ++ +CQ GG+ G G PH+ T +AV L DK L ++ +K+S ++ +++ G F GE+D R Y AI SIL +D +YI+SC+ +GG G PG E+H G +C + A+ + + ++ D L+ W Sbjct: 2 EIQRDKQLDYLMKGLRQLGPQFSSLDANRPWL--CYWILHSIALLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNW 206 HSP 2 Score: 35.4242 bits (80), Expect = 8.433e-23 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 3 Query: 876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWIN 1010 L W RQ G GR KL D CY++W + V++ +++ N Sbjct: 203 LMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTN 247
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_DICDI (Protein farnesyltransferase subunit beta OS=Dictyostelium discoideum GN=fntB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.093e-22 Identity = 60/216 (27.78%), Postives = 102/216 (47.22%), Query Frame = 2 Query: 320 VEKKK------DSFESVVMEHLRLNGA-----YWGLTTLDILGKLDAV----------------DEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDKDLL 877 +EKKK + E + M H L+ + +W L +D+L LD+ D+ + + + GGF G H HV+ T +AV L + + +D + + ++ ++ +G+F+ + GE D+R +Y AI S+L L V++++SC+ +GGFG P E+H G FC V AL+I +LH +D + L Sbjct: 56 IEKKKILNFLMNGIEKIPMSHQGLDSSKVWISFWILNGMDMLDSLDSYPNISSRASKYLSILQNDDNNGNNNNRENNQNGGGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNSLHKIDMNSL 271 HSP 2 Score: 37.3502 bits (85), Expect = 1.093e-22 Identity = 14/27 (51.85%), Postives = 16/27 (59.26%), Query Frame = 3 Query: 885 WVCERQVKSGGLYGRPEKLPDVCYSWW 965 W+ RQ GG GR KL D CYS+W Sbjct: 274 WITYRQSNDGGFEGRTNKLVDTCYSYW 300
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_SCHPO (Protein farnesyltransferase subunit beta OS=Schizosaccharomyces pombe GN=cpp1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 8.374e-22 Identity = 63/197 (31.98%), Postives = 107/197 (54.31%), Query Frame = 2 Query: 296 KHVKYIISVEKKKDSFES--VVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLD---ILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQ-RLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVDK 868 KH+KY+ K D S V++ R YW L++L ILGKLD+ E IS + + + SGGF G G D H+L T +++ + L D D +++ D++ +++ L+N DGSF + GE D R Y A+C S++ +D + ++++ C+ +GG P E+H G FC + A+A+ L ++++ Sbjct: 33 KHLKYLT---KMLDPLPSPFTVLDASRAWMVYWELSSLAILGKLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAVCVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDNLNE 226
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_SCHPO (Geranylgeranyl transferase type-1 subunit beta OS=Schizosaccharomyces pombe GN=cwg2 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.938e-19 Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 3 Query: 876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFLL 1037 L W+ RQ+ SGGL GR K D CY++WVLSSL ++D + +I+ G+L K+LL Sbjct: 237 LIRWLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL 290 HSP 2 Score: 57.7658 bits (138), Expect = 2.938e-19 Identity = 48/176 (27.27%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 380 AYWGLTTLDILGKLDAVDEEDVISWI-----------LKCQDESGGFAGNIG-------HDPHVLYTLSAVQ-VLALFDKLDILDADKVSNYVAGLQNGDGSFSG---DIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAI 841 A++ L LD+L L+ +D++D SWI K SG A G +P + T+ ++ +L L D L +D D + N+V + G F + D R Y+A S+L + +++YI SC+ +GGF P GE+H+G FC + + ++ Sbjct: 34 AFFCLLGLDLLNALNTIDDDDKKSWIEWIYKNYVTKESKGIKYSGFQAYRTGIQPISFEQEPQLAGTVFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLYMATTIASLLD-FSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSL 208
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_PEA (Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.080e-19 Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 383 YWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFD---KLDILDADKVSNYVAGLQNGDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGWV 886 YW + ++ +LG+ +D E++ + ++ +CQD +GG+AG G PH+ T +AV L L ++ +K+ ++ ++ +G F GE+D R Y AI S+L LD + ++I+SC+ +GG PG E+H G FC + A+ + ++ +D LL WV Sbjct: 50 YWIIHSIALLGESIDDDLEDNTVDFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGEKSLASINRNKLYGFMRRMKQPNGGFRMHDEGEIDVRACYTAISVASVLNILDDELIKNVGDFILSCQTYEGGLAGEPGSEAHGGYTFCGLAAMILIGEVNRLDLPRLLDWV 222
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_RAT (Geranylgeranyl transferase type-1 subunit beta OS=Rattus norvegicus GN=Pggt1b PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.598e-16 Identity = 64/219 (29.22%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 293 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI-----LKCQDESG----GFAGN----IGHDP-------------HVLYTLSAVQVLALF-DKLDILDADKVSNYVAGLQNGDGSFSGDIWG-EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHV 862 D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI L +D S GF G+ I +P H+ T + + L + D L +D + + LQ DGSF G E D RF Y A C +L +++ KA+ YI + D G G ESH G FC + +L + L V Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEV 239 HSP 2 Score: 34.2686 bits (77), Expect = 1.598e-16 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 885 WVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWIN 1010 W RQ G +GRP K D CYS+WV ++L ++ + N Sbjct: 251 WCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTN 290
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_MOUSE (Geranylgeranyl transferase type-1 subunit beta OS=Mus musculus GN=Pggt1b PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.077e-16 Identity = 64/219 (29.22%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 293 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI-----LKCQDESG----GFAGN----IGHDP-------------HVLYTLSAVQVLALF-DKLDILDADKVSNYVAGLQNGDGSFSGDIWG-EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHV 862 D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI L +D S GF G+ I +P H+ T + + L + D L +D + + LQ DGSF G E D RF Y A C +L +++ KA+ YI + D G G ESH G FC + +L + L V Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLSRCGFRGSSYLGIPFNPSKNPGAAHPYDSGHIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEV 239 HSP 2 Score: 34.2686 bits (77), Expect = 2.077e-16 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 885 WVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWIN 1010 W RQ G +GRP K D CYS+WV ++L ++ + N Sbjct: 251 WCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTN 290 The following BLAST results are available for this feature:
BLAST of DY263012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263012 ID=DY263012; Name=DY263012; organism=Citrus clementina; type=EST; length=1205bpback to top |