DY263017

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPC2_SCHPO (DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.470e-30
Identity = 111/367 (30.25%), Postives = 171/367 (46.59%), Query Frame = 2

Query:    2 STGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLG-VTGLVSTSILEPIFEQLFNSGMEKLADDASYSL--GGKFKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVEN-MGKIKS-----LEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRG 1075
            STG WS    + ER +G+   L R + +  L  + R   Q + T KV   R    S +G +C   TP+GE CGLVKNL  +T + +    EPI +  +  G+E +   +   L   G + V+++G  +G+ +    FV+              + I  +  Q  V I  D GRI RPL++V+N + K++S     L+   + F+  L  G++E V   EE D      I    +DI        TH E++   +LG   G+IP+ +H+ + R  YQ      QAIG    N   R+DTL + + YPQ+P+ +T   + +G             +L  GQNA V      G   ED  V+ ++S  RG
Sbjct:  449 STGNWSLKRFKMER-AGVTHVLSRLSYISALGMMTRITSQFEKTRKVSGPRSLQASQFGMLCTSDTPEGEACGLVKNLALMTHITTDEEEEPIIKLAYAFGIEDIHVISGRELHSHGTYLVYLNGAILGISRYPSLFVASFRKLRRSGKISPFIGIFINTHQRAVFISTDGGRICRPLIIVQNGLPKVESKHIRLLKEGKWGFEDFLKQGLVEYVDVNEENDSL----ISVYERDITPDT----THLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAM-GKQAIGAIAYNQLQRIDTLLYLMVYPQQPMVKTKTIELIG-----------YDKLPAGQNATVAIMSYSGYDIEDALVLNKSSIDRG 794          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPOB1_METTH (DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum GN=rpoB1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.877e-23
Identity = 78/251 (31.08%), Postives = 119/251 (47.41%), Query Frame = 2

Query:  344 KFKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVEN------MGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGM 1078
            K K++++G  IG C++   FV              ++ I       E+ IF D GR  RPL++VE+         ++ LE    ++  L+  GIIE +  EEEE+   A           D+   + TH E+D S +LG+  GIIPFANH+ + R   ++   + QA+G   +N  +R DT +H L +PQ P+ +T I D  G           RP    GQN +V      G   ED  ++ +AS  RG+
Sbjct:    3 KTKIYINGKLIGTCENPEEFVEEMRKKRRSGEVSPEMNITHYPENHEIYIFTDPGRARRPLIIVEDGEPLLTEEHLEKLETGEMSWDDLIAAGIIEYLDAEEEENAYIAMS--------PDEINDEHTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGM-TKQALGLYASNYDLRTDTRAHLLHHPQVPIVKTRIIDVTGYD--------ERPS---GQNFVVAVMSYEGYNMEDALILNKASLERGL 233          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPOB1_METTW (DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB1 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.128e-22
Identity = 76/251 (30.28%), Postives = 118/251 (47.01%), Query Frame = 2

Query:  344 KFKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVEN------MGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGM 1078
            K K++++G  IG C +   FV              ++ I       E+ IF D GR  RPL++VE+         ++ L      +  L+  GIIE +  EEEE+   A   + + ++         TH E+D S +LG+  GIIPFANH+ + R   ++   + QA+G   +N ++R DT +H L +PQ P+ +T I D  G           RP    GQN +V      G   ED  ++ +AS  RG+
Sbjct:    3 KTKIYINGKLIGTCDNPEEFVEEIRAKRRSGEVSHEMNITHYPENHEIYIFTDPGRARRPLIIVEDGEPLLKEEHLEKLSSGEMEWDDLISQGIIEYLDAEEEENTYIAMSPEEVTEE--------HTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGM-TKQALGLYASNYNLRTDTRAHLLHHPQVPIVKTRIIDVTGYD--------ERPS---GQNFVVAVMSYEGYNMEDALILNKASLERGL 233          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPOB1_METJA (DNA-directed RNA polymerase subunit B' OS=Methanocaldococcus jannaschii GN=rpoB1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.313e-22
Identity = 76/249 (30.52%), Postives = 115/249 (46.18%), Query Frame = 2

Query:  353 VFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGK-------IKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGM 1078
            ++V+G  +G        V+           P    +  +E  +++ I  DAGRI+RPL+VVEN GK       I+ L+    TF  L+  G+IE +  EEEE+   A          E++   K TH E+D   +LG+  G+ P+  H+ A R+   +     Q++G P +N   R+DT  H L YPQ P+ RT   + LG           RP    GQN +V      G   ED  V  +++  RG+
Sbjct:   11 IYVNGKLVGTTDKPEELVNFIREKRRKGELPQYTTVAYNEESNDIHINTDAGRIVRPLIVVEN-GKPKLTKEHIEKLKKGEITFSDLVKEGVIEYLDAEEEENAYIALS--------EEELTEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRITMAAAM-GKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILG--------FDKRP---AGQNFVVAIMSYEGYNMEDAIVFNKSAIDRGL 238          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPOB1_METVS (DNA-directed RNA polymerase subunit B' OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpoB1 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.779e-21
Identity = 75/248 (30.24%), Postives = 111/248 (44.76%), Query Frame = 2

Query:  353 VFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGK------IKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGM 1078
            V+V+G  I   KD  + V                 I  +E  +++ I  D GR +RPL+VVEN         ++ +     TF+ L+  G+IE +  EEEE+   A           D+   + TH E+D   +LG+  G+ P+  H+ A R+   +     Q++G P  N   R+DT  H L YPQ PL RT   + LG           RP    GQN +V      G   ED +V+ +AS  RG+
Sbjct:    7 VYVNGKLIDTSKDPENLVKSLRIQRRSGKLSPNTSISFNEESNDIHISTDGGRAVRPLVVVENGFSKLTNELLEKVNNNELTFEYLVKTGVIEFLDAEEEENARIAM--------YNDEITFENTHVEIDPLVILGIGAGVAPYPEHNSAPRITMAAAM-GKQSLGIPMANIKWRMDTRGHLLHYPQVPLVRTKHQEILG--------FDKRP---AGQNFVVAVMSYEGYNMEDAFVINKASLERGL 234          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPC2_DICDI (DNA-directed RNA polymerase III subunit rpc2 OS=Dictyostelium discoideum GN=polr3b PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.056e-20
Identity = 86/297 (28.96%), Postives = 129/297 (43.43%), Query Frame = 2

Query:  212 NCGLVKNLGVTGLVSTSILE-PIFEQLFNSGMEKLADDASYSLGGK--FKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGK------IKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRG 1075
            NCGLVKN  +   V+T   E P+    +N G++ +       L  +  + V ++G  IG+      FV+              V I +++ Q  + +  D GR+ RP+++V++         I+ L+    TF   +  GIIE +   EE D   AW         E       TH E++   +LG   G+IP+ +H+ + R  YQ      QAIG    N   R+DTL + L + QRPL +T   D           +L   +L  G NA V      G   ED  VM +AS  RG
Sbjct:  969 NCGLVKNFALMSHVTTDDSEGPLLRLAYNLGVQDILLVTGEELNSRNAYLVLLNGQIIGIHNSPDYFVTTLRKMRRAGRIREFVSICKNKAQQTISVACDGGRLCRPVIIVDDQRPRLTQEHIEDLKDGLRTFDDFIREGIIEYLDVNEENDSFLAWR--------EAAIQPWTTHLEIEPFTMLGCVAGLIPYPHHNQSPRNTYQCAM-GKQAIGAIAYNQLTRIDTLLYLLVHTQRPLCQTRTID-----------LLNWYKLPAGHNATVAVMSYSGYDIEDALVMNKASLDRG 1245          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPO2_MIMIV (DNA-directed RNA polymerase subunit 2 OS=Acanthamoeba polyphaga mimivirus GN=RPO2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.801e-20
Identity = 104/377 (27.59%), Postives = 169/377 (44.83%), Query Frame = 2

Query:   50 GIVANLGRANPLQTLVDLRR--TRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGE-NCGLVKNL----GVTGLVSTSILEPIFEQLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMG---KIKSLEGKNYTFQALLDHG-IIELVGTEEEEDCCTAWGIKYL--LKDIEDKKPI---------------------KFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGI-QQEDPWVMERASRGRG 1075
            G+   L R N L +L  +RR  T      T K+   R+ H + +G +C L +P+G+   GLVKN+    G+T  +++ I  PI E      +  L       L    KVF++G+W+GV ++ +   +              V +  +   +E  I+ D GR++RP L V +     K + L+  N   + L     +IE V  EEE++   A   +Y+     I  KKPI                     ++THCE+    +LGL    IPF +H+ + R ++Q    + QA+G   ++   R D +S+ L++PQ PL  +  S       Y   HI P      G+N+IV      G+  QED  V+  ++  +G
Sbjct:  462 GLSQMLNRMNHLHSLSYMRRVITPTVDASTMKMTSPRHLHNTQYGSMCPLESPEGKPKTGLVKNMAMMEGITINMNSQI--PIIESYLIGKITTLESANKKRLHQYVKVFLNGNWLGVTRNIIKIHNDLRAMRFRGELSRMVGLVLNYKTAEFHIYTDGGRLIRPYLTVTDNKLNFKPEMLDEVNSWEEFLAKFPEVIEYVDKEEEQNIMLAVFPQYIQDANRIMSKKPINSRDQLNKINRTNRYDDNVYVRYTHCEIHPCMILGLISSNIPFPDHNQSPRGIFQ-YNQARQAMGLYISDYRERTD-ISYILYHPQIPLVTSRASK------YTGTHIFP-----AGENSIVAIASYTGLMNQEDSLVINDSAIQKG 823          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPOB1_HALSA (DNA-directed RNA polymerase subunit B' OS=Halobacterium salinarium GN=rpoB1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 9.883e-19
Identity = 71/261 (27.20%), Postives = 116/261 (44.44%), Query Frame = 2

Query:  350 KVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVEN------MGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGMFSFGPFKITRGK 1114
            KV+V+G  +G  ++                    V +   +   EV +  DAGR  RPLLVVEN        ++++++  +  F+ L++ G +E +  EEEED     G++      E++     TH E+D   + G+  G+IP+  H+ + R+   +     Q++G P  N  IR DT  H L YPQ+ +  T  ++ +G           RP    GQN +V      G   ED  VM + S  R +     F+   G+
Sbjct:    8 KVYVNGSLVGTHENPEELAEQIREARRRGEVSEMVNVSVRDRTGEVIVNADAGRARRPLLVVENGEPVVTQEEVEAVKNGDIDFEDLVEAGKVEFIDAEEEEDILV--GVE------EEELTTDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGM-MKQSLGLPAANYRIRPDTRQHLLHYPQKAMVNTQTTEQIGYD--------DRP---AGQNFVVAVMSYEGFNIEDALVMNKGSVERALSRSHFFRTYEGE 248          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPB2_IIV3 (Probable DNA-directed RNA polymerase II subunit RPB2 homolog OS=Invertebrate iridescent virus 3 GN=IIV3-009R PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.756e-18
Identity = 88/321 (27.41%), Postives = 144/321 (44.86%), Query Frame = 2

Query:  137 KVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILE-PIFEQLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKDS----LSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGKIKSLEGKNY-TFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGMF 1081
            K  + R  HPS    +C + TP+G+  G V N+ V   V+T I    I +Q+ + G++               + ++G   G    +    L+F++            T + I  +     + IF DAGR +RP+    ++ KI + EG+   +F+  LD+ +I  +   E      A  I   L+D+      ++   ELD   + G+  GIIPF +   + R  + S     QAIGF   + +++ +T+SH L YPQ+PL  T  ++      Y PN          G NAIV      G  QED  ++ ++S  RG+F
Sbjct:  498 KTSEIRQIHPSSSFLVCPVETPEGKGVGTVLNMAVFCQVTTGISTCEIMDQIDSFGVDLKCHCTIKDPNNCLLLLINGSPYGNGHANVIHRLNFLND-----------TNISIVVNRALGVIEIFSDAGRFIRPIF---DLDKICNFEGEIVPSFKWFLDNQLIRYIDINE----AAANSIAIELRDLSTNPNTRYNLMELDPCGMFGIVAGIIPFPDRTQSARNCFYSSM-VKQAIGFVPCH-NLKTETVSHTLNYPQKPLVTTSFAEYNQLNEY-PN----------GINAIVAIACYTGYNQEDSIILNKSSIDRGLF 787          

BLAST of DY263017 vs. ExPASy Swiss-Prot
Match: RPB2_IIV6 (Probable DNA-directed RNA polymerase II subunit RPB2 homolog OS=Invertebrate iridescent virus 6 GN=IIV6-428L PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.658e-15
Identity = 93/341 (27.27%), Postives = 141/341 (41.35%), Query Frame = 2

Query:  101 LRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVS----TSILEPIFE---QLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSXXXXXXXXXXXPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGKIKSLEGKNY-TFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGPNHILPRPELYIGQNAIVGWKGPLGIQQEDPWVMERASRGRGMFSFGPFK 1099
            LRR    +   GK    R  HPS     C   TP+G+  G+  N  +   VS    + +++ I E   Q F    E   ++    L     +FV+G   G+       +S              V         EV I  DAGR +RP+L   N+  IK+     + +FQ  L++G +      E E    A  ++ L      + P  +   E+  S +LG+    IPFA H  + R+ YQS   + QAIG    +  ++ D  +  + Y QRPL  T I++ + +    PN          G NA+V      G  QED  ++ +AS  RGMF    +K
Sbjct:  509 LRRFVIPMGKEGKNTKIRQIHPSSIFFACPSETPEGQFVGITLNFSMLAEVSIRTSSVVIKEIIEASHQAFKHVHEISLEENKQFLSKLSIIFVNGGICGLTSKPQQLLSDVRDLKLKHCLKYDVSAVFIPELKEVHISSDAGRFIRPVL---NLQSIKTNGNVMWNSFQNCLENGHVVYKDAYEIEQSQIAINLQDL-----SRYPTVYDSMEIHASCMLGVMAAQIPFAEHTQSPRLCYQSSM-AKQAIG-NIPSHHVKSDNTTRVMDYVQRPLVTTQIAE-MNRFNDFPN----------GLNAMVAVAIYTGFNQEDSIILNKASIDRGMFHVVTYK 828