DY263024

Overview
NameDY263024
Unique NameDY263024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1189
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.944e-47
Identity = 91/208 (43.75%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L DP  NK   F   E             V+S E Q  +F+ + R  +          V L K+  +  L +RNE L+Y++L+D++++  P++YTPTVG  CQ Y  +FRRP+G++ S KDKG ++ ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G  P   LP+ LDVGTNNQKLL+D  Y+GL+
Sbjct:   46 GHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQ----------VPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFISLKDKGRILELLRNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTNNQKLLDDEFYIGLK 243          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 2.539e-47
Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L DP  NK   F   E              IS + Q  + M + R  +          + L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +F+RP+G+Y S K+KG+++ ++ NWP + + +IV+TDG RILGLGDLG QGIGIP+GKL +Y A  G  P   LPV +DVGTNN++LL+D  Y+GLR
Sbjct:   52 GYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQ----------LPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQKSIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEQLLKDEFYIGLR 249          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.539e-47
Identity = 89/208 (42.79%), Postives = 129/208 (62.02%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L DP  NK   F   E             V++ + Q  + M + R  E          V L +++ +  L +RNE L+Y++LI+NI++  PI+YTPTVG  CQ Y  +F+ P+G+Y S KDKG+++ ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G  P   LP+ +DVGTNN+K+L D  Y+GLR
Sbjct:  108 GYSLLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYE----------VPLQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEKMLNDEFYIGLR 305          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 5.657e-47
Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L DP  NK   F   E             V+S + Q  + M + R             V L ++  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FR+P+G+Y S KDKG+++ ++ NWP + + +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G  P   LP+ +DVGTNN++LL D  Y+GLR
Sbjct:  100 GYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYS----------VPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLR 297          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.260e-46
Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L DP  NK   F   E             V + E Q  + M S R  +          V L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FRRP+G+Y S K+KG+++ ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G  P   LP+ +DVGTNN+KLL +  Y+GL+
Sbjct:   52 GYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQ----------VPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLANEFYIGLK 249          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.646e-46
Identity = 93/211 (44.08%), Postives = 129/211 (61.14%), Query Frame = 1
Query:  313 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH 945
            K+G ++L DP  NK   F L E              +  + Q    +++F  L  +          L ++ +L  L DRNE L+Y+VL  +I+ F PI+YTPTVGL CQ+Y   FRRPRG++ +  D+G + +M+ +WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G  P + LPVMLDVGT+N+ LL+D LY+GLRH
Sbjct:    2 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSD----------LDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRH 202          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.150e-46
Identity = 94/211 (44.55%), Postives = 127/211 (60.19%), Query Frame = 1
Query:  313 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH 945
            KRG ++L DP  NK   F L E              +  + Q    +++F  L  +          L ++ +L  L DRNE L+Y+VL  +I+ F PI+YTPTVGL CQ Y   FRRPRG++ +  D+G + +M+ +WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G  P   LPVMLDVGT+N+ LL+D LY+GLRH
Sbjct:    2 KRGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSD----------LDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHECLPVMLDVGTDNEALLKDPLYIGLRH 202          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.808e-46
Identity = 95/211 (45.02%), Postives = 130/211 (61.61%), Query Frame = 1
Query:  310 HKRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            H+RG  +  +P  NKD  F L E               S E Q  R +++F  L  + +          ++ +L  L DRNE L+YRVL  +I+ F PI+YTPTVGL CQ YS +FR+PRG++ +  D+G + S++  WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G +PQ  LPV+LDVGT N++LL+D LY+GLR
Sbjct:   12 HQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFD----------RYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLR 212          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 8.169e-46
Identity = 97/213 (45.54%), Postives = 130/213 (61.03%), Query Frame = 1
Query:  313 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKG--EMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH 945
            KR  ++L +P  NK  GF L E              ++ EQQ  R +   R        QPN    LA++  L+ L DRNE L+YRV+ D++K+  PI+YTPTVGL CQN+  ++R+P+G+Y +  D    ++  ++ NW  + V  IV+TDG RILGLGDLG  GIGIP+GKL +YVA  G  P+  LPV+LDVGTNN  LL D  Y+GLRH
Sbjct:   75 KRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLRE-------QPN---DLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRH 277          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.915e-45
Identity = 92/208 (44.23%), Postives = 127/208 (61.06%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +   P  NKD  F L E              IS + Q  R +++F  L  + +          ++ +L  L DRNE L+Y+VL+ +I+ F PI+YTPTVGL CQ YS  FR+PRG++ S  D+G + S++  WP   +  +V+TDG RILGLGDLG  G+GIP+GKL +Y A  G +PQ  LPV+LDVGT N++LL+D LY+GLR
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFD----------RYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLR 198          
The following BLAST results are available for this feature:
BLAST of DY263024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_MESCR1.944e-4743.75NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_POPTR2.539e-4743.27NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR2.539e-4742.79NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ5.657e-4742.79NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_VITVI1.260e-4643.27NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_COLLI1.646e-4644.08NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_ANAPL2.150e-4644.55NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_HUMAN2.808e-4645.02NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOM_ASCSU8.169e-4645.54NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_PIG6.915e-4544.23NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10CD12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263024 ID=DY263024; Name=DY263024; organism=Citrus clementina; type=EST; length=1189bp
CAAGAATTATATTATGGTCAAAAGTTAAAAATATAAAAATAAAAAAATTA
ACAAAGAAAAAGAGAAACCGAATCCCTATAAATTGACTAACAAACGCTTA
CACAACGCAGTCCTTTTGTCAAAATCTAAAACGATGCAATTAAAGTGGAC
TTTATAGTTTGTGTTATTGTTTTAGATCTTTTCCGGAAAGCCTTTTTGTT
CTTTGGCTTAGATCTTGACGCGGAAATGTGGAATCTTGCTCGAGTTGCCG
CGTCCGTATTAAGCCGATCGAGGCGATTCTCGACGGCGATTCCTGGTCCC
TGTATGGTTCACAAACGCGGCACTGATATTCTTCATGATCCCTGGTTCAA
CAAGGATACTGGCTTTCCTTTGACTGAAAGAGACCGACTGGGGCTCCGTG
GCCTCCTCCCACCCCGCGTGATATCATTCGAGCAGCAATATGCTCGTTTC
ATGGAATCATTCCGATCATTAGAGAAAAATACTGAGGGTCAACCAAATAA
AGTTGTATCATTAGCAAAGTGGAGGATCTTGAACAGACTGCATGACAGGA
ATGAAACATTATACTACAGAGTCCTGATTGATAACATCAAAGATTTTGCT
CCAATTATATACACTCCAACTGTTGGATTGGTTTGTCAGAATTATTCAGG
TTTGTTTAGACGTCCCCGTGGAATGTATTTCAGTGCAAAGGATAAGGGGG
AGATGATGTCTATGATCTACAATTGGCCTGCTCAACAGGTAGATATGATA
GTCCTAACGGATGGAAGTCGTATTCTTGGCTTAGGCGACCTTGGAGTTCA
GGGAATTGGAATTCCTATTGGAAAGCTGGATGTGTATGTGGCTGCTGCAG
GCATNCATCCACAGAGAATTCTCCCGGTTATGCTTGATGTTGGCACTAAC
AATCAAAAGCTGCTTGAAGACCGTCTATATTTGGGACTCCGACACCTAGG
CTAGAAGGAGAAGATATCTATCAATTGGTGATGAATCCTGAAAGCTGTTC
ACGCACGTTGGCCAAAGCTAATGGACAGTTCGAGGACTTCCAAAGGAAGT
GGGGCTTTGAAACTTTGGAACGAAATTCGAAAAAGGGTTTGTTAGGTTAA
GGATGAAAAACAGGGAAAGGGGGGGGGGTGCCTTTGGGGGAATTAATGGG
AAGTGGTGCAAAAACCCAGGGCCCTTCCATTGACTTGGA
back to top