DY263024

Overview
NameDY263024
Unique NameDY263024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1189
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.472e-43
Identity = 86/208 (41.35%), Postives = 125/208 (60.10%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLR 942
            G  +L +P +NK   F   E             VIS + Q  + M S R  +          V L ++  +  L + NE L+Y++LIDN+++  PI+YTPTVG  CQ Y  +F+RP+G++FS K+KG++  ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G  P   LPV +DVG    K ++D  Y+GLR
Sbjct:   36 GFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYD----------VPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGWIFKRPQGLFFSLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVG-QTMKFVDDEFYIGLR 232          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.472e-43
Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ +NI +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    + R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKDRYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.472e-43
Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ +NI +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    + R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKDRYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.472e-43
Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ +NI +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    + R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKDRYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.472e-43
Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ +NI +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    + R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKDRYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.104e-42
Identity = 90/211 (42.65%), Postives = 127/211 (60.19%), Query Frame = 1
Query:  307 VHKRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGL 939
            + ++G  ++ +P  NK   F L E             + + + Q  RF    R+L+K T         L K+  +  + +RNE L+YR+L D+I+   PI+YTPTVGL C  Y  +FRRP+G++ S  D+G + S++ NWP   V  +V+TDG RILGLGDLGV G+GIP+GKL +Y A AG  P R LPV +DVGT+N  LL+D  Y+GL
Sbjct:   21 IKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRF---HRNLKKMTS-------PLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGL 221          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.442e-42
Identity = 94/225 (41.78%), Postives = 133/225 (59.11%), Query Frame = 1
Query:  286 AIPGPCM-----VH--KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGL 939
            A+  PC      VH  ++G  ++ +P  NK   F L E             + + + Q  RF    R+L+K T         L K+  +  + +RNE L+YR+L D+I+   PI+YTPTVGL C  Y  +FRRP+G++ S  D+G + S++ NWP   V  +V+TDG RILGLGDLGV G+GIP+GKL +Y A AG  P++ LPV +DVGT+N  LL+D  Y+GL
Sbjct:    7 AVTTPCTLTCRRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRF---HRNLKKMTS-------PLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGL 221          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.442e-42
Identity = 100/268 (37.31%), Postives = 145/268 (54.10%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ ++I +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    ++R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKERYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.442e-42
Identity = 100/268 (37.31%), Postives = 145/268 (54.10%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ ++I +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    ++R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKERYCCFNDDIQG 270          
BLAST of DY263024 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.442e-42
Identity = 100/268 (37.31%), Postives = 145/268 (54.10%), Query Frame = 1
Query:  319 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGXHPQRILPVMLDVGTNNQKLLEDRLYLGLRH--LG*KEKISINW**ILKAVHARWPKLMDSSRTSKGSGALKLWNEIRKRVC*VKDEKQG 1116
            G  IL  P  NK + F   E             + + E+Q +R  + FRS   +          L K   L  + D NETL+YR++ ++I +  PIIYTPTVGL C+ +S  +RR RG++ S  +K  +  ++ N   Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y +  G  P   LP+ LDVGT+N +LLED +Y+G RH  +G +E         ++AVH RWP  +          A+ +    ++R C   D+ QG
Sbjct:   14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIE-AFMQAVHVRWPDTLIQFEDFAQKNAMPILERYKERYCCFNDDIQG 270          
The following BLAST results are available for this feature:
BLAST of DY263024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOC_SOLLC6.472e-4341.35NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAO1_SHEB96.472e-4337.69NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB86.472e-4337.69NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB56.472e-4337.69NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB26.472e-4337.69NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAOM_HUMAN1.104e-4242.65NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOM_MOUSE1.442e-4241.78NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAO1_SHESR1.442e-4237.31NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.442e-4237.31NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEON1.442e-4237.31NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CD12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263024 ID=DY263024; Name=DY263024; organism=Citrus clementina; type=EST; length=1189bp
CAAGAATTATATTATGGTCAAAAGTTAAAAATATAAAAATAAAAAAATTA
ACAAAGAAAAAGAGAAACCGAATCCCTATAAATTGACTAACAAACGCTTA
CACAACGCAGTCCTTTTGTCAAAATCTAAAACGATGCAATTAAAGTGGAC
TTTATAGTTTGTGTTATTGTTTTAGATCTTTTCCGGAAAGCCTTTTTGTT
CTTTGGCTTAGATCTTGACGCGGAAATGTGGAATCTTGCTCGAGTTGCCG
CGTCCGTATTAAGCCGATCGAGGCGATTCTCGACGGCGATTCCTGGTCCC
TGTATGGTTCACAAACGCGGCACTGATATTCTTCATGATCCCTGGTTCAA
CAAGGATACTGGCTTTCCTTTGACTGAAAGAGACCGACTGGGGCTCCGTG
GCCTCCTCCCACCCCGCGTGATATCATTCGAGCAGCAATATGCTCGTTTC
ATGGAATCATTCCGATCATTAGAGAAAAATACTGAGGGTCAACCAAATAA
AGTTGTATCATTAGCAAAGTGGAGGATCTTGAACAGACTGCATGACAGGA
ATGAAACATTATACTACAGAGTCCTGATTGATAACATCAAAGATTTTGCT
CCAATTATATACACTCCAACTGTTGGATTGGTTTGTCAGAATTATTCAGG
TTTGTTTAGACGTCCCCGTGGAATGTATTTCAGTGCAAAGGATAAGGGGG
AGATGATGTCTATGATCTACAATTGGCCTGCTCAACAGGTAGATATGATA
GTCCTAACGGATGGAAGTCGTATTCTTGGCTTAGGCGACCTTGGAGTTCA
GGGAATTGGAATTCCTATTGGAAAGCTGGATGTGTATGTGGCTGCTGCAG
GCATNCATCCACAGAGAATTCTCCCGGTTATGCTTGATGTTGGCACTAAC
AATCAAAAGCTGCTTGAAGACCGTCTATATTTGGGACTCCGACACCTAGG
CTAGAAGGAGAAGATATCTATCAATTGGTGATGAATCCTGAAAGCTGTTC
ACGCACGTTGGCCAAAGCTAATGGACAGTTCGAGGACTTCCAAAGGAAGT
GGGGCTTTGAAACTTTGGAACGAAATTCGAAAAAGGGTTTGTTAGGTTAA
GGATGAAAAACAGGGAAAGGGGGGGGGGTGCCTTTGGGGGAATTAATGGG
AAGTGGTGCAAAAACCCAGGGCCCTTCCATTGACTTGGA
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