DY263032

Overview
NameDY263032
Unique NameDY263032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1318
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.249e-14
Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  314 PPSYLNSCSASGDEKKPKRQRK-NLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEE 565
            PPS   S   S   K     RK   YRG+R+R WGKW +EIR P+ G R+WLG+++  E+AARAYD     IRG+K   NFP ++
Sbjct:    2 PPSPPKSPFISSSLKGAHEDRKFKCYRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPTDK 86          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.249e-14
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 2
Query:  368 RQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            R+R   Y+GIR R WGKW AEIR+P K  R+WLG+++T E AARAYD     +RG  A++NFP
Sbjct:   15 RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFP 77          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.249e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  386 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            +RG+RQR WG W +EIR P    R+WLGTF TAE+AARAYD+ AR + G +A+ NFP
Sbjct:    8 FRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.249e-14
Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 2
Query:  218 SPFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSAS-GDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNF 553
            +PF +T   P +F S     +H+S         P   +SC       KK +  R  +YRG+RQR  GKW  E+R+P K  R+WLGTF T E AARA+D  A  +RG+ A +NF
Sbjct:    2 NPFYST--FPDSFLSI---SDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.543e-14
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 2
Query:  329 NSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            +S S+S  + K K+ +   Y+G+R R WG W +EIR P +  R+WLG+++TAE AARAYD     ++G +A +NFP
Sbjct:   31 SSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFP 106          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.235e-13
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2
Query:  386 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            +RG+RQR WG W +EIR P    RVWLGTF+TAE AARAYD+ A  + G+ AK NFP
Sbjct:    7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 63          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.235e-13
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 2
Query:  386 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            +RG+RQR WG W +EIR P    RVWLGTF TAE AARAYD+ A  + G+ AK NFP
Sbjct:    7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.613e-13
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  365 KRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 556
            K +R+  ++GIR R WGKW AEIR+P K  R+WLG+++T E AARAYD     +RG  A +NFP
Sbjct:   14 KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.106e-13
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  356 KKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNF 553
            K+ K+ ++  Y G+R+RPWG++AAEIR+P    R WLGTF+TAEEAA AYD  AR I G  A  NF
Sbjct:   11 KEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNF 76          
BLAST of DY263032 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.106e-13
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 2
Query:  356 KKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP-NEEDVFTV 580
            ++ K+     + G+R+RPWG++AAEIRDP    R WLGTF+TA EAA AYD+ A  +RG +A+ NF     DV T+
Sbjct:   26 RRSKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDVHTI 101          
The following BLAST results are available for this feature:
BLAST of DY263032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
ERF15_ARATH3.249e-1447.06Ethylene-responsive transcription factor ERF015 OS... [more]
ERF10_ARATH3.249e-1455.56Ethylene-responsive transcription factor ERF010 OS... [more]
ERF03_ARATH3.249e-1459.65Ethylene-responsive transcription factor ERF003 OS... [more]
DRE1D_ARATH3.249e-1440.71Dehydration-responsive element-binding protein 1D ... [more]
ERF12_ARATH5.543e-1444.74Ethylene-responsive transcription factor ERF012 OS... [more]
SHN3_ARATH1.235e-1361.40Ethylene-responsive transcription factor SHINE 3 O... [more]
SHN2_ARATH1.235e-1361.40Ethylene-responsive transcription factor SHINE 2 O... [more]
ERF11_ARATH1.613e-1353.13Ethylene-responsive transcription factor ERF011 OS... [more]
ERF88_ARATH2.106e-1356.06Ethylene-responsive transcription factor ERF088 OS... [more]
ERF86_ARATH2.106e-1348.68Ethylene-responsive transcription factor ERF086 OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CE08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263032 ID=DY263032; Name=DY263032; organism=Citrus clementina; type=EST; length=1318bp
CCACGATCAAATTAATTCGTAAAACCCTTTGAGTTCTCTCGCATCTTCTT
TTCTCTTAATAATCGCCAAAACCACAGCCTGACCTGATCGCTAGTTTAGT
TTCAGTGCTTTATTATTACATTTACTTGCGGAAAGAATGTGTGGCGGTTC
TATCTTAGGAGACTTCTTTCCTCGCCACGGCGGCAGCCGCGTCACCGCTT
CCGACCTCTGGCCCAACTCACCCTTCGCTGCTACTAAACAACTCCCTCAC
AACTTTGAATCTACTCCGTTCTCCGATGAACACCAGTCACTGGCCAAAAT
CAAACGCCCTCAACCCCCTTCATATCTAAACTCCTGTTCAGCTTCAGGTG
ATGAGAAAAAGCCCAAGAGGCAGAGGAAGAATCTCTACAGGGGAATAAGG
CAACGCCCCTGGGGCAAATGGGCAGCTGAGATTCGTGACCCAAGGAAAGG
AGTTCGAGTCTGGCTCGGCACATTCAACACTGCCGAAGAAGCAGCTCGAG
CCTATGACAAAGAAGCCCGCAAGATTCGCGGCAAGAAAGCCAAAGTCAAC
TTCCCCAACGAAGAGGACGTCTTCACCGTCACCCCTGCTGCTGCCGCCCA
TGCTTACCATCATCATCAGCATAATCATAATCCCACTCCCAGTCCCCTTC
CTTCTCTTTCCCAAGAAGATCTTTTTAGTCGTAATAACTCATCTATAAGT
AGTGTTGGTTTTGACTTGTATGGTTATGATCTGAACCCCCAGATTGTTAC
TTCTGGTGGTGACGAGAATTCCGGGACTGGTTCTGGTTCTGTTTCAGAAG
GTGGGTACGATTCCACAGAACTTATGCTGAATTGNCACCAGAATGTCAAT
GATGGTTCGTTTGCTCAAATGAAGGTGAAAAGCGAAGAACAAGAAGAAGA
AGAAAAGCGAAAAGCTGAAGAGGAAGAGAACGAAGTGCGAAAGCTGTCTG
AGGAGCTTATGGCGTACGAGAATTTCATGAAGTTCTATCAGCTTCCGTAT
CTCCATGGGCCATCACCGTTGTCTAAAAATAATATAAATAATAATAAAAT
TAATATTGTTCCCAAAAGGGGTTGTCGGTAAACTTTTGGAACTTTTAAGG
AAGTTAATGGTTCCCCCGGCCCCCTGGCAAATCCAAGGCCCCGGAAACGG
GGGTTCCTTGAAATAATTTGGTAATCCCCGGAATTTCCTTTTTTAAATTT
TTTTTGTTAAAACCCCGGAAATTTTTTTTTTTTTTATTTAAAGAGGGGGG
AAAAAAAAATCTCCGGGGGGGCAATTGTAAAAAAAAAACCCTCGGCGGGG
GGGTTTTTTTGAAAATAA
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