DY263043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.010e-15 Identity = 58/227 (25.55%), Postives = 98/227 (43.17%), Query Frame = 3 Query: 438 EAGVVLAPSDYV-----FKITSTIFSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKIKSQNGNI 1103 EA + PS V + ++ GPCK + + G + P P + + W+ FY +++ G G +G G ++ +R P IRF +N ++ +T ++S FH+ C+ + +++L I +P SPNTDGIH+ ++ V I T + + G + I E+ G HGI G+ G ++ V IK N I Sbjct: 55 EACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN----WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKL-------PVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.010e-15 Identity = 57/204 (27.94%), Postives = 91/204 (44.61%), Query Frame = 3 Query: 474 FKITSTIFSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDS-PALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKI 1082 F + F+GPCK + Q+DG L+ + W+ ++D++ TGKG ++G G W N T C P + +N VSG+T+ NS FHM C+ ++I +++++P SPNTDGIH+ ++ + I + + G K +I V G HGI G+ G + V I Sbjct: 83 FLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK---DHGNWIEILRVDNLVITGKGNLDGQGPAVWS--------KNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 275
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 6.547e-15 Identity = 65/241 (26.97%), Postives = 96/241 (39.83%), Query Frame = 3 Query: 351 DVRDYGAVGDGSXXXXXXXXXXXXXXXXVEAGVVLAPSDYVFKITSTIFSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTG-KGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDS-PALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGG-PNSQ 1064 DV+ GA GD + + + +Y+ + S F GPCK + +L+G P T W+ F + D T G K +G G W N +G C+S P IRF +N ++ +T NS FHM C+ + + + I +P S NTDGIHI + V + T + + G + + V G HGI G+ G PN Q Sbjct: 71 DVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITVPKGEYM--VESLEFKGPCKGPVTLELNGNFK---APATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKA--------NDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQ 298
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.551e-15 Identity = 57/208 (27.40%), Postives = 87/208 (41.83%), Query Frame = 3 Query: 474 FKITSTIFSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDS-PALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKIKSQN 1094 FK+ T+ +GPCK + F L G + G + +W+VF K++ G GT +G G W N + C P +RF N + +T ++ FH + + D + I +P SPNTDGIH+ + V I AT + + G + I +V G HGI G+ G + V I +N Sbjct: 62 FKLGETVMTGPCKSPIEFTLQGNVKTDGG-----STQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKA--------NNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKN 256
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.459e-14 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 561 PDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDSPALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKIKSQN 1094 P+ + S K W+ F + D++ G G ++ G W CK + G N P + +L+ F S+N+ +SGLT NS +FH+ D V ID + +S+ + SPNTDGIH+E++ SV I T + + G+ I + G HGI G+ G + GV + N Sbjct: 103 PEDFRIIASSKHWIWFEDVTDVSIYG-GILDAQGTSLWK--CKNNGGHNC-----PTGAKSLV-FSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSN 271
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.459e-14 Identity = 55/197 (27.92%), Postives = 88/197 (44.67%), Query Frame = 3 Query: 495 FSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGPCDS-PALIRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKI 1082 F+GPCK + Q++G L+ + W+ ++D++ TGKG ++G G W N C P + +N VSG+T+ NS FHM C+ ++I +++++P SPNTDGIH+ ++ V I + + G K +I V G HGI G+ G + V I Sbjct: 90 FTGPCKGDVTIQVNGNLLATTDLSQYK---DHGNWIEILRVDNLVITGKGKLDGQGPAVWS--------KNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 275
BLAST of DY263043 vs. ExPASy Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.905e-14 Identity = 58/212 (27.36%), Postives = 93/212 (43.87%), Query Frame = 3 Query: 474 FKITSTIFSGPCKPRLVFQLDGVLMPPDGPDTWPKADSRKQWLVFYKLDDMTFTGKGTIEGNGQPWWDLPCKPHRGPNGSTSSGP-CDSPAL-IRFFMSSNLVVSGLTIQNSPQFHMKFDGCEGVMIDKLSISSPKLSPNTDGIHIENTKSVGIYIP**ATVTNAFQLKRGAQKWDIGEVPWGASHGIRHGNPGGPNSQAGVPKIKSQNGNI 1103 F + GPCK + QL G L P P W+ K+D +T G G +G G+ W N +GP C + ++ +R + +N ++ +T +S FH+ GC+ + ++ IS+ + S NTDGIHI + V I T + L G++ +I + G HGI G+ G ++ V I +N I Sbjct: 29 FAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG----WINLNKIDLLTIFGGGVFDGQGKSAWV--------QNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTI 228 The following BLAST results are available for this feature:
BLAST of DY263043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263043 ID=DY263043; Name=DY263043; organism=Citrus clementina; type=EST; length=1321bpback to top |