DY263054

Overview
NameDY263054
Unique NameDY263054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1362
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_BACSK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.331e-18
Identity = 55/165 (33.33%), Postives = 90/165 (54.55%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934
            RI+ +G  +   V   +VA++++LQ  DP+  I LYINS G         G  + G AIYDT+  +K +V T+ +G A  M   LL AG KGKR  +P++++MI QP     G   A+D+ I A+  +  R+ L +++ + +G   E + +  +     T E+A+
Sbjct:   28 RIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPG---------GSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQG--QAADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAK 181          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THICR (ATP-dependent Clp protease proteolytic subunit OS=Thiomicrospira crunogena (strain XCL-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931
            R++++   +   +  L+VA+L++L+  +P   I+LYINS G         G  + G AIYDT+  +K +V T+ +G A  M   LL+AG +GKR+ +P++++MI QP     G   ASD+ I AKE +  +  L K L  HTG   E +    +     + ++A
Sbjct:   35 RVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPG---------GSVTAGMAIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYALPNSRVMIHQPLGGFQG--QASDIEIHAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNFMSADEA 187          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPZ (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPM (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M28 GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPG (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPF (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPD (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPC (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRPB (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_STRP8 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pyogenes serotype M18 GN=clpP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.738e-18
Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901
            RI+ +  P+   +   V+A+L++L   D    IYLY+N+ G         G  S G AI DT+  +K +V T+ +G A  M  ++ ++GTKGKRFM+P+A+ MI QP   + G    +D+ I A+  +  R  L K+L Q+ G + + + K  E
Sbjct:   26 RIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAE 170          
The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_BACSK1.331e-1833.33ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THICR1.738e-1833.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPZ1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPM1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPG1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPF1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPD1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPC1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRPB1.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRP81.738e-1834.42ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bp
ATCAAAGTTCAAAACTACAAAAGCACAATCAAAACAGAACTCACCCATTT
AATTAGAAATAAACAAAAAATAAAAAGCTATGTCGACGAGTTTCCTGCAA
GCGCCCATGGCGGCTTTAGTCCCGTCAACTTCAGTTCATTCTCTTAGAAG
CAAAAGCACCCGAAGTTTGAAGACCTTTTGCTCAGCTAAAATTCCCAATC
CCATGCCAGCACACATTAATCCTAACGACCCCTTTCTTTCTAAGCTCGCC
GCTGCCGCGGCAGCCTCCCCGGAAGCGTTTGTTAATCGTCCTTCCAATTC
CGGTACGCTGCCGTATTTGGATATCTACGATTCTCCCACTCTTATGGCCT
CCCCTGCCCAAGTGGAAAGATCGGCTTCATACAATGAACATAGGCCAGAT
ACACCGCCTCCGGATTTGCCTTCGCTGCTTCTTCATGGGAGGATTGTATA
CATTGGCATGCCGTTGGTGCCTGCTGTCACAGAGCTTGTTGTGGCAGAAC
TGATGTACTTGCAGTGGATGGATCCCAAGGCACCTATATATCTTTATATT
AATTCCACGGGTACAACTCGTGATGATGGTGAATCGGTTGGGATGGAGAG
TGAAGGCTTTGCCATTTATGATACATTGATGCAAATGAAGTGTGAGGTAC
ATACAGTTGCTGTTGGAGCTGCTATAGGCATGGCTTGTCTACTACTTGCT
GCTGGAACTAAAGGAAAACGATTTATGATGCCTCATGCCAAAATCATGAT
TCAGCAACCTCGTCTTCCATCATCTGGGTTGCTGCCCGCTAGTGATGTTC
TTATTCGTGCAAAAGAGGCAATGGTAAACAGAGACACACTTGTAAAACTT
CTGGGCCAGCACACTGGAAATTCAGAGGAGTTTGTGACTAAAACATTAGA
AGAACATATCATATGGACTCTAGAAAAAGCCAGGAATTTGGAGTCATCGA
CAAGGGTCTCTGGCGTGGTCAGGGAACTATTTAGGGCGGAAGTTGCTCCT
CCCAAGGATTGGGATAAGAATGGCTGGGATTAAAGTTGGAAAATAATTTT
GATTTTAATTTCTTCCTGGGAAACTTATCGCAGGGAGAAAGTTTGAAAAT
CTTAAAGGCTCTCCGAAAAATCACCCAGGAATTTTTTGAAGCTTATTTAT
CTTTAAAACAATTAACTCCTAAGGGAAAATTCAAAAAACGGCCCGAAAAA
AAAGGGACCCCAATGAAAGCCAAATCAAAAAAAGGGAAGTTTAAAAATAA
GGGAATTTTGGGATATATCTTTTGGAGGGTTTTTCCCCTTTTTTTATTTG
GAATTATAAATAAATATTATTTGTGGTTACCAACAAAAAAGAAGGGGGGT
TCCTTTTAAAAA
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