DY263081

Overview
NameDY263081
Unique NameDY263081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_POLSQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=sucC PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.345e-57
Identity = 122/278 (43.88%), Postives = 170/278 (61.15%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   LL  + + VP G  A S  EA K A+ +GG   V+KAQ+ AGGRGKG       GGV++  S  E    A +++G +L T QTG  G+  N + I D    ++E+Y +I+ DR +Q  VI+ASS+GGMDIE VA+ HPE II   +D   G+TD     +A  +G  E  I  A+D  + LYK + + DA+ +EINPL    + ++ A+DAK NFD NA FR  E+  +RDI +ED  E++ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    1 MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKLGGPVWVVKAQIHAGGRGKG-------GGVKLARSMDEVKKYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYFSIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIVAKGIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGKIKALDAKFNFDPNALFRHPEIVAYRDIDEEDAAEIEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 27.335 bits (59), Expect = 1.345e-57
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD  +L GG  +     +GGGAT E + + F+
Sbjct:  267 GLAMATMDTIKLFGGEPANF-LDVGGGATAEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.753e-57
Identity = 113/276 (40.94%), Postives = 170/276 (61.59%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +++ YGI VP+  +  +  EA + A D+G E   +KAQ+ AGGRGK        GGV++  S  E    A+ ++   LITKQTG  G++ N V I +     +E YL+  +D  +   V++ S +GGMDIE VA++ P  I    ID   G+    AR +A  +G +E C+++A   I  +Y++FMEKD + +EINPL  T +H+V+A+D K+ FDDN+  R  E+  +RD+T+EDP EV+ +K  L++I L  +IGC+VNGAGL +A
Sbjct:    3 IHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDLGCEVIAVKAQIHAGGRGKA-------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGINEACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVALDCKVCFDDNSLCRHPEILKYRDLTEEDPREVQASKYDLSYISLSGNIGCMVNGAGLAMA 271          

HSP 2 Score: 25.7942 bits (55), Expect = 1.753e-57
Identity = 13/38 (34.21%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD+    GG  +     +GGGAT E +++ F+
Sbjct:  267 GLAMATMDMIDHFGGAPANF-LDVGGGATAEKVKEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_CHLL2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=sucC PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.286e-57
Identity = 116/280 (41.43%), Postives = 172/280 (61.43%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDI----GGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +L+ +G+ VP+G VA S  EA++ A+ +    G    V+KAQ+ AGGRGK        GGV++  SP EA  +A QM+G  L+T QTG  G+  + + + +     REFY+ I +DR++   V++ S++GGM+IE VA+E P+ ++   +D   G+    AR  A  LG   +   +A   I  LY  +M  DA+  EINPL  T + +VLA+DAK+NFD NA FR K   + RD  +EDP EV+ +K  LN+++LD ++GC+VNGAGL +A
Sbjct:    3 IHEYQGKDILKKFGVSVPRGIVAFSPDEAKQAAQQLFEEQGSPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEAMEIARQMLGATLVTHQTGPEGKQVSRLLVEEGMNIDREFYVGITLDRSTSRNVLMVSTEGGMEIEKVAEETPDKLLKIQVDPLYGLQGFQAREAAFFLGLEGEQFRNAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFRHKNFLELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMA 275          

HSP 2 Score: 35.8094 bits (81), Expect = 2.286e-57
Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD+ QL GGR +     +GGGA+PE + +GF+
Sbjct:  271 GLAMATMDMIQLAGGRPANF-LDVGGGASPETVEEGFK 307          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_RHOFD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=sucC PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.286e-57
Identity = 119/278 (42.81%), Postives = 172/278 (61.87%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   +L   G+ VP+G  A +  EA + A+ +GG   V+KAQ+ AGGRGKG       GGV++  S  E   LA +++G +L+T QTG  G+    + I D    ++E+Y++ + DRASQ   ++ SS+GGM IE VA + PE IIT  +D   G+T   A  +A  +G        A D +QK+YKV+M+ DA+ +EINP+    +  + A+DAK NFDDNA FR  E+  +RD+ +EDP EV+ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    1 MKIHEYQGKEILRQAGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKG-------GGVKLARSIDEVKKLAGEILGMQLVTHQTGPEGQKVRRLLIEDGADIQKEYYVSAVTDRASQRVAMIVSSEGGMSIEDVAHDTPEKIITEIVDPATGLTVAQATKLANAIGVPAGSTAQAVDVLQKVYKVYMDTDASLVEINPMILEGNGNIKAIDAKFNFDDNALFRHPEIVAYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 27.7202 bits (60), Expect = 2.286e-57
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD  +L G   +     +GGGATPE + + F+
Sbjct:  267 GLAMATMDTIKLFGASPANF-LDVGGGATPEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_DECAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Dechloromonas aromatica (strain RCB) GN=sucC PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.286e-57
Identity = 119/278 (42.81%), Postives = 174/278 (62.59%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   +L+ +G+ VP+G   T+  +A K A+ +GG+  V+KAQ+ AGGRGKG       GGV+V  S  +    A Q++G +L+T QTG  G+    + I +    + E+Y+A L DRA+Q   I+AS +GGMDIE VA + PE I+   ++   G+TD+ A  +A  +G +E  I    +T++ LY  +ME DA+  EINPL    D  V A+DAK NFD NA +RQ E+   RD+ +EDP+EV+ ++  L +I LD +IGCLVNGAGL +A
Sbjct:    1 MKIHEYQGKQILKKFGVTVPRGIHCTTVEDAVKAAETLGGKVWVVKAQIHAGGRGKG-------GGVKVATSLEKVREYAGQILGMQLVTHQTGPEGQKVRHLLIEEGADIKHEYYVAALTDRATQSVAIMASYEGGMDIEEVAHKTPEKIVKVFVNPLVGLTDEQALTLAKGMGMNEASIPQCIETLKSLYTCYMETDASLAEINPLIHEGDGTVKALDAKFNFDSNALYRQPEIVAMRDLDEEDPDEVEASQFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 25.7942 bits (55), Expect = 2.286e-57
Identity = 16/45 (35.56%), Postives = 24/45 (53.33%), Query Frame = 3
Query:  987 GAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            GA PANFL+   G    K++      +  +P+  G +L N FGG+
Sbjct:  280 GAEPANFLDVGGGATTEKVT-EAFKIMLKNPKVKG-ILVNIFGGI 322          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRAJA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium japonicum GN=sucC PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.977e-57
Identity = 121/279 (43.37%), Postives = 170/279 (60.93%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++ ALL  +G+ + KG      A+AE  AK + G   V+K+Q+ AGGRGKG F     G KGGVR+  S  E S  A QM+G  L+T QTG AG+  N ++I D     +EFYL++L+DR +     V S++GG++IE VA   PE I+T  +D   G+     R +A  L  S    + A+    +LY  F+ KD + +EINPL  T   Q+  +DAK++FDDNA FR  EV   RD T+ED +E++ +K  LN++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKALLGEFGVPISKGVPVLKAADAEAAAKALPGPVYVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQVNRLYIEDGSDIDKEFYLSLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPATGIMGHHGRTVANALKLSGDLAKQAEKLTAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEEDAKEIEASKYDLNYVTLDGNIGCMVNGAGLAMA 281          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_MYXXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Myxococcus xanthus (strain DK 1622) GN=sucC PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.981e-57
Identity = 115/278 (41.37%), Postives = 171/278 (61.51%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   +   YG+  PKG +A S  +AE  AK++G    V+KAQ+ AGGRGKG       GGV++  SP EA  LA QM+G KL T QTG  G+  + V+I +     +E YL + +DRA+     +AS +GG++IE VA++HPE I+   +D   G  D   R +A  LG +   +         LY++FM+ DA+ +EINPL    D  V+A+DAK+ FD+NA +R K++ ++RD+ +E+P E++  +  L +I LD +IGC+VNGAGL +A
Sbjct:    1 MKIHEYQGKEIFRKYGVPTPKGILAVSANDAEAAAKELGTSVVVVKAQIHAGGRGKG-------GGVKLAKSPAEAKELAKQMLGMKLKTIQTGPEGQTVHKVYIEEGLAIGQELYLGVTLDRATSRITFMASREGGVEIEEVAEKHPEKILRESVDPAVGFQDFQGRKLAFGLGLTGPTVNKFTQFCSALYRMFMDTDASLVEINPLVILKDGGVVALDAKVTFDENALYRHKDLLEYRDLAEEEPREIQAKEWDLAYIALDGNIGCMVNGAGLAMA 271          

HSP 2 Score: 26.1794 bits (56), Expect = 2.981e-57
Identity = 17/49 (34.69%), Postives = 23/49 (46.94%), Query Frame = 3
Query:  975 ISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            I   G +PANFL+   G    K++      I  DP     +L N FGG+
Sbjct:  276 IKLVGGSPANFLDVGGGANKEKVTA-AFKLILADP-AVKAVLVNIFGGI 322          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacter sulfurreducens GN=sucC PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.886e-57
Identity = 120/276 (43.48%), Postives = 171/276 (61.96%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  +L +YGI VP+G VA +  + E+ AK++GG   VIKAQ+ AGGRGK        GGV++V+ P +A     ++ G +LIT QTG  G     + + +     REFYL+I +DR++    ++AS++GG+DIE V ++ P+ I    ID + G+    AR IA  LG S    ED  + +  LYKV +EKD + +EINPL  T    ++AMDAK+NFDDNA FR +E  D  D +Q D  E+   K  L++IKL  +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKEILSAYGIPVPRGRVALTSDQVERAAKEMGGR-CVIKAQIYAGGRGKA-------GGVKLVHHPEQAQDYGKELFGRRLITPQTGPEGLKVRRILVEEAVEIAREFYLSITLDRSTSRYCLIASAEGGVDIEEVVQKSPDKIHVLTIDPYTGLRPFQARRIALALGLSGTLCEDCVELMLNLYKVVLEKDCSLVEINPLVVTRAGWLMAMDAKINFDDNAIFRHREYPDMMDYSQLDTLEINAGKYDLSYIKLSGNIGCMVNGAGLAMA 270          

HSP 2 Score: 23.0978 bits (48), Expect = 3.886e-57
Identity = 15/50 (30.00%), Postives = 22/50 (44.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            ++   G  PANFL+   G    K++      I  D    G +  N FGG+
Sbjct:  274 VLKEFGGEPANFLDVGGGATREKVA-EAFKIILEDADVKG-VFVNIFGGI 321          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BACSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis GN=sucC PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 3.886e-57
Identity = 113/276 (40.94%), Postives = 174/276 (63.04%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +L  YG+ VP+G VA +  EA + AK +     V+KAQ+ AGGRGK        GGV++  S  E    A++++G  L+T QTG  G++   + I +    ++E+Y+ +++DRA+   V++AS +GG +IE VA++ PE I    ID   G+    AR IA  +   ++ +  A   +  LYK F+EKD +  EINPL  T D  V+A+DAKLNFD NA +RQK++ ++RD+ +EDP+E++ +K  L++I LD +IGC+VNGAGL ++
Sbjct:    3 IHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMS 271          

HSP 2 Score: 27.7202 bits (60), Expect = 3.886e-57
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI + +GG  +     +GGGAT E + + F+
Sbjct:  267 GLAMSTMDIIKHYGGEPANF-LDVGGGATAEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_PELUB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelagibacter ubique GN=sucC PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.886e-57
Identity = 115/276 (41.67%), Postives = 172/276 (62.32%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHE+++  +L+ YG  VP+G  A +  E  + AK +  E  V+KAQ+ AGGRGK        GGV+++ +  E S+ A +++G  L+T QTG AGR    +++ +     +EFYL+ L+DRAS   V ++S QGGMDIE VA++ PE IITT IDI   ++D     I      ++   + A   I+ +YK+F+  DA  +E+NPL  T + +++ +DAK+NFD NA FR  E+ + RD+ +EDP E+  +K  L +IKLD  IGC+VNGAGL +A
Sbjct:    3 IHEHQAKQILKKYGAVVPEGVFAFTVDELIEKAKSLKTEKFVLKAQIHAGGRGKA-------GGVKILNTIDELSVAAKELLGKTLVTHQTGPAGREVKRLYVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTKIDITDEISDADCEKIIAIYALADDAKKQAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEIIELRDLNEEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMA 271          

HSP 2 Score: 28.1054 bits (61), Expect = 3.886e-57
Identity = 21/56 (37.50%), Postives = 28/56 (50.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV--CSLL 1133
            +I   G  PANFL+   G    K+S   L  I +D    G +L N FGG+  C +L
Sbjct:  275 IIKLYGEEPANFLDVGGGASKEKVSA-ALKIILSDKNVKG-ILINIFGGIMRCDVL 328          
The following BLAST results are available for this feature:
BLAST of DY263081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCC_POLSQ1.345e-5743.88Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_ALKMQ1.753e-5740.94Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_CHLL22.286e-5741.43Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_RHOFD2.286e-5742.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_DECAR2.286e-5742.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BRAJA2.977e-5743.37Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_MYXXD2.981e-5741.37Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_GEOSL3.886e-5743.48Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACSU3.886e-5740.94Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_PELUB3.886e-5741.67Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10DA11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263081 ID=DY263081; Name=DY263081; organism=Citrus clementina; type=EST; length=1278bp
CGATATACCCCGACGTGTGTCTGCCGCTCAGACATCATGTACAACTTTGC
CCGCGCCCGGCCGCTGGCTCGCGCTGTTCGCGCTGCTGCTGAGACACCAC
TGATGCGCTCCCAGCAAAGGAGAGGGCTCGCCATCCACGAATACAGGTCC
GCTGCCCTGCTCGAGTCGTATGGCATCGGCGTGCCCAAGGGTGGTGTCGC
TACCAGCGGCGCCGAGGCAGAGAAGATTGCCAAGGACATTGGCGGAGAGG
ACGCCGTGATCAAGGCCCAGGTTCTTGCTGGAGGTCGTGGAAAGGGCACC
TTTGACAATGGCTTCAAGGGCGGTGTCAGAGTCGTCTACTCTCCCCGCGA
AGCCTCCATCCTCGCCGACCAGATGATCGGCCACAAGCTCATCACCAAGC
AAACGGGAGCCGCCGGCCGGCTCTGCAACTCCGTCTTCATTGTCGACCGC
AAGTTTGCCCGCCGCGAGTTCTACCTCGCTATCCTCATGGACCGCGCGTC
ACAAGGCCCCGTCATTGTCGCTTCGTCGCAAGGAGGCATGGACATTGAGA
CAGTCGCAAAGGAGCACCCAGAGGCTATCATCACCACCCCGATCGACATC
CACAAGGGCGTCACCGACGACATTGCCCGCAACATCGCAACCGAACTCGG
CTTCTCCGAGCAGTGCATCGAGGACGCCAAGGACACCATCCAGAAGCTGT
ACAAGGTCTTCATGGAGAAGGACGCCACCCAGATTGAAATCAACCCCCTC
TCTGAGACCACCGACCACCAGGTCCTCGCCATGGACGCCAAGCTCAACTT
TGACGACAACGCCGATTTCCGCCAGAAGGAGGTTTTCGACTGGCGCGACA
TCACCCAGGAAGACCCCGAGGAAGTCAAGGGCGCTAAAGTCGGTCTCAAC
TTCATCAAGCTCGACCGTGACATTGGCTGCCTCGTCAACGGAGCCGGGCT
CCCCCTTGCCCACAATGGACATTAATCAGCTCCACGGGGGCCGCGCCAGC
CAACTTCCTCGAACGTTGGGCGGGGGTGCTACACCCGAAGCTATCAGGCA
GGGGTTTGAACCGGATTACCACCGACCCCCAGGGTTACGGCCATCTTTTG
TCAAACTTCTTTGGGGGGGTATGCTCCCTTTTGCCATGCTTTTGGCTAAG
GGGTTTCGAATTCCGGGTTTGTCAAAGAGAAAAAAAAACCCCTCCAAAAA
TCTCCGGGGTTATTACTCTCGGGGGTTTTAAAGGGGGGAACAATAAAAAA
AGGGGGAGAGGGGGGCTTCCTCCCCCCA
back to top