DY263081

Overview
NameDY263081
Unique NameDY263081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRUME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis GN=sucC PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.051e-63
Identity = 127/279 (45.52%), Postives = 176/279 (63.08%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR+   P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L       ED       LYK F EKD + +EINPL   T+ +V  +DAK++FD+NA FR  ++ + RD+T+EDP+E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.5722 bits (70), Expect = 1.051e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVEG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRUMB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucC PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.051e-63
Identity = 127/279 (45.52%), Postives = 176/279 (63.08%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR+   P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L       ED       LYK F EKD + +EINPL   T+ +V  +DAK++FD+NA FR  ++ + RD+T+EDP+E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.5722 bits (70), Expect = 1.051e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVEG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRUC2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucC PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.051e-63
Identity = 127/279 (45.52%), Postives = 176/279 (63.08%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR+   P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L       ED       LYK F EKD + +EINPL   T+ +V  +DAK++FD+NA FR  ++ + RD+T+EDP+E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.5722 bits (70), Expect = 1.051e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVEG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRUAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus GN=sucC PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.051e-63
Identity = 127/279 (45.52%), Postives = 176/279 (63.08%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR+   P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L       ED       LYK F EKD + +EINPL   T+ +V  +DAK++FD+NA FR  ++ + RD+T+EDP+E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.5722 bits (70), Expect = 1.051e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVEG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BRUA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus (strain S19) GN=sucC PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.051e-63
Identity = 127/279 (45.52%), Postives = 176/279 (63.08%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR+   P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L       ED       LYK F EKD + +EINPL   T+ +V  +DAK++FD+NA FR  ++ + RD+T+EDP+E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEEDPKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.5722 bits (70), Expect = 1.051e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVEG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.371e-63
Identity = 126/279 (45.16%), Postives = 174/279 (62.37%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTF---DNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++ ALL  YG  V  G V     EA+  A ++ G   V+KAQ+ AGGRGKG F   + G KGGVR+  S  EA  LA QM+G  L+T QTG  G+  N ++I D     RE YLA+L+DR +     VAS++GGMDIE VA   PE I++  +D   G++D   R +A  LG S   ++     ++ LY++F+EKD   +EINPL    D  + A+DAK+ FD+NA +RQ ++   RD T+EDP+E+  +K  LN+I LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGELDGPLWVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLSGAQVKQCVALVKNLYRMFIEKDMEMLEINPLIVMKDGNLKALDAKMGFDNNALYRQPDILALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMA 281          

HSP 2 Score: 32.7278 bits (73), Expect = 1.371e-63
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT+DP   G +L N FGG+
Sbjct:  285 IIKLFGAEPANFLDVGGGATKEKVT-EAFKIITSDPNVKG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_NITSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitratiruptor sp. (strain SB155-2) GN=sucC PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.331e-63
Identity = 119/276 (43.12%), Postives = 184/276 (66.67%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  +   YG+ VP+G VA +G EA ++A+ +GG+  V+KAQ+ AGGRGK        GGV++  S  E   +A++M+G  L+T QTG  G+    V++ +    ++E+YL +++DR+S+ PV++AS++GGM+IE VA + PE II   ID   G      R +A  LG +++ I       + LYKV+M+KDA  IEINPL +T D + LA+DAK+ FDDNA ++  ++ + RD+++EDP EV+ AK GL+++ LD ++GC+VNGAGL +A
Sbjct:    3 IHEYQAKEIFREYGVPVPRGEVAFTGPEAREVAQRLGGDLWVVKAQIHAGGRGKA-------GGVKLARSLDEVEKIAEEMLGMTLVTHQTGPEGKKVEKVYVEEGADIQKEYYLGMVLDRSSEMPVMMASTEGGMEIEEVAAKTPEKIIKVAIDPTIGFQGFHGRKLAFGLGLAKEEIRPFIQFAEALYKVYMDKDANLIEINPLIKTGDGRFLALDAKMGFDDNALYKHPDIHEMRDLSEEDPVEVEAAKYGLSYVNLDGNVGCMVNGAGLAMA 271          

HSP 2 Score: 30.8018 bits (68), Expect = 2.331e-63
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI +  GG  +     +GGGA P+ + +GFE
Sbjct:  267 GLAMATMDIIKHEGGEPANF-LDVGGGANPDTVAKGFE 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_OPITP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 3.631e-63
Identity = 127/276 (46.01%), Postives = 181/276 (65.58%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++ AL E +G+ VPKG  A +  E       +     V+K+Q+ AGGRGKGTF +GFKGGV+V  S  EA   A +M+G+ L+T QTG AGR   +++       ++E+YLAIL+DRA+  PVIVAS++GGM+IE VA + P+ I    +D   G+ D   R +  +LGF+    ++A   I+ LY+ F E DA+ +E+NPL  T D QV A+DAK+ FDDNA FR  E+ + RD+ +EDP+E++ +K  LN+I LD +I CLVNGAGL ++
Sbjct:    3 IHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQLPEGMIVVKSQIHAGGRGKGTFTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFTAAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQVEALDAKVAFDDNALFRHPELVELRDLNEEDPKEIEASKHELNYIALDGNIACLVNGAGLAMS 278          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_OCHA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucC PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 6.736e-63
Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDN---GFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++  LL +YG  +  G    S  +AE+ AK + G   V+K+Q+ AGGRGKG F       KGGVR+  S  E    A +M+G+ L+TKQTG AG+  N ++I D     RE YL+IL+DR    P  V S++GGMDIE VA+E PE I+T  ID  KGVTD+ A  +A  L    Q  ED       LYK F EKD + +EINPL   TD +V  +DAK++FD NA FR  ++ + RD+++ED +E++ +K  L ++ LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALKLEGQAREDGVKLFPILYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQELRDLSEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMA 281          

HSP 2 Score: 31.9574 bits (71), Expect = 6.736e-63
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT DP   G +L N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGASKEKVTA-AFKIITADPAVQG-ILVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BURM1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=sucC PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.146e-62
Identity = 122/278 (43.88%), Postives = 181/278 (65.11%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   +L  +G+ VP+G  A S  EA K+A+++GG   V+KAQ+ AGGRGKG       GGV+V  S  +    A+Q++G +L+T QTG  G+  N + I +    ++E Y+++++DR SQ  V++ SS+GGMDIE VA++HPE I    ++   G+ D  A ++AT++G     I  A+  +Q LYK F E DA+  EINPL+ + D +V+A+DAK NFD NA FR  E+  +RD+ +EDP E++ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    1 MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHAGGRGKG-------GGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFRHPEIVAYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 30.4166 bits (67), Expect = 1.146e-62
Identity = 20/59 (33.90%), Postives = 30/59 (50.85%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFEPDYHRPPGLRPSFVKLLWGGM 1123
            G  + TMD  +L GG  +     +GGGAT E + + F+    + PGL+   V +  G M
Sbjct:  267 GLAMATMDTIKLFGGEPANF-LDVGGGATTEKVTEAFKL-MLKNPGLKAILVNIFGGIM 323          
The following BLAST results are available for this feature:
BLAST of DY263081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCC_BRUME1.051e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BRUMB1.051e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BRUC21.051e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BRUAB1.051e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BRUA11.051e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_PARDP1.371e-6345.16Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_NITSB2.331e-6343.12Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_OPITP3.631e-6346.01Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_OCHA46.736e-6345.52Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BURM11.146e-6243.88Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10DA11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263081 ID=DY263081; Name=DY263081; organism=Citrus clementina; type=EST; length=1278bp
CGATATACCCCGACGTGTGTCTGCCGCTCAGACATCATGTACAACTTTGC
CCGCGCCCGGCCGCTGGCTCGCGCTGTTCGCGCTGCTGCTGAGACACCAC
TGATGCGCTCCCAGCAAAGGAGAGGGCTCGCCATCCACGAATACAGGTCC
GCTGCCCTGCTCGAGTCGTATGGCATCGGCGTGCCCAAGGGTGGTGTCGC
TACCAGCGGCGCCGAGGCAGAGAAGATTGCCAAGGACATTGGCGGAGAGG
ACGCCGTGATCAAGGCCCAGGTTCTTGCTGGAGGTCGTGGAAAGGGCACC
TTTGACAATGGCTTCAAGGGCGGTGTCAGAGTCGTCTACTCTCCCCGCGA
AGCCTCCATCCTCGCCGACCAGATGATCGGCCACAAGCTCATCACCAAGC
AAACGGGAGCCGCCGGCCGGCTCTGCAACTCCGTCTTCATTGTCGACCGC
AAGTTTGCCCGCCGCGAGTTCTACCTCGCTATCCTCATGGACCGCGCGTC
ACAAGGCCCCGTCATTGTCGCTTCGTCGCAAGGAGGCATGGACATTGAGA
CAGTCGCAAAGGAGCACCCAGAGGCTATCATCACCACCCCGATCGACATC
CACAAGGGCGTCACCGACGACATTGCCCGCAACATCGCAACCGAACTCGG
CTTCTCCGAGCAGTGCATCGAGGACGCCAAGGACACCATCCAGAAGCTGT
ACAAGGTCTTCATGGAGAAGGACGCCACCCAGATTGAAATCAACCCCCTC
TCTGAGACCACCGACCACCAGGTCCTCGCCATGGACGCCAAGCTCAACTT
TGACGACAACGCCGATTTCCGCCAGAAGGAGGTTTTCGACTGGCGCGACA
TCACCCAGGAAGACCCCGAGGAAGTCAAGGGCGCTAAAGTCGGTCTCAAC
TTCATCAAGCTCGACCGTGACATTGGCTGCCTCGTCAACGGAGCCGGGCT
CCCCCTTGCCCACAATGGACATTAATCAGCTCCACGGGGGCCGCGCCAGC
CAACTTCCTCGAACGTTGGGCGGGGGTGCTACACCCGAAGCTATCAGGCA
GGGGTTTGAACCGGATTACCACCGACCCCCAGGGTTACGGCCATCTTTTG
TCAAACTTCTTTGGGGGGGTATGCTCCCTTTTGCCATGCTTTTGGCTAAG
GGGTTTCGAATTCCGGGTTTGTCAAAGAGAAAAAAAAACCCCTCCAAAAA
TCTCCGGGGTTATTACTCTCGGGGGTTTTAAAGGGGGGAACAATAAAAAA
AGGGGGAGAGGGGGGCTTCCTCCCCCCA
back to top