DY263081

Overview
NameDY263081
Unique NameDY263081
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_RALEJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ralstonia eutropha (strain JMP134) GN=sucC PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.576e-59
Identity = 121/276 (43.84%), Postives = 174/276 (63.04%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +L  Y + VP+G  A S AEA K A+++GG   V+KAQ+ AGGRGKG       GGV+V  S  +    A  ++G +L+T QTG  G+  N + I +    ++E Y+++++DR SQ   ++ASS+GGMDIE VA   PE I T  I+   G+TD  A +IA ++G  +  +  A+  +Q LYK F + DA+  EINPL  T + +V+A+DAK NFD NA FR  E+  +RD+ +ED  E++ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    3 IHEYQGKEILRKYNVPVPRGIPAFSVAEALKAAEELGGPVWVVKAQIHAGGRGKG-------GGVKVAKSIDDVKTYATNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYVSLVVDRVSQKIALMASSEGGMDIEEVAAHTPEKIHTLIIEPSTGLTDADADDIARKIGVPDASVAQARQALQGLYKAFYDTDASLAEINPLILTGEGKVIALDAKFNFDSNALFRHPEIVAYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 27.335 bits (59), Expect = 5.576e-59
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD  +L GG  +     +GGGAT E + + F+
Sbjct:  267 GLAMATMDTIKLFGGEPANF-LDVGGGATTEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_RALEH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sucC PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.576e-59
Identity = 122/276 (44.20%), Postives = 172/276 (62.32%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +L  Y + VP+G  A S  EA K A+ +GG   V+KAQ+ AGGRGKG       GGV+V  S  +    A  ++G +L+T QTG  G+  N + I +    ++E Y+++++DR SQ   ++ASS+GGMDIE VA   PE I T  I+   G+TD  A +IA ++G  +  +  A+  +Q LYK F E DA+  EINPL  T D +V+A+DAK NFD NA FR  E+  +RD+ +ED  E++ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    3 IHEYQGKEILRKYNVPVPRGIPAFSVDEALKAAETLGGPVWVVKAQIHAGGRGKG-------GGVKVAKSIDDVKTYASNILGMQLVTHQTGPEGKKVNRLLIEEGADIKKELYVSLVVDRVSQKVALMASSEGGMDIEEVAAHSPEKIHTLIIEPSVGLTDAEADDIARKIGVPDTSVAQARQALQGLYKAFYETDASLAEINPLILTGDGKVIALDAKFNFDSNALFRHPEIVAYRDLDEEDANEIEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 27.335 bits (59), Expect = 5.576e-59
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD  +L GG  +     +GGGAT E + + F+
Sbjct:  267 GLAMATMDTIKLFGGEPANF-LDVGGGATTEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_JANSC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Jannaschia sp. (strain CCS1) GN=sucC PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.235e-58
Identity = 120/279 (43.01%), Postives = 166/279 (59.50%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTF---DNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY++ ALL  YG  V  G V T   +A+  A ++ G   V+KAQ+ AGGRGKG F   D G  GGVR+  S +EA+  A +M+G  L+T QTG  G+  N ++I D      E YLA+L+DR S     V S++GGMDIE VA   PE I++  +D   G      R +A  LG   Q ++     + +L+  F EKD   +EINPL  T +  +  +DAK++FD NA +R  +V   RD T+EDP+E+  +K  LN+I LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQAKALLAQYGAPVSDGRVVTKAEDAKTAAGEMDGPLWVVKAQIHAGGRGKGKFKEADAGEAGGVRLAKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYLALLVDRQSSRISFVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPYHGRRVAFSLGLEGQQVKQCVKLMGQLFTAFQEKDMEMLEINPLIVTDEGNLKVLDAKVSFDGNAVYRHADVASLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMA 281          

HSP 2 Score: 33.113 bits (74), Expect = 1.235e-58
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 3
Query:  972 LISSTGAAPANFLERWAGVLHPKLSGRGLNRITTDPQGYGHLLSNFFGGV 1121
            +I   GA PANFL+   G    K++      IT+DPQ  G +  N FGG+
Sbjct:  285 IIKLYGAEPANFLDVGGGATKEKVT-EAFKIITSDPQVKG-IFVNIFGGI 332          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_CHLT3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=sucC PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.236e-58
Identity = 120/279 (43.01%), Postives = 173/279 (62.01%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDI----GGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPL 957
            IHEY+   +L  +G+ VPKG VA S  EA+K A+ +    GG   V+KAQ+ AGGRGK        GGV++V S  EA  +A QMIG  L+T QTG  G+    + + +     +E YL I +DRA+   V++ S++GGM+IE VA+E PE ++   I    G+  + AR  A  LG   +  ++A   I  LY  +M+ D +  EINPL  T + +V+A+DAK+NFDDNA FR K+  D RD ++EDP EV+ +K  LN+++LD ++GC+VNGAGL +
Sbjct:    3 IHEYQGKEILRGFGVTVPKGIVAFSAEEAKKAAETLLTEQGGGVVVVKAQIHAGGRGKA-------GGVKLVRSADEAFEVATQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIEKELYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQIHPTLGLQPNQAREAAFFLGLEGEQFKNAVKFISALYNAYMKADCSLAEINPLVVTKEGRVIALDAKINFDDNALFRHKDYIDLRDTSEEDPLEVEASKSNLNYVRLDGNVGCMVNGAGLAM 274          

HSP 2 Score: 32.7278 bits (73), Expect = 1.236e-58
Identity = 15/37 (40.54%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGF 1057
            G  + TMD+ QL GG+ +     +GGGA P+ +++GF
Sbjct:  271 GLAMGTMDMIQLAGGKPANF-LDVGGGANPQTVQEGF 306          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_PROVI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=sucC PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.236e-58
Identity = 119/279 (42.65%), Postives = 171/279 (61.29%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDA----VIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPL 957
            IHEY+   +L  +G+ VPKG VA S  EA++ A+ +  E +    V+KAQ+ AGGRGK        GGV++  SP EA  +A QMIG  L+T QTG  G+    + + +     REFY+ I +DRA+   V++ S++GGM+IE VA+E P+ ++   +D   G+    AR  A  LG   +    A   I  LYK +   DA   EINPL  T + +VLA+DAK+NFD NA +R K+  + RDIT+EDP EV+ +K  LN+++LD ++GC+VNGAGL +
Sbjct:    3 IHEYQGKDILRKFGVAVPKGIVAHSPEEAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAYEIASQMIGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSQNVLMISTEGGMEIEKVAEETPDRLLKIQVDPLFGLQGFQAREAAFFLGLEGEQFRSAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRHKDFLELRDITEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAM 274          

HSP 2 Score: 34.2686 bits (77), Expect = 1.236e-58
Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI QL GG+ +     +GGGA+P+ + +GF+
Sbjct:  271 GLAMGTMDIIQLAGGKPANF-LDVGGGASPQTVEEGFK 307          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_BACCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=sucC PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.611e-58
Identity = 117/276 (42.39%), Postives = 176/276 (63.77%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+  A+L SYG+ VP G VA +  EA + AK++G +  V+KAQ+ AGGRGK        GGV+V  +  E    A+ ++G  L+T QTG  G+    + I +    ++E+Y+ +++DRA+   V++AS +GG +IE VA++ PE I    ID   G+    AR IA  +   ++ +  A   +  LY+VF+EKD +  EINPL  T D +V+A+DAKLNFD NA +R K++ + RD+ +EDP+E++ +K  LN+I LD +IGC+VNGAGL +A
Sbjct:    3 IHEYQGKAILRSYGVSVPNGKVAFTVEEAVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAENILGSTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFHINIPKELVGQAVKFMMGLYRVFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMA 271          

HSP 2 Score: 26.1794 bits (56), Expect = 1.611e-58
Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  947 GSPLPTMDI-NQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMDI    HG  A+ L   +GGGAT E + + F+
Sbjct:  267 GLAMATMDIIKHYHGDPANFLD--VGGGATAEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_POLNA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polaromonas naphthalenivorans (strain CJ2) GN=sucC PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.611e-58
Identity = 118/278 (42.45%), Postives = 177/278 (63.67%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY+   +L ++G+ VP+G  A +  EA + A+ +GG   V+KAQ+ AGGRGKG       GGV+V  +  +   +A +++G +L T QTG  G+    ++I D    ++E+Y++++ DRA+Q    +ASS+GGMDIE VA   PE IIT  ID   G+ ++ A  IA  +G   +    A D  QKLYK +M+ DA+ +EINPL+  + + ++A+DAK NFD NA FR  ++  +RD+ +EDP EV+ +K  L +I LD +IGCLVNGAGL +A
Sbjct:    1 MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKG-------GGVKVAKTIEDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSLVTDRATQKVAFIASSEGGMDIEEVAHSTPEKIITEFIDPLTGLGEEQAVKIANGIGLPPESTAQAVDIFQKLYKCYMDTDASLVEINPLNRDSKNALMALDAKFNFDPNALFRHADIVAYRDLDEEDPAEVEASKFDLAYISLDGNIGCLVNGAGLAMA 271          

HSP 2 Score: 27.335 bits (59), Expect = 1.611e-58
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 2
Query:  947 GSPLPTMDINQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD  +L GG  +     +GGGAT E + + F+
Sbjct:  267 GLAMATMDTIKLFGGEPANF-LDVGGGATAEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_DESAH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=sucC PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.693e-58
Identity = 119/278 (42.81%), Postives = 178/278 (64.03%), Query Frame = 1
Query:  127 LAIHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            + IHEY++ AL  ++G+ VP GGVA S  EA  +A+ +GG   V+KAQ+ AGGRGKG       GGV++  S  EA   A +++G  L+T QTG  GR    + +   +   +E YL+IL+DRA+ G VI+AS +GGMDIETVA + PE II   +D   G+     R +   LG  +  +++    ++ LY +F++ D + +EINPL  T+D +V+A+DAK++ D NA FR K++ + RD+ +EDP EV+ +K  LN+I LD ++G +VNGAGL +A
Sbjct:    1 MKIHEYQAKALFRTFGVPVPDGGVAFSVEEAVDVARGLGGYPVVVKAQIHAGGRGKG-------GGVKLAASEEEARRFAGEILGMTLVTHQTGPQGREVKKLLVEAGQKIAKELYLSILVDRATAGIVIMASQEGGMDIETVAAKTPEKIIKVRVDPLTGIQGYYLRQVGFGLGLPKAALKEFSALLKNLYTLFVKNDCSLLEINPLILTSDDRVMALDAKVDIDSNALFRHKDLVELRDLDEEDPLEVEASKFNLNYINLDGNVGNIVNGAGLAMA 271          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_STAES (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucC PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.571e-58
Identity = 116/276 (42.03%), Postives = 175/276 (63.41%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +  S G+ VP+G VA +  EA + AK++  +  V+KAQ+ AGGRGK        GGV++  S  E    A++++G +L+T QTG  G+    ++I +    ++E+Y+  ++DRA+    ++AS +GG +IE VA + PE I    ID   G++   AR IA  +   ++ +  A   +  LY VF+EKD + +EINPL  T D QVLA+DAKLNFDDNA FR K++ + RD+ +EDP+E++ +K  L++I LD DIGC+VNGAGL +A
Sbjct:    3 IHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMA 271          

HSP 2 Score: 25.409 bits (54), Expect = 3.571e-58
Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  947 GSPLPTMD-INQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD IN   G  A+ L   +GGGAT E + + F+
Sbjct:  267 GLAMATMDTINHFGGNPANFLD--VGGGATKEKVTEAFK 303          
BLAST of DY263081 vs. ExPASy Swiss-Prot
Match: SUCC_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucC PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.571e-58
Identity = 116/276 (42.03%), Postives = 175/276 (63.41%), Query Frame = 1
Query:  133 IHEYRSAALLESYGIGVPKGGVATSGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGHKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEAIITTPIDIHKGVTDDIARNIATELGFSEQCIEDAKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVFDWRDITQEDPEEVKGAKVGLNFIKLDRDIGCLVNGAGLPLA 960
            IHEY+   +  S G+ VP+G VA +  EA + AK++  +  V+KAQ+ AGGRGK        GGV++  S  E    A++++G +L+T QTG  G+    ++I +    ++E+Y+  ++DRA+    ++AS +GG +IE VA + PE I    ID   G++   AR IA  +   ++ +  A   +  LY VF+EKD + +EINPL  T D QVLA+DAKLNFDDNA FR K++ + RD+ +EDP+E++ +K  L++I LD DIGC+VNGAGL +A
Sbjct:    3 IHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMA 271          

HSP 2 Score: 25.409 bits (54), Expect = 3.571e-58
Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  947 GSPLPTMD-INQLHGGRASQLPRTLGGGATPEAIRQGFE 1060
            G  + TMD IN   G  A+ L   +GGGAT E + + F+
Sbjct:  267 GLAMATMDTINHFGGNPANFLD--VGGGATKEKVTEAFK 303          
The following BLAST results are available for this feature:
BLAST of DY263081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCC_RALEJ5.576e-5943.84Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_RALEH5.576e-5944.20Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_JANSC1.235e-5843.01Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_CHLT31.236e-5843.01Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_PROVI1.236e-5842.65Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACCN1.611e-5842.39Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_POLNA1.611e-5842.45Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_DESAH2.693e-5842.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAES3.571e-5842.03Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAEQ3.571e-5842.03Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DA11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263081 ID=DY263081; Name=DY263081; organism=Citrus clementina; type=EST; length=1278bp
CGATATACCCCGACGTGTGTCTGCCGCTCAGACATCATGTACAACTTTGC
CCGCGCCCGGCCGCTGGCTCGCGCTGTTCGCGCTGCTGCTGAGACACCAC
TGATGCGCTCCCAGCAAAGGAGAGGGCTCGCCATCCACGAATACAGGTCC
GCTGCCCTGCTCGAGTCGTATGGCATCGGCGTGCCCAAGGGTGGTGTCGC
TACCAGCGGCGCCGAGGCAGAGAAGATTGCCAAGGACATTGGCGGAGAGG
ACGCCGTGATCAAGGCCCAGGTTCTTGCTGGAGGTCGTGGAAAGGGCACC
TTTGACAATGGCTTCAAGGGCGGTGTCAGAGTCGTCTACTCTCCCCGCGA
AGCCTCCATCCTCGCCGACCAGATGATCGGCCACAAGCTCATCACCAAGC
AAACGGGAGCCGCCGGCCGGCTCTGCAACTCCGTCTTCATTGTCGACCGC
AAGTTTGCCCGCCGCGAGTTCTACCTCGCTATCCTCATGGACCGCGCGTC
ACAAGGCCCCGTCATTGTCGCTTCGTCGCAAGGAGGCATGGACATTGAGA
CAGTCGCAAAGGAGCACCCAGAGGCTATCATCACCACCCCGATCGACATC
CACAAGGGCGTCACCGACGACATTGCCCGCAACATCGCAACCGAACTCGG
CTTCTCCGAGCAGTGCATCGAGGACGCCAAGGACACCATCCAGAAGCTGT
ACAAGGTCTTCATGGAGAAGGACGCCACCCAGATTGAAATCAACCCCCTC
TCTGAGACCACCGACCACCAGGTCCTCGCCATGGACGCCAAGCTCAACTT
TGACGACAACGCCGATTTCCGCCAGAAGGAGGTTTTCGACTGGCGCGACA
TCACCCAGGAAGACCCCGAGGAAGTCAAGGGCGCTAAAGTCGGTCTCAAC
TTCATCAAGCTCGACCGTGACATTGGCTGCCTCGTCAACGGAGCCGGGCT
CCCCCTTGCCCACAATGGACATTAATCAGCTCCACGGGGGCCGCGCCAGC
CAACTTCCTCGAACGTTGGGCGGGGGTGCTACACCCGAAGCTATCAGGCA
GGGGTTTGAACCGGATTACCACCGACCCCCAGGGTTACGGCCATCTTTTG
TCAAACTTCTTTGGGGGGGTATGCTCCCTTTTGCCATGCTTTTGGCTAAG
GGGTTTCGAATTCCGGGTTTGTCAAAGAGAAAAAAAAACCCCTCCAAAAA
TCTCCGGGGTTATTACTCTCGGGGGTTTTAAAGGGGGGAACAATAAAAAA
AGGGGGAGAGGGGGGCTTCCTCCCCCCA
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