DY263099

Overview
NameDY263099
Unique NameDY263099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HSE1_USTMA (Class E vacuolar protein-sorting machinery protein HSE1 OS=Ustilago maydis GN=HSE1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.604e-12
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 3
Query:  249 KATSELLISPDWTMNIDICDSINSH-QWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKI-VKKKPDMQLRDKILVLLDSWQEAF 566
            KATS+ L S +W +N+++CD ++S     A++ + A++KRL H+N+ VQL ALTL + + KNCG   H +IA R+    + +I + +     ++ +   L+  W   F
Sbjct:   14 KATSDELTSENWELNLEVCDKVSSGGDTAARNCIAAIQKRLVHRNANVQLYALTLADAVAKNCGLAAHQEIASRSFTQTLARICLDRNTHSTVKKRCSALVKEWAGEF 121          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TM1L1_MOUSE (TOM1-like protein 1 OS=Mus musculus GN=Tom1l1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.897e-12
Identity = 46/137 (33.58%), Postives = 79/137 (57.66%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRL-QHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGE-MVKIVKKKPDMQL--RDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFP 641
            ++KAT   +++ DW   + ICD IN+ Q   KD VKA+KKR+ ++ N K   L+L+L++  V+NCG      I ++  + + +VK++  +  + L  +++IL  + +W + F G G    +    Y DL + GVQFP
Sbjct:   19 IEKATFAGVLTEDWGQFLHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLSLSLIDMCVQNCGPSFQSLIVKKEFIKDTLVKLLNPRYTLPLETQNRILNFIKTWSQGFPG-GVDVSEVKEVYLDLLKKGVQFP 154          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HSE1_NEUCR (Class E vacuolar protein-sorting machinery protein hse-1 OS=Neurospora crassa GN=hse-1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.897e-12
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  240 AVDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVK-KKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPDAAP 665
            A++KAT E L S DW   +++CD + +    AK+ V ++ KRL H+N+ VQL  L +   + +NCG  +H +++ R     ++K+   +    Q++ KIL  +  W + F         Y  AY  L++     P   P +AP
Sbjct:   13 AINKATDENLTSEDWGAIMEVCDRVATDANGAKEAVNSMIKRLAHRNANVQLYTLEVANALSQNCGKNMHRELSSRAFTDALLKLANDRNTHTQVKAKILERMKEWSDMFKSDSDLGIMYD-AYYRLKQSN---PTLQPPSAP 151          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HSE1_CRYNE (Class E vacuolar protein-sorting machinery protein HSE1 OS=Cryptococcus neoformans GN=HSE1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.897e-12
Identity = 45/145 (31.03%), Postives = 77/145 (53.10%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSH-QWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVK-KKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYW-AYEDLRRYGVQF--PKRSPDAA 662
            V KAT E L S DW +N+D+CD ++S  Q  A+  V A++KRL H+N  VQ+ AL L  ++ +NCG  +  +++ RN    + +++  +     ++ K L  + SW +     G  +       Y+ LR     F  P+ +P++A
Sbjct:   13 VIKATDENLASEDWALNMDVCDKVSSDGQNGARQAVTALQKRLSHRNPNVQIYALELANSLAQNCGKDLLGELSSRNWTSALDRLINDRATSTPVKKKALSFVKSWAKQIEETGDPNLGLMGELYDQLRAKNHVFDEPEPTPESA 157          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HSE1_ASPFU (Class E vacuolar protein-sorting machinery protein hse1 OS=Aspergillus fumigatus GN=hse1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.897e-12
Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  240 AVDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKK 506
            AV KAT E L S +W   +D+CD + + +  AKD V A+ KRL H+N+ VQL  L L   + +NCG  +H ++A R+    ++++   +
Sbjct:   12 AVAKATDENLTSENWEYILDVCDKVAAEESGAKDAVAAMIKRLAHRNANVQLYTLELANALAQNCGPKIHRELASRSFTDALLRLANDR 100          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HRS_DROME (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Drosophila melanogaster GN=Hrs PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.688e-11
Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYED----LRRYGVQFPK-RSPDA 659
            ++ ATS L + PDW   + ICD IN      K+   A+KK++   N      +L +LE++VKNCG  VH ++  +         ++  P   +R K+L L+ +W  AF     +    Y A +D    L+  G  FP+ R  DA
Sbjct:   10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF-----RSSDKYQAIKDTMTILKAKGHTFPELREADA 148          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: VPS27_EMENI (Vacuolar protein sorting-associated protein 27 OS=Emericella nidulans GN=vps27 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.205e-11
Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKP---DMQLRDKILVLLDSWQEAFGGPGGKHPQYYW-AYEDLRRYGVQFPKRS 650
            +++AT+  L   D  +N++I D I S   Q KD ++++K+RL++KN  +Q+  L L +T VKN G     +IA R  +  +V ++K +    +  +RD +L L+  W  A    G     Y    Y  L+  G QFP +S
Sbjct:   15 IERATASSL--EDIALNLEISDLIRSKGVQPKDAMRSLKRRLENKNPNIQIATLKLTDTCVKNGGTHFLAEIASREFMDNLVSLLKAEGVPLNSSVRDLMLALIQDW--AMAAQGRMDLSYLGETYRKLQMEGFQFPPKS 150          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: VPS27_ASPTN (Vacuolar protein sorting-associated protein 27 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=vps27 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.205e-11
Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKP---DMQLRDKILVLLDSWQEAFGGPGGKHPQYY-WAYEDLRRYGVQFPKRS 650
            V++ATS  L   D  +N++I D I S   Q K+ ++++K+RL++KN  VQL  L L +T VKN G     +IA R  +  +V ++K +    + ++++K+L L+  W  A    G     Y    Y+ L+  G +FP ++
Sbjct:   15 VERATSSSL--EDIALNLEISDLIRSKSVQPKEAMRSLKRRLENKNPNVQLATLKLTDTCVKNGGTHFLAEIASREFMDNLVSLLKTEGLQLNTEVKEKMLELIQDW--AMAAQGRMDLSYVGQTYQRLQEEGFRFPPKT 150          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HSE1_MAGGR (Class E vacuolar protein-sorting machinery protein HSE1 OS=Magnaporthe grisea GN=HSE1 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.761e-11
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  240 AVDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIV-KKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPDAAP 665
            A+ KAT E L S DW   +++CD +      AK+ V+A+ +RL H+N+ VQL  L +   + +NCG  +H ++A R     ++K+  ++    Q++ KIL     W + F         Y  AY  L++     P+  P +AP
Sbjct:   13 AIAKATDENLTSEDWGAIMEVCDRVAGDDNGAKEAVQALIRRLAHRNANVQLYTLEVANALSQNCGKPMHRELASRAFTEALLKLANERNTHNQVKAKILEGTKEWSDMFKDDADLGIMYD-AYYRLKQTN---PQLQPPSAP 151          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: VPS27_MAGGR (Vacuolar protein sorting-associated protein 27 OS=Magnaporthe grisea GN=VPS27 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.912e-11
Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVK----KKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYW-AYEDLRRYGVQFPKR 647
            ++KATS  L   D  +N++I D I S     KD ++++KKR+ HKN   QL AL L +T VKN G     +IA R  +  +V ++K       +  +R +IL L+ SW  A    G     Y    Y+ L+  G QFP +
Sbjct:   17 IEKATSSSL--EDIALNLEISDVIRSKTVPPKDAMRSLKKRIGHKNPNTQLSALELTDTCVKNGGQHFLVEIASREFIDNLVSLLKATGPAAVNADVRARILGLIQSW--AAVTQGRVELSYIGEVYKTLQHEGFQFPPK 152          
The following BLAST results are available for this feature:
BLAST of DY263099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
HSE1_USTMA2.604e-1234.26Class E vacuolar protein-sorting machinery protein... [more]
TM1L1_MOUSE9.897e-1233.58TOM1-like protein 1 OS=Mus musculus GN=Tom1l1 PE=1... [more]
HSE1_NEUCR9.897e-1230.07Class E vacuolar protein-sorting machinery protein... [more]
HSE1_CRYNE9.897e-1231.03Class E vacuolar protein-sorting machinery protein... [more]
HSE1_ASPFU9.897e-1237.08Class E vacuolar protein-sorting machinery protein... [more]
HRS_DROME1.688e-1131.25Hepatocyte growth factor-regulated tyrosine kinase... [more]
VPS27_EMENI2.205e-1132.14Vacuolar protein sorting-associated protein 27 OS=... [more]
VPS27_ASPTN2.205e-1132.14Vacuolar protein sorting-associated protein 27 OS=... [more]
HSE1_MAGGR3.761e-1130.77Class E vacuolar protein-sorting machinery protein... [more]
VPS27_MAGGR4.912e-1135.00Vacuolar protein sorting-associated protein 27 OS=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DC05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263099 ID=DY263099; Name=DY263099; organism=Citrus clementina; type=EST; length=1175bp
ATAACGTNTGAAGGTAAAAAAAAAAAAAAGAATATATAAATTCTNTTGAG
CTTGAAAGCATTCATTGGGCGGTGTATTTTTCTTGGACCGAATTTTCTCG
TTAAACAAACAAACAAACAAACAAACAGGAAAAAGTTTTCATTTTCTTTT
TCTGTTATCTAATTTGGAGGGAGAGATAGAGAGTAAAGATGATGTCGTCA
TCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGACTGTGGCAGTTGACAA
GGCGACCAGCGAGCTTTTGATTAGTCCTGATTGGACTATGAACATCGATA
TCTGTGATTCCATCAATTCTCATCAGTGGCAGGCGAAAGATGTTGTGAAA
GCAGTGAAGAAAAGGTTACAGCACAAGAACTCAAAAGTGCAACTTCTTGC
GTTGACGCTTTTAGAGACGATGGTGAAGAATTGTGGTGATTTTGTTCATT
TTCAAATTGCTGAGAGGAATGTCTTGGGAGAGATGGTTAAAATTGTGAAG
AAGAAGCCAGATATGCAGCTGAGGGATAAAATCTTGGTTTTATTAGATTC
TTGGCAAGAGGCATTCGGTGGACCTGGGGGAAAACATCCTCAGTACTACT
GGGCTTATGAGGATTTAAGGCGTTATGGAGTACAATTTCCCAAGCGTTCA
CCAGATGCTGCTCCTATATTTACACCTCCTGTTTCCCACCCCACTCTAGG
ACAAGCTCAAGCTAGTTATGGAATGCCTAGCAATTCCTCAAGAAGGCTTG
ACGAAACAATGGCGACAGAGGTTGAAACTTTAAGTTTTTCAAGCTTGGAT
TCTATGCGAGATGTTATGGAGCTGTTAAGTGACATGCTGCAAGCTGTAAA
TCCTAGCGACCGTGAGGCAGTAAAGATGAGGTAATTGTTGATCTCGTCAG
TCGGTGTCGGTCCATCAAAAAAACTCATGCAGATGCTACTACACCCGGGG
ATGAGGAACTTTCTGCCGGGGTCTTGAATAAAGGACATTCTGGAAACTTT
GCTGCAAAAATGACGCTAAAACATCTGGTTTGCCATAACAACGGAATTAC
AAATTAATTCCAAACCAATGAAAAAATGCCCGCACCAACCCCAAAACAAC
GGAGCCTGGGAATCGAGCCCAAAACATAAGGGAACCCCCCCGCCCCGGTT
GTGTAGGTGGAAGAGGGCCCCATCT
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