DY263106

Overview
NameDY263106
Unique NameDY263106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1120
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263106 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.775e-47
Identity = 126/346 (36.42%), Postives = 178/346 (51.45%), Query Frame = 1
Query:    4 EYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSG---IIVLAEGRLMNLGCATGHPSFVMVCSFTNQVIAQLELWEEKSTGKYEKKVYVLPKHLDEKVAALHPGNLELS 1032
            EY+   +K LD  P    D+ +DDG D    +H+        E+T  LP                                 +++G  EETTTGV RL+ M++ G L  P I VND++TK  FDN YG   S  DG+ R T++++AGK  VV GYG  G+G A      GA VIVTE+DPI AL+A M+G +V+ + D     +IFVTTTGN+DI+  +H K M + A++ N GHF+ EID+  L +      +    +T R    E + G   I V+AEGRL+NL    GHP+ VM  SF NQ +    + E          V+ +P+ +D  VA L   ++ +S
Sbjct:  102 EYYEAIDKVLDIEP----DITIDDGADLIFKLHK--------ERTDLLP---------------------------------KILGGCEETTTGVHRLHAMEKEGALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVGGYGWCGRGVAMRAAGLGANVIVTEVDPIRALEARMDGYRVMRMADAARLGEIFVTTTGNRDILTAEHFKVMPDGAVLANSGHFNVEIDMEALTS------LAKSVKTVRHNIKEYDIGDRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRYIAENTLL----NGVHGVPRGIDTYVAKLKLESMGIS 392          
BLAST of DY263106 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 3.717e-45
Identity = 114/305 (37.38%), Postives = 169/305 (55.41%), Query Frame = 1
Query:  106 GVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT--IKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMVCSFTNQVIAQLELWEEKSTGKYEKKVYVLPKHLDEKVAAL 1008
            G   EE YE   ++ D       E +I++    D +    ++  ++ + ++G  EETTTG+ RL  M  +G L FP + VND+ TK  FDN YG   S  D +M  T+++IAGK  VVCGYG  G+G A   +  GA VIVTE+DPI AL+A M+G +V+ + D + +ADI +T TGN D++       MK+  ++ N GHF+ EI+   LE    + R T  +K   + ++ P+    I +LAEGRL+NL      GHP+ +M  SF  Q ++   L +EK     +  VY  P  +D  VA +
Sbjct:  100 GETNEEYYENIHRVLDH------EPEILIDDGADMIFLVHRERPELLDGIIGACEETTTGINRLRAMAADGALKFPVMAVNDAYTKYLFDNRYGTGQSTFDSIMGTTNMLIAGKTVVVCGYGWCGRGIAMRAEGLGASVIVTEVDPIRALEARMDGFRVMKVSDAVKEADILITATGNTDVVSESEFMNMKDGCVMANSGHFNVEINREALEE---LSRETGKVKEDIEVFIMPDGRK-IYLLAEGRLVNLASERGQGHPAEIMDMSFAMQALSARHLLQEKP----DPGVYRAPDEIDLMVARM 390          
BLAST of DY263106 vs. ExPASy Swiss-Prot
Match: SAHH_HALWD (Adenosylhomocysteinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=achY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 9.475e-41
Identity = 115/323 (35.60%), Postives = 166/323 (51.39%), Query Frame = 1
Query:   67 VDDGGDATLLIHEGVKAEEIYEKTGKLP--DPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDV-----LGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMVCSFTNQVIAQLELWEEKSTGKYEKKVYVLPKHLDEKVAAL 1008
            +D   + T     GV  E  Y+    +   +P  T +    +V  I  D        +  + + ++G +EETTTGV RL  M E+  L +P   VND+  K  FDN++G   S    +   T++  AGK  VV GYG  GKG A       A VIVTE++P  AL+A MEG +V+ + +  +  D+FVTTTGN+D+I  +  + M + AI+ N GHFD EI++     L ++TY     +      D          + VLAEGRL+NL    A GHP+ VM  SF  Q +   EL E KS+  Y+  V+ +P  LD +VA +
Sbjct:  100 LDSNENVTSYAKRGVDEEAYYDAIEAVVAHEPTITIDDGMDMVYAIHED--------HPDLLDTIIGGAEETTTGVHRLRAMDEDDELQYPVFAVNDTPMKRLFDNVHGTGESALATIAMTTNLSYAGKNVVVAGYGYCGKGVAQKAAGQNANVIVTEVEPRRALEAHMEGYEVMPMNEAATRGDVFVTTTGNRDVITQEDFEVMSDGAILANAGHFDVEINLEELSELAIDTYEARDGVQAYELGD-------GRRLNVLAEGRLVNLAAPIALGHPAEVMDQSFGIQAVCVRELIENKSS--YDAGVHNVPDELDREVAEI 405          
BLAST of DY263106 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.199e-35
Identity = 109/336 (32.44%), Postives = 163/336 (48.51%), Query Frame = 1
Query:   61 LIVDDGGDATLLIHE--------GVKAEEIYEKTGKL--PDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL--------ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG--CATGHPSFVMVCSFTNQVIAQLELWEEKSTGKYEKKVYVLPKHLDEKVAAL 1008
            L   DG  A L  HE        G + E  Y+    +   +P  T +    +V  +  D        + ++ + ++G +EETTTGV RL  M ++  L +P   VND+  K  FDN++G   S    +   T++  AGK  VV GYGD G+G A       A VIVTE++P  AL+A MEG  V+ + +     D+F+TTTGNK++I   H ++M +  ++ N GHFD E+++  L        E   GV+   +               + VLAEGRL+NL      GHP  VM  SF  Q +   EL   +   +Y   V+ +P  LD ++A +
Sbjct:   85 LSTHDGVSAALDAHESITSYAERGAEGEAYYDAIDAVLAHEPTVTVDDGGDLVFRVHED--------HPELIDTIIGGTEETTTGVHRLRAMDDDDALEYPVFAVNDTPMKRLFDNVHGTGESALANIAMTTNLSWAGKDVVVAGYGDCGRGVAKKAAGQNANVIVTEVEPRRALEAHMEGYDVMPMAEAAEVGDVFLTTTGNKNVITRAHFERMDDGVVLANAGHFDVEVNLDHLSELAVSEREAREGVREYEL----------ADGRRLNVLAEGRLVNLASPIGLGHPVGVMDQSFGVQAVCVRELVANRE--EYAAGVHNVPDELDIEIAEI 400          
BLAST of DY263106 vs. ExPASy Swiss-Prot
Match: SAHH_STRFR (Adenosylhomocysteinase (Fragment) OS=Streptomyces fradiae GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.683e-19
Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 1
Query:  748 PGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMVCSFTNQVIAQLELWEEKSTGKYEKKVYVLPKHLDEKVAALH 1011
            PG+ +  +KPQ   W F +    IIVL+EGRL+NLG ATGHPSFVM  SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKVA LH
Sbjct:    2 PGIVKDEVKPQVHTWTFADGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELYTKPE--QYPTDVYVLPKHLDEKVARLH 86          
The following BLAST results are available for this feature:
BLAST of DY263106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_METAC6.775e-4736.42Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_METTH3.717e-4537.38Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_HALWD9.475e-4135.60Adenosylhomocysteinase OS=Haloquadratum walsbyi (s... [more]
SAHH_HALSA1.199e-3532.44Adenosylhomocysteinase OS=Halobacterium salinarium... [more]
SAHH_STRFR2.683e-1956.82Adenosylhomocysteinase (Fragment) OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DC12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263106 ID=DY263106; Name=DY263106; organism=Citrus clementina; type=EST; length=1120bp
CAGGAGTACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGG
CGGCCCAGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCC
ACGAGGGAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCC
GACCCGGCCTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCAT
TAGAGATGGGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAA
GATTAGTTGGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTAT
CAGATGCAAGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGA
CTCTGTCACCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGC
TCCCAGATGGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTT
GCTGTTGTTTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTT
GAAGCAAGCCGGTGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCG
CTCTCCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGATGTC
CTCTCCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCAT
CATGGTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACA
TTGGTCACTTTGATAATGAAATTGATGTGCTCGGTCTTGAGACCTACCCG
GGTGTTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCC
CGAGACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACT
TGGGATGTGCCACTGGGCACCCCAGCTTTGTGATGGTCTGTTCCTTCACC
AATCAGGTGATTGCCCAGCTTGAGCTCTGGGAAGAGAAGAGCACCGGCAA
GTACGAGAAGAAGGTGTATGTTCTGCCCAAGCACCTCGATGAGAAGGTTG
CTGCTCTTCACCCTGGCAACTTGGAGCTAAGCTCACCGGGCTCACCAGGG
ACCAGGCTGAAAACTTCCGTGGGGTCCGCCGAAGGGTCTTTAAAGCCTCC
TTCCCAACGGGACCAAAGTG
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