DY263115

Overview
NameDY263115
Unique NameDY263115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1228
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_THEYD (Peptidyl-tRNA hydrolase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 56/189 (29.63%), Postives = 98/189 (51.85%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLA---AYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTI 879
            + VGLGNPG KY  TRHNVGF ++D  A   G+     +      +  + +  + + KP TYMNLSG +   +        LP   ++V HDD+ +P G                +S++++  G ++F R++IGIG+ P Q D   ++L  F +  R +I   + E VE + +++++G+ ++   +N +
Sbjct:    3 VIVGLGNPGRKYAKTRHNVGFMVVDELARKYGLVFKEKN-DYYITEWRLENKDITIIKPTTYMNLSGTAVKKVVNEKILKNLP-ESLIVIHDDVDMPLGKIKIKKNGSSGGHKGVQSIIDSL-GTKDFIRIKIGIGKNPYQ-DVSEYVLSPFTSEQRAKIQEKISEAVESIVVIINEGVNKAMNIYNRL 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRPZ (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRPM (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M28 GN=pth PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRPD (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pth PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRPC (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=pth PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRPB (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=pth PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRP3 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M3 GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVCFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRP1 (Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes serotype M1 GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKY 888
            + VGLGNPG KY+ T+HN+GF  ID   ++  ++  +  + KA  G  F+    V   KP T+MN SG +   L  YY + +  ++V +DD+ +                   KS++ +  G +EF R+++GIGRP   M     ++ +FN      I   L   V  +K  L +   E      T+QK+
Sbjct:    4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHI-GTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE-----KTMQKF 187          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_PSESM (Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv. tomato GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG-------QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 825
            L VGLGNPG +Y+ TRHN G   ++  A +Q +  N V  +  FG       QG      V L  P TYMN SG++   LA +Y++P+  +LV HD++ LP GV               + ++        F RLR+GIG P        F+L +     +E++D ++   + VL
Sbjct:    6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRV--NLVPERKFFGLTGRFTHQG----QDVRLLIPTTYMNRSGQAVAALAGFYRIPIESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVL 174          
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_PROMA (Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus GN=pth PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18
Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 1
Query:  322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGI--SMNTVHCKATFGQGF---VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPP-GQMDPK----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 876
            L  GLGNPG KY  TRHNVGF  ++  A+ + +  +MN    K  FG      +G     L  P TYMN SG S      ++ L +N++L+F DDM LP G                K ++ +  G+++F RLRIGIG P   Q D K      +L KF+    + I   L + ++ L+++   GL +     N+
Sbjct:    8 LLAGLGNPGSKYTSTRHNVGFMALERLAKKESVQFAMN----KKIFGHIANIEIGANKRKLLMPNTYMNESGRSISAAIKWFDLEINQILIFVDDMDLPLGKLRFREGGGSGGHNGLKDIIKHL-GSQDFCRLRIGIGPPSINQGDRKQKTIPHVLGKFDQAESKVITKVLDKVIKGLEVIEQYGLVKGTSFLNS 197          
The following BLAST results are available for this feature:
BLAST of DY263115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PTH_THEYD7.544e-1829.63Peptidyl-tRNA hydrolase OS=Thermodesulfovibrio yel... [more]
PTH_STRPZ7.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPM7.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPD7.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPC7.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRPB7.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRP37.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_STRP17.544e-1830.00Peptidyl-tRNA hydrolase OS=Streptococcus pyogenes ... [more]
PTH_PSESM7.544e-1832.57Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv... [more]
PTH_PROMA7.544e-1833.33Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DD09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263115 ID=DY263115; Name=DY263115; organism=Citrus clementina; type=EST; length=1228bp
ACACATTCACTCACACACGTCCTCTCTGCAGCCACAGCCGCCGCTTACAA
ACGCCCCTCTAACCCTAAGCTGACAAACGCCCACGCCCACGCCCACGCTG
CCGGCGCTGTCACTTTGGTTCAAGTGTGCCGACGCTGCAGCTTCTAGCCG
TTCTCGATTTGCTTCCTCGTTCCAGCTGCTGCGCTGCCTCCGGCTTCGTT
CGCCGTCGTCAGCCGTCGTCAGCCGCACAAGTGAAGTGGAAGGAAACTGA
GAACATTTGAGGAGATGCTTATTAACAGGTTTCTGAGGCGTGGTTTCTGC
ACTGCTGTTGCTCGGCCATGGCTTTTTGTGGGGTTGGGTAACCCGGGAGA
TAAATACAAAGGAACTAGACACAATGTGGGGTTTGAGATGATCGACGCAT
TTGCTGAATCACAAGGGATTTCTATGAACACGGTTCATTGCAAAGCTACT
TTCGGACAAGGTTTTGTTGGTGATGCCCCTGTACTCCTTGCAAAGCCACA
GACTTACATGAATCTGAGCGGTGAATCTACTGGACCACTTGCAGCTTATT
ATAAGTTACCTCTTAATCGTGTTCTTGTGTTTCATGATGACATGGGCTTA
CCTTGTGGAGTGCTTCGTCTGCGCCACAATGGAGGTCATGGAGGCCACAA
TGGGCTGAAGAGTGTGATGAACAACTTTCGAGGTAACCGAGAATTTGCTC
GGCTAAGAATTGGTATTGGGAGGCCTCCTGGTCAAATGGATCCTAAAGCT
TTCTTGCTGCAGAAGTTTAATGCAATAGCTCGAGAGCGAATTGATACTGC
TTTGCAAGAAGGGGTTGAGGTTCTGAAGCTGCTTTTATCTAAAGGCTTGA
CAGAGAGTGCTAGACATTTCAACACCATACAAAAATACAAGCACATAAGA
TTGCAAAACATGCCAGCATGAGCTATTGGTACCTTCGATGACAACCACAA
AAGCACCGAATGGTTCTTCTGGCCGCATTTGTATAAAACTTACAATATTT
AAAATCCCCGAGGAGAGAGGAAGCGAAACCACCCATCCCCATGGAAAGAA
AACTTCAACCAACTTAAGTGAAGGGCTTAACCCAATACCAAACTGAATTG
GTTTGGCTGTTTTTTTTGCAGCAAATCAACCTTCCCAAAATTGGGAAAAT
TTTCCCCATGGCTAGGGCCCGAACCCAAAGGAAAGGGGCTGAACCATATT
AAAAAACAAAAAAACACCACCCCCCTTA
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