DY263115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_PROM3 (Peptidyl-tRNA hydrolase OS=Prochlorococcus marinus (strain MIT 9303) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18 Identity = 63/193 (32.64%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 882 L VGLGNPG KY GTRHN+GF +D A + +S + VG V L PQTYMN SG + ++ L ++++LV DDM LP G +S + + G ++F RLRIGIG P + + + +L F+ +D L E + L L+ GL + N Q Sbjct: 8 LLVGLGNPGSKYVGTRHNIGFMALDKLAGQKSVSFRPQTKFHGLMAEVGVGSERVRLLMPQTYMNESGRAIRAAIDWFGLEVDQLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSAIQHL-GTQDFCRLRIGIGAPGCTSEERRARTVSHVLGVFSRQESLLVDQVLDEVLIGLDLIQCLGLERAGNRLNAFQ 199
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_LACCB (Peptidyl-tRNA hydrolase OS=Lactobacillus casei (strain BL23) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18 Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 828 + VGLGNPG KY G++HN+GF ++D A+ ++++ + A + + L KPQT+MN SG + L +Y++ L+ + V DDM L G K ++ + G+ EF RL+IGI P Q ++L F+ + ID A+++ + L+ Sbjct: 3 MIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVKPQTFMNASGRAVRELMMFYQIQLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDII-SATGSDEFCRLKIGIQHPQRQR-VVDWVLTPFSKTDQPLIDDAIEKADDALE 169
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_LACC3 (Peptidyl-tRNA hydrolase OS=Lactobacillus casei (strain ATCC 334) GN=pth PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18 Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 828 + VGLGNPG KY G++HN+GF ++D A+ ++++ + A + + L KPQT+MN SG + L +Y++ L+ + V DDM L G K ++ + G+ EF RL+IGI P Q ++L F+ + ID A+++ + L+ Sbjct: 3 MIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVKPQTFMNASGRAVRELMMFYQIQLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDII-SATGSDEFCRLKIGIQHPKRQR-VVDWVLTPFSKTDQPLIDDAIEKADDALE 169
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_AGRT5 (Peptidyl-tRNA hydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pth PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 7.544e-18 Identity = 55/161 (34.16%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 + GLGNPG +Y G RHN+GF +DA + + KA +G +G VLL KP TYMNLSGES G ++KL ++ HD++ L G KS+ + +E+ RLR+GIG P + +L F R +D L Sbjct: 3 IIAGLGNPGAQYAGNRHNIGFMAVDALQRLPSFAPWSKKFKAEISEGEIGGEKVLLMKPLTYMNLSGESVGEAMRFFKLTPADIIAIHDELDLLAGRTRIKIGGGHGGHNGLKSL--DAHCGKEYRRLRLGIGHPGDKERVHGHVLGDFAKSDRVWLDPLL 161
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RHOPT (Peptidyl-tRNA hydrolase OS=Rhodopseudomonas palustris (strain TIE-1) GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP 726 LFVGLGNPG KY+G RHN+GF +ID A G S + G + + L KP TYMN SG + A++YK+ N + VFHD++ LP +S+ + GN ++ R+R+G+G P Sbjct: 3 LFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLKPLTYMNESGRAVQDAASFYKIGQNEIAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISAHI-GN-DYLRVRLGVGHP 135
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RHOPA (Peptidyl-tRNA hydrolase OS=Rhodopseudomonas palustris GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP 726 LFVGLGNPG KY+G RHN+GF +ID A G S + G + + L KP TYMN SG + A++YK+ N + VFHD++ LP +S+ + GN ++ R+R+G+G P Sbjct: 3 LFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLKPLTYMNESGRAVQDAASFYKIGQNEIAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISAHI-GN-DYLRVRLGVGHP 135
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RALEH (Peptidyl-tRNA hydrolase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP--------PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 861 L VGLGNPG +Y+ TRHN GF ++D A G +M + + D + L KP T+MN SG + LA +YK+ + ++V HD+M LP G K + + +++ RLR+G+G P G+ D F+L+ +E ID A+ +E L LL++G E A Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGGATMRVEGRFHGLAARARLWDQDIWLLKPSTFMNRSGLAVVSLARFYKVLPDEIVVAHDEMDLPAGAAKLKRGGGAGGHNGLKDISAHL-STQDYWRLRLGVGHPRNAPGGAGAGREDVVNFVLKPPRREEQEAIDAAIDRCIEPLG-LLARGDAERA 190
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_PSE14 (Peptidyl-tRNA hydrolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG-------QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 825 L VGLGNPG +Y+ TRHN G ++ A +Q + N V + FG QG V L P TYMN SG++ LA +Y++P+ +LV HD++ LP GV + ++ F RLR+GIG P F+L + +E++D ++ + VL Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRV--NLVPERKFFGLTGRFTHQG----QDVRLLIPTTYMNRSGQAVAALAGFYRIPVESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVL 174
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_MYCAP (Peptidyl-tRNA hydrolase OS=Mycoplasma agalactiae (strain PG2) GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 61/192 (31.77%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 897 L VGLGNPG++Y+ TRHN GF ID E IS+N K F F +LAKP TYMN SG+ +A++YK+ + ++V +DD+ G + +M+ F N +F R+R+GIG G K ++L F ++ L++ + L+ + FNT K + I Sbjct: 3 LIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLN----KEKFNGEFAVSDGFILAKPLTYMNKSGDFVYSIASFYKINPSDIIVIYDDLSFSIGQAAIKIGGSSAGHKGIERLMSKFSSN-DFKRIRVGIGVNSG-TTIKDYVLSLFTKDEMIVVEEVLEKVADAAISLVYNDVNFVMNKFNTDNKKRVI 188
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_LACDB (Peptidyl-tRNA hydrolase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=pth PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 9.853e-18 Identity = 51/168 (30.36%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 825 L V LGNPG KY+ T+HN GF +D + + +G+ ++ A + + V V+ +PQTYMN SG + G A ++K+ + +LV HDDM +P KS++ G +F RL+IGI R P + +++L FN ++ ++ + + +++ Sbjct: 3 LIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFMEPQTYMNESGRAVGAAAKFFKIDPSDILVIHDDMDMPIAKLRIRAGGKSGGHNGIKSIIACL-GTEKFNRLKIGI-RHPDKQSVVSWVLTPFNPDQQKELEASFAKVDQII 168 The following BLAST results are available for this feature:
BLAST of DY263115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263115 ID=DY263115; Name=DY263115; organism=Citrus clementina; type=EST; length=1228bpback to top |