DY263115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_GRABC (Peptidyl-tRNA hydrolase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=pth PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.867e-17 Identity = 59/178 (33.15%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 855 L+ GLGNP RHN+GF +DA A+ G + K +G + ++L KP TYMN SGES P A++KLP V FHD++ L G +S M+ G E+ R+R+GIG P + +L F +E + L E V LL++G E Sbjct: 6 LWTGLGNPEPGMALQRHNIGFMAVDAIAQRHGFTPWRNRFKGLTAEGTLAGRKIILLKPMTYMNASGESVQPATAFFKLPPEAVSAFHDELDLAPGKVRVKRGGGAAGHNGLRS-MDRMLGTPEYWRVRLGIGHPGSKERVHGHVLGNFAKSDQEWLGPLL-EAVADAAPLLAEGRAE 181
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_STRMU (Peptidyl-tRNA hydrolase OS=Streptococcus mutans GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 57/186 (30.65%), Postives = 87/186 (46.77%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESARHFN 873 L VGLGNPG KY T+HNVGF +D + + KA F+ + KP T+MN SG + AYY L + ++V +DD+ + G KS++ G +EF R++IGIGRP +M ++L KF+ I L + + + L +K ++ + FN Sbjct: 4 LIVGLGNPGSKYHETKHNVGFMALDRIVKPLNVQFTENKTFKAETVATFINGEKIYFIKPTTFMNASGLAVRAFLAYYNLTVEDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIKEI-GTQEFDRIKIGIGRPKDKMTVVNYVLGKFDKKDEITIFNTLDKVDKAVNYYLQTKNFEQTMQKFN 188
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_SHEFN (Peptidyl-tRNA hydrolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 55/190 (28.95%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG---QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQ 882 L VGL NPG +Y TRHN G + A + + V FG + + V L P TYMNLSG+S LA ++++ +LV HD++ + GV K ++ + ++ F RLRIGIG P + ++L + A+ +ERI+ A+ E V ++L ++ + ++ ++ + Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVQELARICNVPL--VAESKYFGVTARATLHGRDVRLLIPTTYMNLSGKSVAALANFFRILPEEILVAHDELDMDPGVAKFKLGGGHGGHNGLKDIIASLGNDKNFHRLRIGIGHPGDKNKVSGYVLGRAPAVEQERINAAIDEAVRSTEILFNQDMAKAMHRLHSFK 193
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RICCK (Peptidyl-tRNA hydrolase OS=Rickettsia canadensis (strain McKiel) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 56/179 (31.28%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 328 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT---VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 855 +GLGNPG +Y+ TRHN+GF +I+ A +S +T +C+ + V ++ KP TYMNLSG+S + YY + ++ V HDD+ L G KS+ + GN + R+RIG+GRP D ++L F E + ++ + L+L L E Sbjct: 5 IGLGNPGKEYQYTRHNIGFIVIEKIANQYNLSFSTKKKFNCEIV--ESSVEKQKLIFIKPTTYMNLSGKSVISVKTYYNICSEKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSI-DRVIGN-NYNRIRIGVGRPQNNQDVADYVLNNFPRSEYEIVIQSIDKITNNFDLILENKLEE 179
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_MYCS5 (Peptidyl-tRNA hydrolase OS=Mycoplasma synoviae (strain 53) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 822 L VGLGNPGDKYK TRHNVGF +ID + I+++ + T G + ++AKP TYMNLSG LA ++K+ + +LV HD+ G V+N + F RL+IGIG+ +M K ++LQ+F+ ++ L + +V Sbjct: 3 LIVGLGNPGDKYKFTRHNVGFLVIDLICQKLKITLDK---EKTHG-SYAKFEDFIIAKPNTYMNLSGNFVLELANFFKIAPDDILVIHDEKDFELGKSAIKIGGSGGSHNGVLDVINKL-NTQNFKRLKIGIGQNQ-EMALKDYVLQRFSLEEFSVLEPVLNQAADV 163
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_BRUSU (Peptidyl-tRNA hydrolase OS=Brucella suis GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV---MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 L GLGNPG +Y RHN+GF D S +A G + VLL KPQT+MNLSG+S G +YKL ++V +D++ L G KS+ M +F G + + R+R+GIG P + ++L F E +DT + Sbjct: 3 LIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVKPQTFMNLSGQSIGEAMRFYKLTPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLM 166
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_BRUSI (Peptidyl-tRNA hydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV---MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 L GLGNPG +Y RHN+GF D S +A G + VLL KPQT+MNLSG+S G +YKL ++V +D++ L G KS+ M +F G + + R+R+GIG P + ++L F E +DT + Sbjct: 3 LIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVKPQTFMNLSGQSIGEAMRFYKLTPADLVVIYDELDLVPGKLRIKTGGGPGGHNGIKSIDAHMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLM 166
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_BRUO2 (Peptidyl-tRNA hydrolase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV---MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 L GLGNPG +Y RHN+GF D S +A G + VLL KPQT+MNLSG+S G +YKL ++V +D++ L G KS+ M +F G + + R+R+GIG P + ++L F E +DT + Sbjct: 3 LIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVKPQTFMNLSGQSIGEAMRFYKLTPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLM 166
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_BRUME (Peptidyl-tRNA hydrolase OS=Brucella melitensis GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV---MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 L GLGNPG +Y RHN+GF D S +A G + VLL KPQT+MNLSG+S G +YKL ++V +D++ L G KS+ M +F G + + R+R+GIG P + ++L F E +DT + Sbjct: 3 LIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVKPQTFMNLSGQSIGEAMRFYKLTPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLM 166
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_BRUMB (Peptidyl-tRNA hydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=pth PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.744e-17 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV---MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 804 L GLGNPG +Y RHN+GF D S +A G + VLL KPQT+MNLSG+S G +YKL ++V +D++ L G KS+ M +F G + + R+R+GIG P + ++L F E +DT + Sbjct: 3 LIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVKPQTFMNLSGQSIGEAMRFYKLTPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLM 166 The following BLAST results are available for this feature:
BLAST of DY263115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263115 ID=DY263115; Name=DY263115; organism=Citrus clementina; type=EST; length=1228bpback to top |