DY263115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_PSEF5 (Peptidyl-tRNA hydrolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pth PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 4.890e-17 Identity = 57/175 (32.57%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG-------QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 825 L VGLGNPG +Y+ TRHN G ++ AE QGI N V + FG QG + L P TYMN SG++ LA ++++ +LV HD++ LP GV + ++ F RLR+GIG P F+L + +E++D ++ + VL Sbjct: 6 LIVGLGNPGTEYEQTRHNAGALFVERIAEKQGI--NLVADRKYFGLTGRFSHQG----QDIRLLIPTTYMNRSGQAVAALAGFFRIKPEEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVL 174
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_METS4 (Peptidyl-tRNA hydrolase OS=Methylobacterium sp. (strain 4-46) GN=pth PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.890e-17 Identity = 52/158 (32.91%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERID 795 LFVGLGNPG +Y RHN+GF +DA A + + + +G VLL KP+TYMN SG + +YK+ L+ V+VFHD++ L +S+ + E+ R+R+GIG P + A++L F R +D Sbjct: 3 LFVGLGNPGARYAANRHNIGFMALDAVARRHRAAPWRRKFQGEASEAVIGTERVLLLKPETYMNESGRAVAEAQRFYKIALDDVVVFHDELDLAPAKVRVKKGGGNAGHNGLRSI--TAQCGNEYWRVRLGIGHPGDKALVHAYVLNDFAKAERPWVD 158
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_EHRCR (Peptidyl-tRNA hydrolase OS=Ehrlichia chaffeensis (strain Arkansas) GN=pth PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.890e-17 Identity = 59/197 (29.95%), Postives = 96/197 (48.73%), Query Frame = 1 Query: 319 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPG----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 897 +L GLGNPG KY+ +RHN GF ++DA A A G + V+L KP T+MN SG +A+ YK+PL+ +++FHD++ + KS+ N +++ R+R GIGRP ++D ++L +F+ I + ++ + VE + LLL K + + KY+ I Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKPWTFMNNSGAPIMSIASLYKIPLDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDNLL--GKDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHNI--KAVNNTILNIVEHITLLLEKKPSMFMEKVKNLIKYEDI 195
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_CHRVO (Peptidyl-tRNA hydrolase OS=Chromobacterium violaceum GN=pth PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.890e-17 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFA-ESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 885 L VGLGNPG +Y+ TRHN GF ++D + +G + + + V L KP TYMNLSG++ LA +YK+ + +LV HD++ L GV K + + F RLR+GIG P + + F+L+K A ++ +D A+ + L +S + E+ + +T K Sbjct: 6 LIVGLGNPGPEYEKTRHNAGFWLVDELCWQFKGNWRSEGKFHGDVARIQIEGQDVWLLKPMTYMNLSGQAVLALAHFYKILPDEILVVHDELDLAPGVARFKQGGGHGGHNGLKDIAARL-SSPAFWRLRLGIGHPGDKKEVANFVLKKPRAEEQQALDEAVLASLRELPRAVSGKMAEAMKALHTEAK 193
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_THICR (Peptidyl-tRNA hydrolase OS=Thiomicrospira crunogena (strain XCL-2) GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP--------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 876 L VGLGNPG +Y+ TRHN GF ++ A + F+G+A V L KP T+MN SG+S +A +YK+ +LV HD++ L GV + + G ++F RLR+GIG P + ++L+ + R ID A+ + VL LL+ + + +T Sbjct: 6 LIVGLGNPGGQYEQTRHNAGFWFVEDVARQYNVQFRPE-------TKFLGEAARIQSNGLDVWLLKPMTFMNRSGQSIQAIAKFYKIAPEEILVVHDELDLDPGVARLKTSGGHGGHNGLRDTIAAL-GTKDFKRLRLGIGHPGDRNQVVDYVLKAPSKTDRALIDDAIYDATRVLPDLLNDDMARAMNELHT 190
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RHOPS (Peptidyl-tRNA hydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 68/212 (32.08%), Postives = 98/212 (46.23%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA*AIGTFDDNHKST 957 LFVGLGNPG KY+ RHN+GF +ID A G S + G + + L KP TYMN SG + ++YK+ V VFHD++ LP +S+ + GN ++ R+R+G+G P + +L F R + AL E V L++KG A N + H+ LQ A G DD++K + Sbjct: 3 LFVGLGNPGSKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGSLDGERITLLKPLTYMNESGRAVQEAVSFYKIGHGEVAVFHDEIELPPAKLRVKVGGGIAGHNGLRSISAHI-GN-DYLRVRLGVGHPGVKELVHGHVLGDFAKSERPWV-AALAEAVADNAGLIAKG--REATFANKV----HLALQ-----ARGFLDDDNKKS 200
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_RALME (Peptidyl-tRNA hydrolase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 63/192 (32.81%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRP--------PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 861 L VGLGNPG +Y+ TRHN GF ++D A G T+ ++ F G+ + D V L KP T+MN SG S LA +YK+ + ++V HD+M LP G K + + +++ RLRIG+G P G+ D F+L+ ++ ID A+ + L L++G +E A Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGG---TTLRVESRFHGLAGRARLWDQDVWLLKPSTFMNRSGLSVVSLARFYKILPDEIVVAHDEMDLPAGSAKLKRGGGSGGHNGLKDISAHLT-TQDYWRLRIGVGHPRNAPGGAAGGREDVVNFVLKPPRKEEQQAIDEAIDRCIGPLG-TLARGESERA 190
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_LACGA (Peptidyl-tRNA hydrolase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 52/168 (30.95%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 825 L GLGNPG KY T+HN GF +D + + ++ + + + V V+ +PQT+MN SG+S +A ++K+ +LV HDDM +P G KS+M G F RL+IGI R P + +++L FN ++ +D A + ++ Sbjct: 3 LIAGLGNPGKKYDQTKHNTGFMALDHYLSKNNLDLDKDKFEGLWTKQKVNGEDVIFLEPQTFMNDSGKSIAQVANFFKIAPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACL-GTNNFNRLKIGI-RHPQKESVVSWVLSPFNDEQQKLMDAAFEVSENII 168
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_EHRRW (Peptidyl-tRNA hydrolase OS=Ehrlichia ruminantium (strain Welgevonden) GN=pth PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 58/192 (30.21%), Postives = 85/192 (44.27%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 897 L VGLGNPG +Y+ TRHNVGF +IDA A G + V+LAKP T+MN SG + YK+PL+ ++VFHD+ + KS+ R++ R+R GIG P D +L +FN + ++ + +E + LL + + KY I Sbjct: 4 LLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIRSHKVILAKPYTFMNNSGTPISSIVKLYKIPLDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDTLL--GRDYWRIRFGIGHPSNGYDLSYHVLSQFNNL--NAVNNTISNIIEHISLLFENDKSIFKNKVKDLIKYTDI 191
BLAST of DY263115 vs. ExPASy Swiss-Prot
Match: PTH_EHRRG (Peptidyl-tRNA hydrolase OS=Ehrlichia ruminantium (strain Gardel) GN=pth PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 6.387e-17 Identity = 58/192 (30.21%), Postives = 85/192 (44.27%), Query Frame = 1 Query: 322 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHI 897 L VGLGNPG +Y+ TRHNVGF +IDA A G + V+LAKP T+MN SG + YK+PL+ ++VFHD+ + KS+ R++ R+R GIG P D +L +FN + ++ + +E + LL + + KY I Sbjct: 4 LLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIQSYKVILAKPYTFMNNSGAPISSIVKLYKIPLDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDTLL--GRDYWRIRFGIGHPSNGYDLSYHVLSQFNNL--NAVNNTISNIIEHISLLFENDKSIFKNKVKDLIKYTDI 191 The following BLAST results are available for this feature:
BLAST of DY263115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263115 ID=DY263115; Name=DY263115; organism=Citrus clementina; type=EST; length=1228bpback to top |