DY263121

Overview
NameDY263121
Unique NameDY263121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1221
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.787e-11
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = 1
Query:  502 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCESEEE 789
            YRGVR+RPWGK+AAEIRDP +R  RVWLGTF+T               RG +A LNFP        ++ VA + D  A+A A  +    D    E+
Sbjct:  136 YRGVRQRPWGKFAAEIRDP-KRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAAD-DIGAKASASASVSATDSVEAEQ 229          
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.334e-11
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  502 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLE 681
            YRG+R+RPWGK+AAEIRDP R+G R WLGTFDT             ++RG+KA +NFP E
Sbjct:  128 YRGIRQRPWGKWAAEIRDP-RKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186          
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.334e-11
Identity = 35/59 (59.32%), Postives = 39/59 (66.10%), Query Frame = 1
Query:  499 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFP 675
            HYRGVR+RPWG+YAAEIRDP ++  RVWLGTFDT              LRG KA  NFP
Sbjct:   11 HYRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68          
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.049e-11
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query:  502 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFP 675
            YRGVR+RPWG+YAAEIRDP ++  RVWLGTFDT             + RG+KA  NFP
Sbjct:   20 YRGVRKRPWGRYAAEIRDPFKKS-RVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.982e-11
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  502 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNF---PLEAGKCDSNAAVARECDSSAE 738
            +RG+R+RPWGK+AAEIRDP R+GVRVWLGTF++             ++RG KA +NF   P  A K  + +  A+   SS E
Sbjct:  120 FRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVE 200          
BLAST of DY263121 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.982e-11
Identity = 45/120 (37.50%), Postives = 57/120 (47.50%), Query Frame = 1
Query:  502 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCESEEEERKAKVVKTESADTVNEFPLTPAS 861
            YRGVR+RPWGK+AAEIRDP  +  RVWLGTFD              + RG+KA LNFP        N  + R   + A+    +T  +R  +S             S  T    P+ PAS
Sbjct:  185 YRGVRQRPWGKWAAEIRDPF-KAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP-------ENVKLVRPASTEAQP-VHQTAAQRPTQSR-----------NSGSTTTLLPIRPAS 284          
The following BLAST results are available for this feature:
BLAST of DY263121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
EF109_ARATH1.787e-1142.71Ethylene-responsive transcription factor ERF109 OS... [more]
RAP22_ARATH2.334e-1156.67Ethylene-responsive transcription factor RAP2-2 OS... [more]
ERF81_ARATH2.334e-1159.32Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF76_ARATH3.049e-1156.90Ethylene-responsive transcription factor 11 OS=Ara... [more]
ERF1_ORYSJ3.982e-1146.34Ethylene-responsive transcription factor 1 OS=Oryz... [more]
ABR1_ARATH3.982e-1137.50Ethylene-responsive transcription factor ABR1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DE03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263121 ID=DY263121; Name=DY263121; organism=Citrus clementina; type=EST; length=1221bp
TTCAAAAACTCTATAAGGGACACAGCTTGCTTAGTTGCCATGGCTACACC
AATTGAAAAATCAGCGCTCGAGTTTATCGAGCAACATTTGTTCGGCGAAA
ATTCTCCTATTGCGGGATTTAGTTCGAGTTTGTCGAGCGACACTTGCTCG
CAATCGCAAACGTCCAGCTCTGCATCTTCAGATCGTAGTTTCTTCAACGA
TGCCGTTTTCTTCGACTATGAATCCAAACCTCAAATCATTGATCTTGTTA
CACCGCAACCCACTAATACTTGCTCTGAATTGACTAACGATTTCTTTGAA
TTTGACATTAGACCTCAAATCCAATCGCAACCGAGCAATTGTAGCTCGGA
ATTCGAACCCAAGCCTAAAATATCTCCAAATTCATCCTCTCAATCGTCTC
GCAAACCGTCGCTGAAAATCTCAGTGCCTAAGAAAGCCGAAGGTCATCAT
TTCACCAACCGGAAAAGCAAGGCCAAACCTGAGAGTTCGGAAGAAAAGCA
TTACAGAGGAGTTCGACGGAGGCCGTGGGGAAAGTACGCGGCCGAGATCC
GAGATCCTACCCGGAGAGGCGTACGTGTCTGGCTGGGGACATTTGACACG
GCCATTGAAGCAGCTAGGGCGTACGACCGTGCCGCTTTCCAGCTGCGCGG
CTCGAAAGCGATCCTCAACTTTCCTCTTGAAGCCGGCAAGTGCGACTCAA
ACGCTGCGGTGGCTAGAGAGTGTGACTCGAGCGCCGAGGCTGGCGCGTGT
GAAACGAAACGGAAGAGGGACTGTGAAAGCGAAGAAGAGGAGAGAAAAGC
CAAGGTGGTGAAAACGGAGTCTGCGGATACAGTTAATGAATTTCCTTTGA
CGCCGGCGAGTTGCGCGGCGTTTTGGGACTTGCATTTGGACTGGGACTGT
GGTGTGAAAGGGATATTCAACGCCCCTCTACTGTCGCCGTTATCGCCTCA
AACGTTTGAATGGTCTTTGACTTTTGACTTTGAGTAGTATATTGGGCGTG
GCGGGTATTATGTCTGACGTGGAGCTTTCGGATGGACATGCCCATATAAA
TCTTTTTGAAAAAAAAAATTACTTTTTGGATTATTCCTGGAACCTTAAAA
AAGGAATTGATTGAATTTATTTCTTACTAAATTGGGGGCCAAAAAGGCTT
CAGTTTAAAAGAAATTTTTGCGGGAATCCGGATTCCCTTTTTCCCTTTTT
TTCCCTTTTCCCCGTGGGGGA
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