DY263130

Overview
NameDY263130
Unique NameDY263130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1221
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.167e-25
Identity = 72/254 (28.35%), Postives = 123/254 (48.43%), Query Frame = 3
Query:  243 QAANSTKHHHMWIGPVGHRVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPI----YVGRAMGQYSRNCLL 983
            QA N T H            +TV  +GSG+ ++V  AV  VP++ +   +I + AG Y+E V +   K  +   G GRD+T+I       D       +RT+ T++       F  +++   NTA     G +  QA AFR   D++ +  C F G QDTL   + R Y++ C + G++DFIFG G  +++ C +     +  +F +I A   +  ++ TG +  +C  +  G +    Y+GR    +S+  ++
Sbjct:  653 QAKNLTPH------------VTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDG------VRTFNTSTFATEGKGFMMKDMGIINTA-----GPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTATTYLGRPWKLFSKTVIM 883          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.831e-25
Identity = 74/238 (31.09%), Postives = 118/238 (49.58%), Query Frame = 3
Query:  306 TVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCR---------ETGTGPIYVGRAMGQYSRNCLL 983
            TV ++GSG++K+++ A+D+VP++N    +I I AG Y E + +P S   +   G G  +T I  +    D  +      T+ T +V V    F A+NI F+NTA     G +  QA A R+S DKA    C   G QDTL     R ++++C I G++DFIFGNG ++ ++C++        +   + A  R  P +K       C           +     Y+GR   +YSR  ++
Sbjct:   60 TVALDGSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPS------TFHTTTVGVNGANFVAKNIGFENTA-----GPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIM 286          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.831e-25
Identity = 73/270 (27.04%), Postives = 128/270 (47.41%), Query Frame = 3
Query:  246 AANSTKHHHMWIGPVGHRVI------------TVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSRNCLL 983
            +A  T H   W+     R++            TV  +GSG F ++ AA+ ++P + +    I I  G Y E V +   KP +T  G G  +T++  +       ++ +++RT+ TA+       F A+++ F+NTA     G +G QA A R+  D++ F  C F G QDTL     R Y++ C I G++DFIFG+  +++++C++     +  +  ++ A  R    + TGF    C       +         Y+GR    +SR  ++
Sbjct:  266 SAKETDHITSWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNK------SHAKKIRTFLTATFVAQGEGFMAQSMGFRNTA-----GPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVM 524          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.831e-25
Identity = 77/235 (32.77%), Postives = 119/235 (50.64%), Query Frame = 3
Query:  294 HRVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS-----IAAHDRKSPDEKTGFAFVRCRETGTGPIYVGRAMGQYSRNCLL 983
            H V+  D  GSG   SV  A+ S+ E+     +I ++AG Y E + +P  +  +   G G+ +TVI          +N     TYQ+A+V    + F AR+I+F N+A     G    QA A R+  D++    C   G QD+L   + R +++E  I G++DFIFGN   +++ C L    +R GS     + A  R  P++ TG +   CR TG+   Y+GR   QYSR  ++
Sbjct:  228 HAVVAAD--GSGTHMSVAEALASL-EKGSGRSVIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVI------VGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSA-----GPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNL---VSRKGSSDQNYVTAQGRSDPNQNTGISIHNCRITGSTKTYLGRPWKQYSRTVVM 445          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.828e-25
Identity = 74/233 (31.76%), Postives = 119/233 (51.07%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDS---VPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPIYVGRAMGQYSRNCLL 983
            + V  +GSG + S+Q AV++   +P RN+  ++I + AG Y E V +  S   +   G G D T++  +    D         T+++A+  V  N F A+ I+F+NTA     G +  QA A R S D + F  C F G QDTL   + R + + C I G++DFIFG+  ++ ++C +++   ++ +  +I A  RK PDE TGF             Y+GR    +SR   +
Sbjct:  251 LVVAKDGSGHYTSIQQAVNAAAKLPRRNQ-RLVIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTT------TFRSATFAVSGNGFIAQGITFENTA-----GPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASETYLGRPWRSHSRTVFM 471          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 4.828e-25
Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  552 TASVTVFANYFSARNISFKNT-----APAPLPGMQGWQ---AAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIA------TRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPIYVGRAMGQYSR 971
            +++ T + ++   RN+S  NT     +     GM  W    A A  + GDK+ F  C F G QDT+ D+ GRH+FK CYIEG+IDFIFG+G+S+Y+DC +++ A        FG I A  R S  + +GF F+R   +G+  +Y+GRA G +SR
Sbjct:   61 SSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMS-WDIKPAVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSR 213          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.396e-24
Identity = 75/239 (31.38%), Postives = 118/239 (49.37%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFG---SIAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSRNCLL 983
            ++V ++G+G F ++  AV + P  +    +I I  G Y E V +P  K  I F G G  +TVI+ +    D  +      T+QT +V V    + A++ISF N+A     G    QA AFR   D + F  C F G QDTL   + + +++EC I G+IDFIFGN   ++++  L++     G   +  A  R   D+ TG + + CR      +         Y+GR   +YSR  ++
Sbjct:  222 LSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWS------TFQTPTVGVKGKGYIAKDISFVNSA-----GPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVII 449          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 4.087e-24
Identity = 77/243 (31.69%), Postives = 118/243 (48.56%), Query Frame = 3
Query:  300 VITVDVNGSGEFKSVQAAVDSVPERNRMN---VLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFG---SIAAHDRKSPDEKTGFAFVRC---------RETGTGPIYVGRAMGQYSRNCLL 983
            ++TV  NG+G F ++ AA+ + P +   +    LI ++AG Y E V VP +K Y+   G G ++TVI  +    D         T+ +A+  +    F   NI+ +NTA  P  G    QA A R  GD + F  C F   QDTL   + R +++EC + G++DFIFGN   + ++C L+    R G    + A  R  P++ TG A   C             T   Y+GR   +YSR  ++
Sbjct:  245 IVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWT------TFNSATFILSGPNFIGVNITIRNTA-GPTKG----QAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVM 476          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.106e-24
Identity = 82/287 (28.57%), Postives = 130/287 (45.30%), Query Frame = 3
Query:  189 VTSFLSLALFQVTISATAQAANSTKHHHMWIGPVGHRVITVD---------VNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRET----------GTGPIYVGRAMGQYSRNCLL 983
            VTS +   L QV  ++  Q  N       W+     +++  D          +G+G F +V  AV + P+ +    +I I  G Y E V +   K  +   G G D T+I  +    D         T+++A+  V    F AR+I+F+NTA     G +  QA A R   D + F  C   G QDTL     R ++++C I G++DFIFG+   ++++C++     +  +  SI A  RK P+E TG +   C  T           + P Y+GR    YSR  ++
Sbjct:  164 VTSLVQELLTQVHPNSNQQGPNG--QIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWT------TFRSATFAVSGRGFIARDITFENTA-----GPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIM 437          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.106e-24
Identity = 76/258 (29.46%), Postives = 117/258 (45.35%), Query Frame = 3
Query:  276 WIGPVGHRVITVD----------VNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCR---------ETGTGPIYVGRAMGQYSRNCLL 983
            W+ P   +++  D           +G+G F ++  AV + P+ +    +I +  G Y+E V +   K  I   G G D TVI  +    D         T+++A+  V    F AR+I+F+NTA     G +  QA A R   D   F  C   G QDTL   + R +F+EC I G++DFIFG+  ++++ C++     +  +  SI A  RK P+E TGF                  T   Y+GR    YSR   +
Sbjct:  196 WVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWT------TFRSATFAVSGRGFIARDITFQNTA-----GPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFM 442          
The following BLAST results are available for this feature:
BLAST of DY263130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME26_ARATH2.167e-2528.35Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN2.831e-2531.09Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME45_ARATH2.831e-2527.04Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME35_ARATH2.831e-2532.77Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME6_ARATH4.828e-2531.76Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME52_ARATH4.828e-2540.26Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME39_ARATH2.396e-2431.38Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH4.087e-2431.69Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE9.106e-2428.57Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME32_ARATH9.106e-2429.46Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DE12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263130 ID=DY263130; Name=DY263130; organism=Citrus clementina; type=EST; length=1221bp
CAAATTTGTTCGGCTTATAAATGCTTCTCTCTTAAATTTCCAACTTCCAT
TGTACTTGCACTCATTCAATTAAATTTCTCGGAGCCTCTTCGAAAGCAGA
TTACACACGTTCTCTCTGACAATTTTAAATAATGCTGTTTAATTTAATGT
CATCTGTTACTTGTTTTTCGTTCTTTCACTTGTACATTGTTACTTCTTTC
TTGTCTCTTGCATTGTTTCAGGTTACGATCTCGGCCACAGCTCAAGCTGC
AAATTCTACTAAGCACCATCACATGTGGATTGGACCCGTCGGCCACCGTG
TAATCACCGTTGATGTTAATGGGTCCGGCGAGTTCAAATCGGTCCAAGCT
GCCGTTGATTCCGTCCCTGAAAGAAACAGAATGAACGTGCTTATTCAAAT
TAGCGCAGGTTGTTACATAGAGAAGGTGACGGTGCCAGTGTCGAAACCGT
ACATCACGTTTCAAGGTGCAGGGAGGGATCGGACGGTGATCGAGTGGCAT
GATCGAGCATGTGATCGTGGGGCTAATGGCCAGCAGCTGCGCACTTACCA
GACAGCTTCTGTAACTGTTTTTGCTAATTATTTCTCTGCTAGGAATATTA
GCTTCAAGAACACAGCGCCAGCACCACTACCAGGAATGCAAGGGTGGCAA
GCGGCGGCGTTTAGGATATCCGGAGACAAGGCTTACTTCTCAGGCTGTGG
ATTTTATGGGGCACAGGACACTCTTTGTGACGACGCAGGGCGGCATTACT
TCAAGGAATGTTACATTGAAGGCTCCATCGACTTTATTTTCGGGAATGGC
CGGTCCATGTACAAAGACTGTGAGCTGCATTCAATAGCCACAAGATTCGG
GTCAATTGCGGCCCACGATAGAAAATCGCCGGATGAGAAGACAGGATTTG
CTTTTGTACGATGCAGGGAAACGGGGACCGGCCCCATATATGTGGGCCGA
GCCATGGGCCAGTACTCGAGAAATTGTTTACTCATTCCTTTACTTTGACA
ACTTGGTTGCTCCACGGGGGTGGGGATGATGGGGACCACATCATAAACAA
AAACAAGACTGCCTTTTTTCCGAAGGGAAAAGTTGTTGGGGGGCCGGGAA
CAACAAAACCTTCCCGGGCGGGCCCCGGGGGCTAAAAAAACCGGGAATTA
AAAAAACCACCCCCCTCCTTTTTTTTTGGTAAAAAAGATTTTTTTACAGG
GGGGGAGGGGGCGTGGGGAAT
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