DY263130

Overview
NameDY263130
Unique NameDY263130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1221
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.929e-22
Identity = 70/239 (29.29%), Postives = 112/239 (46.86%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSRNCLL 983
            + V  +G+G F ++  A+   P  +   VLI +  G Y E + +P+ K  I   G G D T I  +         G    T+++A++ V    F AR+I   NTA     G +  QA A R++ D      C   G QDTL   + R +++EC I G+ID+IFGN   +++ C + S   +  +F  I A  R + DE TG +   C    +  +         Y+GR   ++SR  ++
Sbjct:  238 LVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSV------GDGWTTFRSATLAVSGEGFLARDIMITNTA-----GPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVM 465          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.721e-22
Identity = 71/239 (29.71%), Postives = 117/239 (48.95%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERN---RMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGP----------IYVGRAMGQYSR 971
            +TV    +  F ++  AV + P      +   +I   AG Y E V +   K  I   G G ++T+I  +    D         TY +++  V  + F A +++F+NTA     G +  QA A R + D + F  C F G QDTL   + R +++EC I G+IDFIFGN  +++++C +++   +A +  ++ AH R  P++KTG + + C   G  P           ++GR    YSR
Sbjct:  308 VTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWT------TYNSSTFAVVGDRFVAVDVTFRNTA-----GPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINC-TIGAAPDLAADPKSTMTFLGRPWKPYSR 534          

HSP 2 Score: 24.6386 bits (52), Expect = 3.721e-22
Identity = 10/27 (37.04%), Postives = 12/27 (44.44%), Query Frame = 1
Query:  952 PWASTREIVYSFLYFDNLVAPRGWG*W 1032
            PW      VY   Y  ++V P GW  W
Sbjct:  528 PWKPYSRTVYIQSYISDVVQPVGWLEW 554          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.826e-22
Identity = 73/241 (30.29%), Postives = 115/241 (47.72%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEK-VTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IATRFGSIAAHDRKSPDEKTGFAFVRCR---------ETGTGPIYVGRAMGQYSRNCLLI 986
            I V  +G+G  K++  A+   P+ +   ++I + AG Y E  + V   K  + F G G+ +TVI       D       + T+ TAS       F AR+I+F+N A     G    QA A RI  D A    C   G QDTL   + R +F+EC I G++DFIFGN   + ++C +++   +  +  +I A +RK P++ TG +    R           G+   Y+GR    +SR   ++
Sbjct:  285 IIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDN------ITTFHTASFAATGAGFIARDITFENWA-----GPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMM 514          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.826e-22
Identity = 66/239 (27.62%), Postives = 115/239 (48.12%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSRNCLL 983
            I V  +GSG+++++  AV ++P+ ++  V++ +  G Y E V     K  +   G G D T+I       D         T+ +A+V    + F A++I F+NTA     G + +QA A RI  D+   + C     QDTL     R ++++  I G++DFIFGN   ++++C L     +  +  +I A  R  P++ TG +   C    +  +         Y+GR   +YSR  ++
Sbjct:  233 IVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGST------TFDSATVAAVGDGFIAQDICFQNTA-----GPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVM 460          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.996e-22
Identity = 71/229 (31.00%), Postives = 110/229 (48.03%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS---IAAHDRKSPDEKTGFAFVRCRETGTGPI--------YVGRAMGQYSR 971
            +GSG+FK++  A+ +VP +N +  +I + AG Y E V V     Y+T  G G  +T         D       + TY TA+  V    F A++I F+NTA     G    QA A R++ D+A F  C   G QDTL   + R ++++C I G+IDF+FG    ++++C+L       G    + A  R+  +  +   F     TG   +        Y+GR   QYS+
Sbjct:  137 DGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADG------INTYNTATFGVNGANFMAKDIGFENTA-----GTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKQYSK 354          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 4.996e-22
Identity = 70/239 (29.29%), Postives = 114/239 (47.70%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRET---------GTGPIYVGRAMGQYSRNCLL 983
            ++V ++G+G F  +  A+   P+ +    +I I  G Y+E V +   K  I   G G D TVI  +    D         T+++A+  V    F AR+I+F+NTA     G +  QA A R   D + F  C   G QDTL     R +++EC I G++DFIFG+G  ++++C++     +  +  +I A  RK  ++ +GF+      +          T   Y+GR    YSR   +
Sbjct:  213 VSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWT------TFRSATFAVSGRGFLARDITFQNTA-----GPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFI 440          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.523e-22
Identity = 76/241 (31.54%), Postives = 115/241 (47.72%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMN--VLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCR---------ETGTGPIYVGRAMGQYSRNCLL 983
            + V  +GSG F +VQAA+D    R   +   +I +  G Y E + V ++   I   G G   T+I        R   G    TY +A+  +   +F A+ I+F+NTA  P  G    QA A R S D + F  C   G QDTL   + R +++ECYI G++DFIFGN  +++++C +     +  +   I A  R  P + TG +    R           GT   Y+GR   ++SR  +L
Sbjct:  222 LVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITG-----GRSVQGGYT-TYNSATAGIEGLHFIAKGITFRNTA-GPAKG----QAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVL 451          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 8.523e-22
Identity = 66/239 (27.62%), Postives = 117/239 (48.95%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRET---------GTGPIYVGRAMGQYSRNCLL 983
            + V  +G+G+FK+V  AV + PE +    +I +  G Y E + +   K  +   G G+D T+I       D         T+++A+V    + F A++I F+NTA     G    QA A R+S D+   + C     QDTL     R ++++ YI G++DFIFGN   ++++C++   +  A +   + A  R+  ++ T  +  +C+ T         G+   ++GR    YSR  ++
Sbjct:  247 VVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGST------TFRSATVAANGDGFMAQDIWFQNTA-----GPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIM 474          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.388e-21
Identity = 76/239 (31.80%), Postives = 110/239 (46.03%), Query Frame = 3
Query:  294 HRVITVDVNGSGEFKSVQAAVDSVPERN-RMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSR 971
            H V+  D   SG F+S+QAA++    R  +   +I +  G Y E + V      I   G G  +T+I    R+   G       TY +A+       F A++++F NTA  PL G    QA A R S D + F   G +G QDTL   + R +F+ECYI G+IDFIFGN   ++++C +     +  +   I A  R  P + TG      R      +         Y+GR    YSR
Sbjct:  280 HLVVAQD--RSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIIT-SGRSVQHGYT-----TYNSATGGFGGQRFVAKDMTFINTA-GPLRG----QAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSR 505          

HSP 2 Score: 28.4906 bits (62), Expect = 1.388e-21
Identity = 9/27 (33.33%), Postives = 13/27 (48.15%), Query Frame = 1
Query:  952 PWASTREIVYSFLYFDNLVAPRGWG*W 1032
            PW +   +     Y DN ++P GW  W
Sbjct:  499 PWQAYSRVTIMKTYIDNSISPLGWSPW 525          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.454e-21
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKD 818
            +GSG+FK+VQ AV++ PE+N    +I I AG Y E+V +P  K  I   G G  +TVI ++              T  + +V V +  F A+ I FKNTA     G  G QA A R++GD+A    C F G QDTL  + GR +++   + G++DFIFG   ++ ++
Sbjct:  289 DGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSV----KLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA-----GPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQN 446          
The following BLAST results are available for this feature:
BLAST of DY263130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME12_ARATH2.929e-2229.29Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME47_ARATH3.721e-2229.71Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME34_ARATH3.826e-2230.29Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_FICAW3.826e-2227.62Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME_MEDSA4.996e-2231.00Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME44_ARATH4.996e-2229.29Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME59_ARATH8.523e-2231.54Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME18_ARATH8.523e-2227.62Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME33_ARATH1.388e-2131.80Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME5_ARATH1.454e-2137.13Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DE12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263130 ID=DY263130; Name=DY263130; organism=Citrus clementina; type=EST; length=1221bp
CAAATTTGTTCGGCTTATAAATGCTTCTCTCTTAAATTTCCAACTTCCAT
TGTACTTGCACTCATTCAATTAAATTTCTCGGAGCCTCTTCGAAAGCAGA
TTACACACGTTCTCTCTGACAATTTTAAATAATGCTGTTTAATTTAATGT
CATCTGTTACTTGTTTTTCGTTCTTTCACTTGTACATTGTTACTTCTTTC
TTGTCTCTTGCATTGTTTCAGGTTACGATCTCGGCCACAGCTCAAGCTGC
AAATTCTACTAAGCACCATCACATGTGGATTGGACCCGTCGGCCACCGTG
TAATCACCGTTGATGTTAATGGGTCCGGCGAGTTCAAATCGGTCCAAGCT
GCCGTTGATTCCGTCCCTGAAAGAAACAGAATGAACGTGCTTATTCAAAT
TAGCGCAGGTTGTTACATAGAGAAGGTGACGGTGCCAGTGTCGAAACCGT
ACATCACGTTTCAAGGTGCAGGGAGGGATCGGACGGTGATCGAGTGGCAT
GATCGAGCATGTGATCGTGGGGCTAATGGCCAGCAGCTGCGCACTTACCA
GACAGCTTCTGTAACTGTTTTTGCTAATTATTTCTCTGCTAGGAATATTA
GCTTCAAGAACACAGCGCCAGCACCACTACCAGGAATGCAAGGGTGGCAA
GCGGCGGCGTTTAGGATATCCGGAGACAAGGCTTACTTCTCAGGCTGTGG
ATTTTATGGGGCACAGGACACTCTTTGTGACGACGCAGGGCGGCATTACT
TCAAGGAATGTTACATTGAAGGCTCCATCGACTTTATTTTCGGGAATGGC
CGGTCCATGTACAAAGACTGTGAGCTGCATTCAATAGCCACAAGATTCGG
GTCAATTGCGGCCCACGATAGAAAATCGCCGGATGAGAAGACAGGATTTG
CTTTTGTACGATGCAGGGAAACGGGGACCGGCCCCATATATGTGGGCCGA
GCCATGGGCCAGTACTCGAGAAATTGTTTACTCATTCCTTTACTTTGACA
ACTTGGTTGCTCCACGGGGGTGGGGATGATGGGGACCACATCATAAACAA
AAACAAGACTGCCTTTTTTCCGAAGGGAAAAGTTGTTGGGGGGCCGGGAA
CAACAAAACCTTCCCGGGCGGGCCCCGGGGGCTAAAAAAACCGGGAATTA
AAAAAACCACCCCCCTCCTTTTTTTTTGGTAAAAAAGATTTTTTTACAGG
GGGGGAGGGGGCGTGGGGAAT
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