DY263130

Overview
NameDY263130
Unique NameDY263130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1221
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.899e-21
Identity = 72/244 (29.51%), Postives = 114/244 (46.72%), Query Frame = 3
Query:  285 PVGHRVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATR--FGSIAAHDRKSPDEKTGFAFVRCRET---------GTGPIYVGRAMGQYSRNCLL 983
            P  + V+  D  GSG FK+++ A+D+     R   +I +  G Y E + +   K  +  +G G  +T+I            G    T+ +A+V    + F AR I+F+NTA     G    QA A R   D + F  C F   QDTL   + R ++++C + G++DFIFGN  ++ ++C + +   R    +I A  R  P++ TG      R T         G+   Y+GR   QYSR   +
Sbjct:  203 PKDNAVVAKD--GSGNFKTIKEAIDAASGSGRF--VIYVKQGVYSENLEI--RKKNVMLRGDGIGKTIITGSKSV------GGGTTTFNSATVAAVGDGFIARGITFRNTA-----GASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRSKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFM 429          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.215e-21
Identity = 68/204 (33.33%), Postives = 102/204 (50.00%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKD----CELHSIATRFGSIAAHDRKSPDEKTGFAFVRCR 917
            +GSG+FK++  AV + PE+N    +I I AG Y E+VT+P     +   G G  +T+I + DR+           T  + +V V +  F A+ I F+NTA     G  G QA AFR++GD+A    C F G QDTL  + GR +++   + G++DFIFG   ++ ++    C   S        A  + K    K G     CR
Sbjct:  278 DGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITF-DRSVGLSPG---TTTSLSGTVQVESEGFMAKWIGFQNTA-----GPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCR 472          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.504e-20
Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS-------IAAHDRKSPDEKTGFAFVRCR 917
            +GSG+FK++  AV + P++N    +I I AG Y E+V +P  K  I   G G  +T+I + DR+           T  + +V V +  F A+ I FKNTA     G  G QA A R++GD+A    C F G QDTL  + GR +++   + G++DFIFG   ++ ++     I  R GS        A  + K    K G     CR
Sbjct:  282 DGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITF-DRSVKLSPG---TTTSLSGTVQVESEGFMAKWIGFKNTA-----GPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQN---SLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCR 476          

HSP 2 Score: 21.1718 bits (43), Expect = 2.504e-20
Identity = 9/34 (26.47%), Postives = 11/34 (32.35%), Query Frame = 1
Query:  952 PWASTREIVYSFLYFDNLVAPRGWG*WGPHHKQK 1053
            PW      V       +L+ P GW  W      K
Sbjct:  497 PWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHK 530          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 73/237 (30.80%), Postives = 119/237 (50.21%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPE--RNRMN-VLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIATRFGSIAAHDRKSPDEKTGFAFVRCR---------ETGTGPIYVGRAMGQYSRNCLL 983
            +GS   +++  A+ +V    ++R+N V+I I AG Y EK+ +      I   G G DRT++  ++R    G+      TY +A+  V  + F AR+I+F+NTA     G    QA A R+S D + F  C F G QDTL   + R ++++ +I G+IDFIFG+  +++++C++     +  +   I A  R  P   +G +    R           G    Y+GR   +YSR   L
Sbjct:  211 DGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVT-NNRNVPDGST-----TYGSATFGVSGDGFWARDITFENTA-----GPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFL 436          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.361e-19
Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS---IAAHDRKSPDEKTGFAFVRCRETGTGPI---------YVGRAMGQYSRNCLL 983
            + V  NG+G + ++  A+ + P  +    +I I  G Y E + +P  K  I F G G  RTVI+ +    D          + +A+V V  + F A+++SF N A     G +  QA A R S D + +  C F   QDT+   + + +++EC I G++DFIFG+   ++++C L++            A  R++  E TG + +  R      +         Y+GR    YSR  ++
Sbjct:  208 LVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWT------AFHSATVGVRGSGFIAKDLSFVNYA-----GPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIM 435          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME2_RALSO (Pectinesterase OS=Ralstonia solanacearum GN=pme PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.361e-19
Identity = 77/247 (31.17%), Postives = 112/247 (45.34%), Query Frame = 3
Query:  309 VDVNGSGEFKSVQAAVDS-VPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQG--AGRDRTVIEWHD-----------RACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAG------RHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAH----DRKSPDEKTGFAFVRCRETGTG-----PIYVGRAMGQ 962
            V  +GS ++K+VQAA+D+ V +       I + AG Y E V VP S P IT     A  + TVI +++             C   ++   + T ++A+  V A+ F+ARN++FKN+            A A  + GDKA        G QDTL   A       R YFK  +I+G  DFIFG G +++  C +   A R G+ A         +PD   GF  +      TG       ++GRA  Q
Sbjct:   82 VAADGSAQYKTVQAAIDAAVADGGVARKYISVKAGTYNELVCVPESAPPITLYSLDANANNTVIVYNNANPTPASGAKTNPCMGTSSNATVGTVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGDKAILENVSVIGNQDTLYLGATNNTMVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGARATSYVFAPSTAPDNPHGFLAINSTFNATGNASNNSTHLGRAWDQ 328          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.777e-19
Identity = 67/204 (32.84%), Postives = 101/204 (49.51%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKD----CELHSIATRFGSIAAHDRKSPDEKTGFAFVRCR 917
            +GSG+FK++  AV + PE+N    +I I AG Y E+VT+P     +   G G  +T+I + DR+           T  + +V V +  F A+ I F+NTA     G  G QA AFR++GD+A    C F G QDTL  + GR +++   + G++DFI G   ++ ++    C   S        A   +K    K G     CR
Sbjct:  265 DGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITF-DRSVGLSPG---TTTSLSGTVQVESEGFMAKWIGFQNTA-----GPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCR 459          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.321e-19
Identity = 63/236 (26.69%), Postives = 112/236 (47.46%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS-----IAAHDRKSPDEKTGFAFVRCRETGTG---------PIYVGRAMGQYSRNCLL 983
            +G+G+++++  AV + P++++   +I +  G Y E V V   K  +   G G   T+I  +    D         T+ +A++      F  ++I  +NTA     G    QA A R+  DK+  + C     QDTL   + R ++++ Y+ G+IDFIFGN   +++ C+L  +A + G      + A  R  P++ TG +   C    +          P Y+GR   +YSR  ++
Sbjct:  243 DGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGST------TFHSATLAAVGKGFILQDICIQNTA-----GPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKL--VARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVM 465          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 8.820e-19
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  303 ITVDVNGSGEFKSVQAAVDSVPERNRMN--VLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDC 821
            + V  +GSG FK+VQAA+D    R   +   +I +  G Y E + V ++   I   G G   T+I        R   G    TY +A+  +   +F A+ I+F+NTA  P  G    QA A R S D + F  C   G QDTL   + R +++ECYI G++DFIFGN   ++++C
Sbjct:  226 LVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITG-----GRSVKGGYT-TYSSATAGIEGLHFIAKGIAFQNTA-GPAKG----QAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNC 389          
BLAST of DY263130 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.965e-18
Identity = 63/236 (26.69%), Postives = 111/236 (47.03%), Query Frame = 3
Query:  318 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGS-----IAAHDRKSPDEKTGFAFVRCRETGTG---------PIYVGRAMGQYSRNCLL 983
            +G+G+++++  AV + P++++   +I +  G Y E V V   K  +   G G   T+I       D         T+ +A++      F  ++I  +NTA     G    QA A R+  DK+  + C     QDTL   + R ++++ Y+ G+IDFIFGN   +++ C+L  +A + G      + A  R  P++ TG +   C    +          P Y+GR   +YSR  ++
Sbjct:  243 DGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGST------TFHSATLAAVGKGFILQDICIQNTA-----GPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQL--VARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVM 465          
The following BLAST results are available for this feature:
BLAST of DY263130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME17_ARATH1.899e-2129.51Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_BRANA7.215e-2133.33Probable pectinesterase/pectinesterase inhibitor O... [more]
PME37_ARATH2.504e-2033.82Probable pectinesterase/pectinesterase inhibitor V... [more]
PME36_ARATH7.977e-2030.80Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME40_ARATH1.361e-1927.62Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME2_RALSO1.361e-1931.17Pectinesterase OS=Ralstonia solanacearum GN=pme PE... [more]
PME_BRACM1.777e-1932.84Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME22_SOLLC2.321e-1926.69Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME60_ARATH8.820e-1935.43Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME21_SOLLC1.965e-1826.69Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DE12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263130 ID=DY263130; Name=DY263130; organism=Citrus clementina; type=EST; length=1221bp
CAAATTTGTTCGGCTTATAAATGCTTCTCTCTTAAATTTCCAACTTCCAT
TGTACTTGCACTCATTCAATTAAATTTCTCGGAGCCTCTTCGAAAGCAGA
TTACACACGTTCTCTCTGACAATTTTAAATAATGCTGTTTAATTTAATGT
CATCTGTTACTTGTTTTTCGTTCTTTCACTTGTACATTGTTACTTCTTTC
TTGTCTCTTGCATTGTTTCAGGTTACGATCTCGGCCACAGCTCAAGCTGC
AAATTCTACTAAGCACCATCACATGTGGATTGGACCCGTCGGCCACCGTG
TAATCACCGTTGATGTTAATGGGTCCGGCGAGTTCAAATCGGTCCAAGCT
GCCGTTGATTCCGTCCCTGAAAGAAACAGAATGAACGTGCTTATTCAAAT
TAGCGCAGGTTGTTACATAGAGAAGGTGACGGTGCCAGTGTCGAAACCGT
ACATCACGTTTCAAGGTGCAGGGAGGGATCGGACGGTGATCGAGTGGCAT
GATCGAGCATGTGATCGTGGGGCTAATGGCCAGCAGCTGCGCACTTACCA
GACAGCTTCTGTAACTGTTTTTGCTAATTATTTCTCTGCTAGGAATATTA
GCTTCAAGAACACAGCGCCAGCACCACTACCAGGAATGCAAGGGTGGCAA
GCGGCGGCGTTTAGGATATCCGGAGACAAGGCTTACTTCTCAGGCTGTGG
ATTTTATGGGGCACAGGACACTCTTTGTGACGACGCAGGGCGGCATTACT
TCAAGGAATGTTACATTGAAGGCTCCATCGACTTTATTTTCGGGAATGGC
CGGTCCATGTACAAAGACTGTGAGCTGCATTCAATAGCCACAAGATTCGG
GTCAATTGCGGCCCACGATAGAAAATCGCCGGATGAGAAGACAGGATTTG
CTTTTGTACGATGCAGGGAAACGGGGACCGGCCCCATATATGTGGGCCGA
GCCATGGGCCAGTACTCGAGAAATTGTTTACTCATTCCTTTACTTTGACA
ACTTGGTTGCTCCACGGGGGTGGGGATGATGGGGACCACATCATAAACAA
AAACAAGACTGCCTTTTTTCCGAAGGGAAAAGTTGTTGGGGGGCCGGGAA
CAACAAAACCTTCCCGGGCGGGCCCCGGGGGCTAAAAAAACCGGGAATTA
AAAAAACCACCCCCCTCCTTTTTTTTTGGTAAAAAAGATTTTTTTACAGG
GGGGGAGGGGGCGTGGGGAAT
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